CV884343

Overview
NameCV884343
Unique NameCV884343
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: DJB11_MOUSE (DnaJ homolog subfamily B member 11 OS=Mus musculus GN=Dnajb11 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19
Identity = 50/139 (35.97%), Postives = 81/139 (58.27%), Query Frame = -2
Query:  422 KVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 838
            K++ E++ LEV +E G+++G +  F GE +   D   GD+ F ++  +H  F+R+GDDL+   T+SL EAL GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ K
Sbjct:  200 KLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHRIFERRGDDLYTNVTVSLVEALVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAK 336          
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: DJB11_BOVIN (DnaJ homolog subfamily B member 11 OS=Bos taurus GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.549e-18
Identity = 52/146 (35.62%), Postives = 85/146 (58.22%), Query Frame = -2
Query:  404 KVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFP-ESLSPDQCKMLETVL 838
            K++ E++ LEV +E G+++G +  F GE +   D   GD+ F ++  +H  F+R+GDDL+   T+SL E+L GF   ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP E LS +  + ++ +L
Sbjct:  200 KLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHSIFERRGDDLYTNVTISLVESLVGFDMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLSEEAREGIKQLL 343          
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: XDJ1_SCHPO (DnaJ protein homolog xdj1 OS=Schizosaccharomyces pombe GN=xdj1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18
Identity = 54/160 (33.75%), Postives = 83/160 (51.88%), Query Frame = -2
Query:  374 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF-QFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQCKMLETVLPPRTSVQLTD 844
            G   + E+++L   V +  +   KI   G ADEA     GD++  L QK HP F+R GDDL  +  +SL EAL GF + ++T LDGR L      G+++ P     I  EGM    +  +RG LY+   ++FP+   +   + ++L  +LP    V + D
Sbjct:  212 GSGTVPEQRMLSFFVNRSAKENDKIIQRGMADEAYGITPGDVILQLHQKPHPVFERLGDDLKAKLKISLAEALTGFNRVILTTLDGRGLEYVQPIGKILHPGDCLIIPGEGMYKDSKTDLRGDLYLEVDIEFPKDGLIGTTEIEILRDILPSIPKVSVMD 371          
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: SIS1_YEAST (Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17
Identity = 53/140 (37.86%), Postives = 77/140 (55.00%), Query Frame = -2
Query:  413 EKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIV-FVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQL-LIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 826
            EK  +++ ++ G + G KIT+  + D  P T     + FV+Q+K HP FKR GDDL     LS  E+L GF   I  +DGR L L + QP   V+P Q      +GMP  + P  RG L + + VD+P SL+  Q + ++
Sbjct:  213 EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQP---VQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 349          
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEBR (DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=dnj-20 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.827e-16
Identity = 56/166 (33.73%), Postives = 81/166 (48.80%), Query Frame = -2
Query:  422 KVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKF---------------------------KRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 838
            K++QE KVLEV VE G   G    F GE +   +   GD+ F ++ ++HP+F                           +RKGDDL+   T+SL +AL GF+  I HLDG   ++K Q  +V  P       DEGMP  +    +G L + F V+FP++   D+ K
Sbjct:  199 KLVQENKVLEVEVEVGADEGHTQIFHGEGEPHIEGDPGDLKFKIRIQKHPRFLISVTGIEIIELKVDELVELLLEGIRFERKGDDLYTNVTISLQDALNGFEMEILHLDGH--MVKVQRDKVTWPGARLRKKDEGMPSMENNNKKGMLIVTFDVEFPKTELTDEQK 362          
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: DNAJ_BARQU (Chaperone protein dnaJ OS=Bartonella quintana GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.710e-14
Identity = 47/145 (32.41%), Postives = 79/145 (54.48%), Query Frame = -2
Query:  413 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 844
            G + +++ + L V +  G+++G +I   GE D        GD+   L  K H  F+R+G DL     LS+  A  G +F ++ LDG +  +K   G      QF+ +  +GMPM +R  +RG LYIH T++ P+ L+ +Q ++L+
Sbjct:  206 GTRRVEKNRSLSVNIPAGIEDGTRIRLSGEGDAGIRGGPNGDLYIFLSVKPHEFFQREGADLHCRIPLSMVTAALGGEFEVSDLDGIKARVKIPEG-TQNGRQFR-LKGKGMPMLRRQQVRGDLYIHITIETPQKLTQEQRELLQ 348          
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: SPJ1_SCHPO (DnaJ-related protein spj1 OS=Schizosaccharomyces pombe GN=spj1 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.974e-14
Identity = 54/169 (31.95%), Postives = 85/169 (50.30%), Query Frame = -2
Query:  359 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHP-KFKRKGDDLFVEHTLSLTEALCG-FQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMY-----QRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDE 844
            GE+V +  +  ++ V  G   G +I F G+ADE P    GDI+ +L+       + RK +DL+ + T+S+ EAL G ++  I  LDG  + +K   GEVV P + + + ++GMP+Y     +     G  YI + V FP+ L     K L  +       +  D E DE
Sbjct:  218 GERVAEVVESFDIKVPAGAPEGYRIGFRGKADEIPGMEAGDIIVILEAAGGDYGWTRKDNDLYRKETISVREALLGNWKRKIQKLDGSFMEVKRSAGEVVHPGETERVKNQGMPIYNLHKGKTTSAHGSAYIEWEVKFPKKLKGKFLKDLNNLF------EKYDNEFDE 380          
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: DNAJ_BARHE (Chaperone protein dnaJ OS=Bartonella henselae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.108e-13
Identity = 45/145 (31.03%), Postives = 79/145 (54.48%), Query Frame = -2
Query:  413 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 844
            G + +++ + L V +  G+++  +I   GE D       +GD+   L  K H  F+R+G DL     +S+  A  G +F ++ LDG +  +K   G      QF+ +  +GMPM +R  +RG LYIH T++ P+ L+ +Q ++L+
Sbjct:  206 GTRRVEKNRSLSVNIPAGIEDSTRIRLSGEGDAGIRGGPSGDLYIFLSVKPHEFFQREGADLHCRVPISMVTAALGGEFEVSDLDGIKARVKIPEG-TQNGRQFR-LKGKGMPMLRRQQVRGDLYIHITIETPQKLTQEQRELLQ 348          
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: APJ1_YEAST (J domain-containing protein APJ1 OS=Saccharomyces cerevisiae GN=APJ1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.890e-13
Identity = 46/156 (29.49%), Postives = 78/156 (50.00%), Query Frame = -2
Query:  404 IQEKKVLEVIVEKGMQNGQKITFPGEADEAPDT--------VTGDIVFVLQQKEHPKFK--RKGDDLFVEHTLSLTEALCG-FQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMR--GKLYIHFTVDFPESLSPDQCKMLETVL 832
            I+E+K+L+V V+ G  + Q I   GE DE   T        + GD+V  + + + P F+     + +  +  +    +LCG   ++  H  G+ + +   PGE++KP  FK + D GMP +        G LY+ F V +PE L P+  K ++ +L
Sbjct:  271 IKERKILQVTVQPGSCHNQLIVLTGEGDEVISTKGGGHEKVIPGDVVITILRLKDPNFQVINYSNLICKKCKIDFMTSLCGGVVYIEGHPSGKLIKLDIIPGEILKPGCFKTVEDMGMPKFINGVRSGFGHLYVKFDVTYPERLEPENAKKIQNIL 426          
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBP (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.090e-12
Identity = 38/145 (26.21%), Postives = 81/145 (55.86%), Query Frame = -2
Query:  413 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDT-VTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 844
            GE + ++++ + + +  G+++G ++   GE +  P+   +GD+  V   K+HP F+R+G+DL V+ ++SL+ A  G +  +  +DG+ + +K   G   +  Q   +   G+P Y   + +G  ++   V+ P+ LS  Q +++E
Sbjct:  213 GEGLTEKRRTIHIKIPAGVESGSRLKVSGEGESGPNGGPSGDLYVVTHIKKHPVFERQGNDLIVQKSISLSMACLGGEIEVPSIDGKTIQLKIPEG--TESGQIFRLKGHGIP-YLGSYGKGDQHVIIKVEIPKKLSKKQKELME 354          
The following BLAST results are available for this feature:
BLAST of CV884343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
DJB11_MOUSE6.708e-1935.97DnaJ homolog subfamily B member 11 OS=Mus musculus... [more]
DJB11_BOVIN2.549e-1835.62DnaJ homolog subfamily B member 11 OS=Bos taurus G... [more]
XDJ1_SCHPO3.329e-1833.75DnaJ protein homolog xdj1 OS=Schizosaccharomyces p... [more]
SIS1_YEAST2.158e-1737.86Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 P... [more]
DNJ20_CAEBR1.827e-1633.73DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=... [more]
DNAJ_BARQU1.710e-1432.41Chaperone protein dnaJ OS=Bartonella quintana GN=d... [more]
SPJ1_SCHPO4.974e-1431.95DnaJ-related protein spj1 OS=Schizosaccharomyces p... [more]
DNAJ_BARHE1.108e-1331.03Chaperone protein dnaJ OS=Bartonella henselae GN=d... [more]
APJ1_YEAST1.890e-1329.49J domain-containing protein APJ1 OS=Saccharomyces ... [more]
DNAJ_LEPBP2.090e-1226.21Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002G09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T7_G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884343 ID=CV884343; Name=CV884343; organism=Citrus sinensis; type=EST; length=845bp
TTTTTTTTTTGTAACACTAAAAATATTAATTATGAGCATTGAGTCTGAAG
GTGCAACGCTAGAATTCCATTACATAGTCAGTTATCAGAAAAACATAAGA
ATAAAGACAGACAAACCAAAACTAGAACCTCTAAAGCCTATAACAGAAAA
TAAATATGTTGAGAATCTTTTTCTCCCAAACAATGAAAATACTAAATCAG
GCCACCCCTTTTCTTCTACATCATCACTGCTGAGCACACTGCACTCTCTG
GGCACCACCTTGCATATCGTCATCTTCATCGTATGCCTCCTGAGCTGCTT
GTTGCTTCCTTCGCATTTCCTCCTCAATGTTCACATCATGCAGGGTTGTT
TCTTCACACTCATCCAGTTCCATATCGGTGAGCTGGACTGAGGTCCTTGG
AGGTAGTACGGTCTCCAGCATCTTGCACTGGTCTGGGCTCAGTGACTCAG
GGAAGTCAACAGTGAAATGAATGTACAGTTTGCCCCTCATAAATGGCCTC
TGATACATAGGCATTCCTTCATCATTTATGGCCTTGAATTGGTCCGGCTT
GACTACTTCCCCAGGCTGGGATTTGATGAGGAGTTGCCGGCCATCCAAAT
GAGTTATTACAAATTGAAAGCCACAGAGAGCTTCTGTCAGTGACAGGGTG
TGCTCAACAAATAGGTCATCACCCTTTCGCTTAAATTTCGGGTGCTCTTT
CTGTTGTAGAACAAATACAATGTCACCTGTGACAGTGTCGGGCGCTTCAT
CAGCTTCTCCAGGGAACGTAATCTTCTGTCCATTTTGCATCCCCTTCTCA
ACAATAACCTCCAAGACTTTTTTCTCCTGAATGACCTTCTCACCC
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