CV884342

Overview
NameCV884342
Unique NameCV884342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLT2 (Chaperone protein dnaJ OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.909e-15
Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 1
Query:   55 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGED 243
            YY ILGV+K A+ +++KKAYRK A+K HPDK  GD E   +FKE+++AYEVL D +KRE YD+YG+D
Sbjct:    3 YYTILGVAKTATPEEIKKAYRKLAVKYHPDKNPGDAEAERRFKEVSEAYEVLGDAQKRESYDRYGKD 69          
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLMU (Chaperone protein dnaJ OS=Chlamydia muridarum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.909e-15
Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 1
Query:   55 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGED 243
            YY ILGV+K A+ +++KKAYRK A+K HPDK  GD E   +FKE+++AYEVL D +KRE YD+YG+D
Sbjct:    3 YYTILGVAKTATPEEIKKAYRKLAVKYHPDKNPGDAEAERRFKEVSEAYEVLGDAQKRESYDRYGKD 69          
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: DNAJ_BURS3 (Chaperone protein dnaJ OS=Burkholderia sp. (strain 383) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.909e-15
Identity = 39/65 (60.00%), Postives = 49/65 (75.38%), Query Frame = 1
Query:   55 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG 237
            YYE+LGV+KNA  D++KKAYRK A+K HPD+  D     E FKE+ +AYE+LSD +KR  YDQYG
Sbjct:    6 YYEVLGVAKNAGDDEIKKAYRKLAMKYHPDRNPDNKDAEEHFKEVKEAYEMLSDGQKRAAYDQYG 70          
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: DJB13_MOUSE (DnaJ homolog subfamily B member 13 OS=Mus musculus GN=Dnajb13 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.909e-15
Identity = 53/162 (32.72%), Postives = 75/162 (46.30%), Query Frame = 1
Query:   55 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG---GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXE--------------------------DVIHPLKVSLEDLYNGTSKKLSLSRNVI 453
            YY +L V++N+    +KKAYRK A+KNHP K    G PE FK++A+AY+VLSDP KR IYD++GE+ LK        +  P+                         E                           +   L +SLEDL+ G +KK+ +SR V+
Sbjct:    5 YYAVLQVTRNSEDAQIKKAYRKLALKNHPLKSSEPGAPEIFKQIAEAYDVLSDPVKRGIYDKFGEEGLKGGIPLEFGSQTPWTTGYVFHGNPDKVFHEFFGGDNPFSEFFDAEGNDIDLNFGGLWGRGVQKQDPPIERDLYLSLEDLFFGCTKKIKISRRVL 166          
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: DNJB8_HUMAN (DnaJ homolog subfamily B member 8 OS=Homo sapiens GN=DNAJB8 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.800e-15
Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 1
Query:   55 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFD 294
            YYE+LGV  +AS +D+KKAYRK A++ HPDK  D      +KFK +++AYEVLSD +KR +YD+ G D+ +         H PFD
Sbjct:    4 YYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAGGGASTPYHSPFD 88          
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: DNAJ_PARUW (Chaperone protein dnaJ OS=Protochlamydia amoebophila (strain UWE25) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.800e-15
Identity = 39/70 (55.71%), Postives = 57/70 (81.43%), Query Frame = 1
Query:   55 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG---GDPEK-FKELAQAYEVLSDPEKREIYDQYGEDALK 252
            YYEIL V++ A+ +++KKAYRK A++ HPDK     D EK FKE+++AYEVLSD +KR++YD+YG++AL+
Sbjct:    4 YYEILEVARGATPEEIKKAYRKKAVQYHPDKNPGDADAEKRFKEISEAYEVLSDEKKRQVYDRYGKEALQ 73          
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: APJ1_YEAST (J domain-containing protein APJ1 OS=Saccharomyces cerevisiae GN=APJ1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.800e-15
Identity = 48/155 (30.97%), Postives = 76/155 (49.03%), Query Frame = 1
Query:  370 DVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDT--------VTGDIVFVLQQKEHPKFK 810
            D+ H LK +L++LY G + KL L+R  I                    +G G++   R +GP ++Q     C +C G G  + +KD C QC+G   I+E+K+L+V V+ G  + Q I   GE DE   T        + GD+V  + + + P F+
Sbjct:  178 DIKHNLKCTLKELYMGKTAKLGLNRTRICSVCDGHGGLKKCTCKTC--KGQGIQTQTRRMGP-LVQSWSQTCADCGGAGVFVKNKDICQQCQGLGFIKERKILQVTVQPGSCHNQLIVLTGEGDEVISTKGGGHEKVIPGDVVITILRLKDPNFQ 329          

HSP 2 Score: 71.2478 bits (173), Expect = 8.760e-12
Identity = 35/68 (51.47%), Postives = 44/68 (64.71%), Query Frame = 1
Query:   46 NTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPEKREIYDQYG 237
            NT  Y+ L V+  AS  ++KKAYR AA+K HPDK    E    KF+E+ QAYE+L D   R +YDQYG
Sbjct:    4 NTSLYDSLNVTAAASTSEIKKAYRNAALKYHPDKNNHTEESKRKFQEICQAYEILKDNRLRALYDQYG 71          
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: DNJB7_HUMAN (DnaJ homolog subfamily B member 7 OS=Homo sapiens GN=DNAJB7 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 39/70 (55.71%), Postives = 53/70 (75.71%), Query Frame = 1
Query:   55 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE-----KFKELAQAYEVLSDPEKREIYDQYGEDAL 249
            YYE+LG+ + AS +D+KKAY K A+K HPDK  + +     KFKE+A+AYEVLS+ EKR+IYD+YG + L
Sbjct:    4 YYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGL 73          
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: DNJB3_MACFU (DnaJ homolog subfamily B member 3 OS=Macaca fuscata fuscata GN=DNAJB3 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 1
Query:   55 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE-----KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFD 294
            YYE+LGV      +D+KKAYRK A+K HPDK  D +     +FK++A+AYEVLSD +KR++YD+YGE   +          DPF+
Sbjct:    4 YYEVLGVQVQRFPEDIKKAYRKLALKWHPDKNPDNKEEAERRFKQVAEAYEVLSDAKKRDVYDRYGEAGAEGSCAVGRPFEDPFE 88          
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPCP (Chaperone protein dnaJ OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 40/67 (59.70%), Postives = 51/67 (76.12%), Query Frame = 1
Query:   55 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD-----PEKFKELAQAYEVLSDPEKREIYDQYG 237
            YYE+LGV K AS+D++KKAYRK A+K+HPD+  GD      EKFKE  +AYE+LSD +KR  YDQ+G
Sbjct:    6 YYEVLGVGKTASEDEIKKAYRKLAMKHHPDRNQGDGAKASEEKFKEAKEAYEMLSDAQKRAAYDQFG 72          
The following BLAST results are available for this feature:
BLAST of CV884342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_CHLT22.909e-1559.70Chaperone protein dnaJ OS=Chlamydia trachomatis (s... [more]
DNAJ_CHLMU2.909e-1559.70Chaperone protein dnaJ OS=Chlamydia muridarum GN=d... [more]
DNAJ_BURS32.909e-1560.00Chaperone protein dnaJ OS=Burkholderia sp. (strain... [more]
DJB13_MOUSE2.909e-1532.72DnaJ homolog subfamily B member 13 OS=Mus musculus... [more]
DNJB8_HUMAN3.800e-1548.24DnaJ homolog subfamily B member 8 OS=Homo sapiens ... [more]
DNAJ_PARUW3.800e-1555.71Chaperone protein dnaJ OS=Protochlamydia amoebophi... [more]
APJ1_YEAST3.800e-1530.97J domain-containing protein APJ1 OS=Saccharomyces ... [more]
DNJB7_HUMAN4.963e-1555.71DnaJ homolog subfamily B member 7 OS=Homo sapiens ... [more]
DNJB3_MACFU4.963e-1547.06DnaJ homolog subfamily B member 3 OS=Macaca fuscat... [more]
DNAJ_LEPCP4.963e-1559.70Chaperone protein dnaJ OS=Leptothrix cholodnii (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002G09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T3_G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884342 ID=CV884342; Name=CV884342; organism=Citrus sinensis; type=EST; length=895bp
ATTTTTTAGTACAAGATGTTCGGAAGAGCGCCAAAGAAAAGCGATAACAC
AAAGTACTATGAGATTCTCGGAGTCTCAAAAAACGCTTCGCAAGATGATC
TGAAGAAGGCTTATAGGAAAGCCGCCATCAAAAACCATCCTGACAAGGGC
GGTGATCCTGAGAAGTTTAAAGAGTTGGCACAAGCGTATGAGGTTCTGAG
TGACCCAGAGAAGCGTGAAATATATGATCAATACGGCGAGGATGCGCTTA
AAGAGGGAATGGGTGGTGGTGGTGGTGCCCATGACCCATTCGACATATTC
CAATCCTTCTTCGGTGGCAGCCCATTTGGTGGTGGGAGCAGCAGAGGAAG
AAGGCAAAGGAGGGGAGAGGATGTAATCCATCCCCTCAAGGTTTCTTTGG
AGGATCTCTACAATGGGACATCTAAGAAGCTCTCGCTCTCCCGCAATGTA
ATCTGCACCAAGTGCAAAGGGAAGGGGTCTAAGTCAGGTGCATCAATGAA
ATGTTCTGGCTGCCAGGGATCTGGAATGAAAGTTTCAATAAGACACCTTG
GCCCCTCTATGATTCAACAAATGCAGCATCCTTGCAATGAGTGCAAGGGT
ACTGGAGAAACAATCAATGACAAGGATCGCTGCCCACAATGTAAGGGTGA
GAAGGTCATTCAGGAGAAAAAAGTCTTGGAGGTTATTGTTGAGAAGGGGA
TGCAAAATGGACAGAAGATTACGTTCCCTGGAGAAGCTGATGAAGCGCCC
GACACTGTCACAGGTGACATTGTATTTGTTCTACAACAGAAAGAGCACCC
GAAATTTAAGCGAAAGGGTGATGACCTATTTGTTGAGCACACCCTGTCAC
TGACAGAAGCTCTCTGTGGCTTTCAATTTGTAATAACTCATTTGG
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