CV884342

Overview
NameCV884342
Unique NameCV884342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: DNAJ_DEIPR (Chaperone protein dnaJ OS=Deinococcus proteolyticus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.482e-15
Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 1
Query:   55 YYEILGVSKNASQDDLKKAYRKAAIKNHPDK-GGD---PEKFKELAQAYEVLSDPEKREIYDQYG 237
            YYE+LGVS++AS  D+K AYRK A + HPDK  GD    EKFKE+ +AY VLSDP+KR+ YDQ+G
Sbjct:    6 YYEVLGVSRSASDSDIKSAYRKLAKQYHPDKNAGDESAAEKFKEIGEAYAVLSDPQKRQAYDQFG 70          
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAA5 (Chaperone protein dnaJ OS=Cyanothece sp. (strain ATCC 51142) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.482e-15
Identity = 72/286 (25.17%), Postives = 115/286 (40.21%), Query Frame = 1
Query:   55 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALK-------EXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKL---SLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCG 870
            YY+ILGV +NAS++DLK+AYR+ A K HPD   +P   E+FKE+ +AYEVLS+P+ R  YDQ+GE  +                  D F+                        +D+   LK+   +   G  K++    L    +                    QG   + +    G          CN   G G+ I +K  C  C G    Q  + +++ +  G+ +G ++    + D        GD+   L  +    F R   ++  E T+S  +A+ G
Sbjct:    5 YYDILGVDRNASKEDLKRAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPDTRSRYDQFGEAGVSGAGGFNYGDMGDMGGFADIFETIFSGFGGGMGTGGTRRRTGPVKGDDLRLDLKLDFREAVFGGEKEIRIPHLETCQVCKGDGAKPGTGAKTCSTCNGQGQVRRATRTPFGSFAQVSACPACN---GQGQVIEEK--CEVCNGAGRRQVTEKVKITIPAGVDDGTRLRVSRKGDAGLRGGPQGDLYVYLYVEPDKVFTRDKMNILSEITISYLQAILG 285          
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTE (Chaperone protein dnaJ OS=Chlorobium tepidum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.482e-15
Identity = 39/65 (60.00%), Postives = 51/65 (78.46%), Query Frame = 1
Query:   55 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG 237
            YYEILGV+++A +D++KKAYRK A+K HPDK  D     EKFKE+ +AYEVLS+ +KR  YDQ+G
Sbjct:    5 YYEILGVARSADKDEIKKAYRKLALKYHPDKNPDNKEAEEKFKEVNEAYEVLSNDDKRRRYDQFG 69          

HSP 2 Score: 77.7962 bits (190), Expect = 9.359e-14
Identity = 46/173 (26.59%), Postives = 80/173 (46.24%), Query Frame = 1
Query:  385 LKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQH--PCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHL 894
            LK++LE++  G  K + + + V                      GSG    +R    +M  Q  +   C  C G G  +  KDRCP C GE + Q +  +++ V  G+Q+G  +T  G+ +  P     GD++ V+++K H  FKR GDD+  + ++   + + G +  +  L
Sbjct:  149 LKLTLEEIAKGVEKTIKIKKLVTCRECNGTGSKSGKTEICPTCHGSG---EVRQATKTMFGQFMNISVCPTCGGEGRVV--KDRCPSCYGEGIKQGEATVKITVPAGVQDGNYLTLQGQGNAGPRGGAPGDLIVVIEEKPHELFKRNGDDIIYDLSVGFPDLVMGTKIEVPTL 316          
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: DNAJ_BURP8 (Chaperone protein dnaJ OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.465e-15
Identity = 38/65 (58.46%), Postives = 49/65 (75.38%), Query Frame = 1
Query:   55 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG----GDPEKFKELAQAYEVLSDPEKREIYDQYG 237
            YY++LGV+KNAS D++KKAYRK A+K+HPD+        E FKE  +AYE+LSD +KR  YDQYG
Sbjct:    6 YYQVLGVAKNASDDEIKKAYRKLAMKHHPDRNPGNKDAEEHFKEAKEAYEMLSDSQKRAAYDQYG 70          
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: DNJB3_HUMAN (DnaJ homolog subfamily B member 3 OS=Homo sapiens GN=DNAJB3 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14
Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 1
Query:   55 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE-----KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFD 294
            YYE+L V + AS + +KKAYRK A+K HPDK  + +     +FK++A+AYEVLSD +KR+IYD+YGE   +          DPF+
Sbjct:    4 YYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCTGGRPFEDPFE 88          
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: DNAJ_ANATD (Chaperone protein dnaJ OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14
Identity = 38/68 (55.88%), Postives = 52/68 (76.47%), Query Frame = 1
Query:   55 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDA 246
            YYEILGV +NA+++++K+AYR+ A + HPD         EKFKE+ +AYEVLSDPEKR++YDQ+G  A
Sbjct:    7 YYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDPEKRKLYDQFGHAA 74          
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: PSI1_SCHPO (Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 39/65 (60.00%), Postives = 51/65 (78.46%), Query Frame = 1
Query:   46 NTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE-KFKELAQAYEVLSDPEKREIYDQYG 237
            +TK Y+ L V   AS+ +LKKAYRK A+K HPDK  + E KFKE++ AYEVLSDP++R++YDQYG
Sbjct:    4 DTKLYDCLEVRPEASEAELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEVLSDPQRRKLYDQYG 68          

HSP 2 Score: 72.0182 bits (175), Expect = 5.136e-12
Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 1
Query:  658 IQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF 873
            ++  ++LE+ V+ G + G KI F GE DE PD    DI FVL +K HP F R GDDL ++  LSL EAL GF
Sbjct:  240 VKADRILEIKVKPGWKAGTKIKFAGEGDEKPDGTVQDIQFVLAEKPHPVFTRSGDDLRMQVELSLKEALLGF 311          
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOTN (Chaperone protein dnaJ OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 39/64 (60.94%), Postives = 50/64 (78.12%), Query Frame = 1
Query:   55 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYG 237
            YYE+LGVSKNA++D++KKAYRK + + HPD    P   EKFKE+ +AYEVLSD EKR  YD++G
Sbjct:    6 YYEVLGVSKNATKDEIKKAYRKLSKQYHPDINKAPDAAEKFKEIKEAYEVLSDDEKRARYDRFG 69          
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: DNAJ_PROA2 (Chaperone protein dnaJ OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.886e-14
Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = 1
Query:   55 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG 237
            YYE+LGV ++A++D++KKAYRK A+K HPDK  D     EKFKE  +AYEVLS+ +KR  YDQ+G
Sbjct:    5 YYEVLGVGRSATKDEIKKAYRKLAMKYHPDKNPDNSEAEEKFKEANEAYEVLSNDDKRRRYDQFG 69          

HSP 2 Score: 75.8702 bits (185), Expect = 3.557e-13
Identity = 46/165 (27.88%), Postives = 78/165 (47.27%), Query Frame = 1
Query:  385 LKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQH--PCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCG 870
            LK+SLE++  G  K L + + V                     QG+G    +R    +M  Q  +   C  C G G  +  K+RC  C GE + Q +  ++V +  G+++G  +T  G+ +  P   + GD++ V+++ EH  F R+GDD+    TLS  + + G
Sbjct:  142 LKLSLEEIAKGVEKTLKIKKQVACDVCNGTGSKTGELETCPTCQGTG---EVRQASKTMFGQFVNIAACPTCGGEGRVV--KERCTACHGEGIKQGETTVKVNIPAGVEDGNYLTLRGQGNAGPRGGMNGDLIVVIEEVEHKIFARRGDDVVYNLTLSYADMVLG 301          
BLAST of CV884342 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLL2 (Chaperone protein dnaJ OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.886e-14
Identity = 38/65 (58.46%), Postives = 51/65 (78.46%), Query Frame = 1
Query:   55 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG 237
            YYE+LGVS++AS+D++KKAYRK A++ HPDK  D     E FKE+ +AYEVLS+ +KR  YDQ+G
Sbjct:    5 YYEVLGVSRSASKDEIKKAYRKLALQYHPDKNPDNKDAEEHFKEVNEAYEVLSNDDKRRRYDQFG 69          

HSP 2 Score: 73.559 bits (179), Expect = 1.765e-12
Identity = 45/165 (27.27%), Postives = 75/165 (45.45%), Query Frame = 1
Query:  385 LKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQH--PCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCG 870
            LK++LE++  G  K L + + ++                     GSG    +R    +M  Q  +   C  C G G  +  KDRC  C GE + Q    ++V V  G+Q+G  +T  G+ +  P     GD++ V+++K H  F+R G+D+     LS  + + G
Sbjct:  146 LKLTLEEIAKGVEKTLKIKKQIVCKECNGSGSKTGATEPCQTCHGSG---EVRQASKTMFGQFVNITACPTCGGEGRVV--KDRCTACYGEGIKQGDVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFRRDGNDVIFNLALSYPDLVLG 305          
The following BLAST results are available for this feature:
BLAST of CV884342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_DEIPR6.482e-1561.54Chaperone protein dnaJ OS=Deinococcus proteolyticu... [more]
DNAJ_CYAA56.482e-1525.17Chaperone protein dnaJ OS=Cyanothece sp. (strain A... [more]
DNAJ_CHLTE6.482e-1560.00Chaperone protein dnaJ OS=Chlorobium tepidum GN=dn... [more]
DNAJ_BURP88.465e-1558.46Chaperone protein dnaJ OS=Burkholderia phymatum (s... [more]
DNJB3_HUMAN1.106e-1447.06DnaJ homolog subfamily B member 3 OS=Homo sapiens ... [more]
DNAJ_ANATD1.106e-1455.88Chaperone protein dnaJ OS=Anaerocellum thermophilu... [more]
PSI1_SCHPO1.444e-1460.00Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 ... [more]
DNAJ_GEOTN1.444e-1460.94Chaperone protein dnaJ OS=Geobacillus thermodenitr... [more]
DNAJ_PROA21.886e-1458.46Chaperone protein dnaJ OS=Prosthecochloris aestuar... [more]
DNAJ_CHLL21.886e-1458.46Chaperone protein dnaJ OS=Chlorobium limicola (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002G09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T3_G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884342 ID=CV884342; Name=CV884342; organism=Citrus sinensis; type=EST; length=895bp
ATTTTTTAGTACAAGATGTTCGGAAGAGCGCCAAAGAAAAGCGATAACAC
AAAGTACTATGAGATTCTCGGAGTCTCAAAAAACGCTTCGCAAGATGATC
TGAAGAAGGCTTATAGGAAAGCCGCCATCAAAAACCATCCTGACAAGGGC
GGTGATCCTGAGAAGTTTAAAGAGTTGGCACAAGCGTATGAGGTTCTGAG
TGACCCAGAGAAGCGTGAAATATATGATCAATACGGCGAGGATGCGCTTA
AAGAGGGAATGGGTGGTGGTGGTGGTGCCCATGACCCATTCGACATATTC
CAATCCTTCTTCGGTGGCAGCCCATTTGGTGGTGGGAGCAGCAGAGGAAG
AAGGCAAAGGAGGGGAGAGGATGTAATCCATCCCCTCAAGGTTTCTTTGG
AGGATCTCTACAATGGGACATCTAAGAAGCTCTCGCTCTCCCGCAATGTA
ATCTGCACCAAGTGCAAAGGGAAGGGGTCTAAGTCAGGTGCATCAATGAA
ATGTTCTGGCTGCCAGGGATCTGGAATGAAAGTTTCAATAAGACACCTTG
GCCCCTCTATGATTCAACAAATGCAGCATCCTTGCAATGAGTGCAAGGGT
ACTGGAGAAACAATCAATGACAAGGATCGCTGCCCACAATGTAAGGGTGA
GAAGGTCATTCAGGAGAAAAAAGTCTTGGAGGTTATTGTTGAGAAGGGGA
TGCAAAATGGACAGAAGATTACGTTCCCTGGAGAAGCTGATGAAGCGCCC
GACACTGTCACAGGTGACATTGTATTTGTTCTACAACAGAAAGAGCACCC
GAAATTTAAGCGAAAGGGTGATGACCTATTTGTTGAGCACACCCTGTCAC
TGACAGAAGCTCTCTGTGGCTTTCAATTTGTAATAACTCATTTGG
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