CV884338

Overview
NameCV884338
Unique NameCV884338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 325.479 bits (833), Expect = 2.421e-88
Identity = 160/243 (65.84%), Postives = 185/243 (76.13%), Query Frame = -2
Query:  133 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 861
            VVDGSTTF SAT+A  G+ F+A+D+  QNTAGP KHQAVALRV +D S    C + AYQDTLY H+NRQF+  C I GTVDFIFGNAAVVLQ+C I AR+P S Q NMVTAQGRTDPNQNTG  IQKC + A+SDL+ VKGS  +YLGRPWKEYS+TV+MQS I D I P GWSEW+G FAL TL Y EY N G GAGT+ RVKW G+ VIT   EA+K+T  + IGGG WL STG  ++ GL
Sbjct:  350 VVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYNCDMLAYQDTLYVHSNRQFFVKCLIAGTVDFIFGNAAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKWRGFKVITAAAEAQKYTAGQFIGGGGWLSSTGFPFSLGL 592          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 323.939 bits (829), Expect = 7.045e-88
Identity = 159/243 (65.43%), Postives = 182/243 (74.90%), Query Frame = -2
Query:  133 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 861
            VVDGSTTF SAT+A  G+ F+A+D+  QNTAGP KHQAVALRV +D S   +C + AYQDTLY H+NRQF+  C ITGTVDFIFGNAA VLQ+C I AR+P S Q NMVTAQGR+DPNQNTG  IQ C +  +SDL  VKG+  +YLGRPWKEYSRTV+MQS I D I P GW EWSG FAL TL Y EYLNRG GAGT+ RVKW GY VIT   EA+ FT  + IGGG WL STG  ++  L
Sbjct:  345 VVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNAAAVLQDCDINARRPNSGQKNMVTAQGRSDPNQNTGIVIQNCRIGGTSDLLAVKGTFPTYLGRPWKEYSRTVIMQSDISDVIRPEGWHEWSGSFALDTLTYREYLNRGGGAGTANRVKWKGYKVITSDTEAQPFTAGQFIGGGGWLASTGFPFSLSL 587          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 5.964e-87
Identity = 153/243 (62.96%), Postives = 179/243 (73.66%), Query Frame = -2
Query:  133 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 861
            + D  TTF +A+ A  G GFIA+D+  +N AGP KHQAVALR+ AD +VI RC I  YQDTLY H+NRQF+R+CDI GTVDFIFGNAAVVLQNC I ARKPM  Q N +TAQ R DPNQNTG SI    V+A+SDL+   GS ++YLGRPWK +SRTV M S+IG H+   GW EW+  FAL TLYYGEYLN GPG+G  +RV WPGY VI    EA +FTVAE I G SWL STGV++  GL
Sbjct:  354 IFDNITTFHTASFAATGAGFIARDITFENWAGPAKHQAVALRIGADHAVIYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMMSYIGGHVHTRGWLEWNTTFALDTLYYGEYLNSGPGSGLGQRVSWPGYRVINSTAEANRFTVAEFIYGSSWLPSTGVSFLAGL 596          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 2.506e-85
Identity = 152/240 (63.33%), Postives = 177/240 (73.75%), Query Frame = -2
Query:  142 VDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVK-GSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYT 858
            VDG TTF+SAT AV G GFIA+D+  +NTAGPEKHQAVALR  +D SV  RC I  YQDTLY HT RQFYRDC I+GTVDFIFG+A VV QNC+I A+K +  Q N +TAQGR DPN+ TG SIQ C + A SDLE     S  +YLGRPWK YSRTV+MQS + + I P GW EW+GDFAL +L+YGEY+N GPGAG   RVKWPGY V  +  +AK +TVA+ I G  WL STGV YT
Sbjct:  278 VDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVFYRCNIRGYQDTLYTHTMRQFYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIMQSFLSNVIRPEGWLEWNGDFALNSLFYGEYMNYGPGAGLGSRVKWPGYQVFNESTQAKNYTVAQFIEGNLWLPSTGVKYT 517          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 3.273e-85
Identity = 158/243 (65.02%), Postives = 182/243 (74.90%), Query Frame = -2
Query:  133 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 861
            V DGSTTF SAT+A  G GF+A+D+  QNTAG  KHQAVALRV +D S   RC I AYQD+LY H+NRQF+ +C I GTVDFIFGNAAVVLQ+C I AR+P S Q NMVTAQGRTDPNQNTG  IQK  + A+SDL+PV+ S  +YLGRPWKEYSRTVVMQS I + I+PAGW  W G+FAL TLYYGEY N G GA TS RV W G+ VIT   EA+ FT    I GGSWLK+T   ++ GL
Sbjct:   77 VQDGSTTFNSATVAAVGAGFLARDITFQNTAGAAKHQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.375e-83
Identity = 148/243 (60.91%), Postives = 175/243 (72.02%), Query Frame = -2
Query:  133 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 861
            VVDG TTF SAT AV    F+A ++  +NTAGPEKHQAVALR  AD S+   C  +AYQDTLY H+ RQFYR+CD+ GTVDFIFGNAAVV QNC +  RKPM  Q N +TAQGR+DPNQNTGTSIQ C +  + DL     ++++YLGRPWKEYSRTV MQS+I   ++P GW EW+GDFAL TLYY EY N GPG+ T+ RV WPGYHVI +  +A  FTV  L     W+  TGV YT GL
Sbjct:  336 VVDGWTTFNSATFAVTAPNFVAVNITFRNTAGPEKHQAVALRSGADFSIFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVFQNCNLYPRKPMPNQFNAITAQGRSDPNQNTGTSIQNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVYMQSYIDGFVEPVGWREWNGDFALSTLYYAEYNNTGPGSNTTNRVTWPGYHVI-NSTDAANFTVTGLFIEADWIWKTGVPYTSGL 577          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.520e-82
Identity = 143/243 (58.85%), Postives = 177/243 (72.84%), Query Frame = -2
Query:  133 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 861
            V DGSTT+ SAT  V GDGF A+D+  +NTAGP KHQAVALRVS+D S+  RC    YQDTL+ H+ RQFYRD  I GT+DFIFG+AA V QNC I  R+PM  Q NM+TAQGR DP+ N+G SIQ   + A+ + E VKG  +SYLGRPWK+YSRTV +++ I + IDP GW EWSG +AL TLYYGE++N G GAGT +RV WPG+HV+   EEA  FTV+  I G SW+  TGV ++ G+
Sbjct:  277 VPDGSTTYGSATFGVSGDGFWARDITFENTAGPHKHQAVALRVSSDLSLFYRCSFKGYQDTLFTHSLRQFYRDRHIYGTIDFIFGDAAAVFQNCDIFVRRPMDHQGNMITAQGRDDPHTNSGISIQHSRIRAAPEFEAVKGRFKSYLGRPWKKYSRTVFLKTDIDELIDPRGWREWSGSYALSTLYYGEFMNTGAGAGTGRRVNWPGFHVLRGEEEASPFTVSRFIQGDSWIPITGVPFSAGV 519          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 5.777e-82
Identity = 151/243 (62.14%), Postives = 175/243 (72.02%), Query Frame = -2
Query:  133 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 861
            V DGSTTF SAT+       +A+D+  QNTAG  KHQAVAL V +D S   RC + AYQDTLY H+NRQF+  C + GTVDFIFGN A V Q+C I AR+P S Q NMVTAQGRTDPNQNTG  IQKC + A+SDL PV+ S  +YLGRPWKEYSRTV+MQS I D I PAGW EW+G+FAL TL+YGEY N G GA TS RVKW G+ VIT   EA+ +T    I GGSWL STG  ++ GL
Sbjct:  341 VQDGSTTFHSATVVRVAGKVLARDITFQNTAGASKHQAVALCVGSDLSAFYRCDMLAYQDTLYVHSNRQFFVQCLVAGTVDFIFGNGAAVFQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEYANTGAGAPTSGRVKWKGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLGL 583          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 304.294 bits (778), Expect = 5.777e-82
Identity = 141/242 (58.26%), Postives = 179/242 (73.97%), Query Frame = -2
Query:  133 VDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 858
            +DG TTF+SAT AV G GF+A+D+  QNTAGPEKHQAVALR  +D SV  RC +  YQDTLY HT RQFYR+C ITGTVDFIFG+  VV QNC+I A++ +  Q N +TAQGR D NQ +G SIQ   + A +DL P   + R+YLGRPWK YSRTV +++++ D + P GW EW+ DFAL TL+YGE++N GPG+G S RVKWPGYHV  + ++A  FTV++ I G  WL STGV +++GL
Sbjct:  282 IDGWTTFRSATFAVSGRGFLARDITFQNTAGPEKHQAVALRSDSDLSVFFRCAMRGYQDTLYTHTMRQFYRECTITGTVDFIFGDGTVVFQNCQILAKRGLPNQKNTITAQGRKDVNQPSGFSIQFSNISADADLVPYLNTTRTYLGRPWKLYSRTVFIRNNMSDVVRPEGWLEWNADFALDTLFYGEFMNYGPGSGLSSRVKWPGYHVFNNSDQANNFTVSQFIKGNLWLPSTGVTFSDGL 523          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 303.908 bits (777), Expect = 7.544e-82
Identity = 146/240 (60.83%), Postives = 177/240 (73.75%), Query Frame = -2
Query:  133 GSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 852
            G+TTF SAT+A  GDGFIA+ +  +NTAG    QAVALR  +D SV  +C  +AYQDTLY H+NRQFYRDCD+ GTVDFIFGNAA VLQNC I AR+P SK +N +TAQGR+DPNQNTG  I    V A+SDL PV GS ++YLGRPW++YSRTV M++ +   IDP GW EW G+FALKTL+Y E+ N GPGA TS RV WPG+ V+    EA KFTV   + GGSW+ S+ V +T GL
Sbjct:  274 GTTTFNSATVAAVGDGFIARGITFRNTAGASNEQAVALRSGSDLSVFYQCSFEAYQDTLYVHSNRQFYRDCDVYGTVDFIFGNAAAVLQNCNIFARRPRSK-TNTITAQGRSDPNQNTGIIIHNSRVTAASDLRPVLGSTKTYLGRPWRQYSRTVFMKTSLDSLIDPRGWLEWDGNFALKTLFYAEFQNTGPGASTSGRVTWPGFRVLGSASEASKFTVGTFLAGGSWIPSS-VPFTSGL 511          
The following BLAST results are available for this feature:
BLAST of CV884338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME3_ARATH2.421e-8865.84Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME2_ARATH7.045e-8865.43Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME34_ARATH5.964e-8762.96Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME_PRUPE2.506e-8563.33Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME_DAUCA3.273e-8565.02Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PME7_ARATH1.375e-8360.91Probable pectinesterase/pectinesterase inhibitor 7... [more]
PME36_ARATH1.520e-8258.85Probable pectinesterase/pectinesterase inhibitor 3... [more]
PMEU1_SOLLC5.777e-8262.14Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME44_ARATH5.777e-8258.26Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME17_ARATH7.544e-8260.83Probable pectinesterase/pectinesterase inhibitor 1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002G07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T3_G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884338 ID=CV884338; Name=CV884338; organism=Citrus sinensis; type=EST; length=862bp
CATAAGCATTATTGCATTAGCCTACAACATTTATGAAACTAGTACAGCAC
GTTACTCGGATTCATTCATTATTCAACTGATAGAAAGCAGTGGCAAATAC
AAGCTTAAAAGATATATGCTGAGCTGACATCACAGCCCCTCAGTATAAGC
AACTCCAGTTGATTTCAACCACGACCCTCCTCCGATAAGCTCAGCTACTG
TAAATTTTTTTGCTTCTTCTGGGTCTGTAATAACGTGATAGCCAGGCCAT
TTCACTCTTTTGCTAGTCCCAGCACCTGGCCCTCTATTCAGATACTCCCC
ATAATACAGTGTCTTCAGTGCAAAATCTCCACTCCATTCTGACCATCCAG
CTGGATCGATATGATCCCCGATGTGTGACTGCATTACAACTGTTCTCGAG
TATTCTTTCCAAGGCCGGCCCAAGTACGAACGGATCGAGCCCTTTACGGG
CTCCAGATCTGAGCTTGCTATGACTTCACATTTTTGGATCGAAGTCCCTG
TGTTTTGATTTGGGTCAGTCCGTCCTTGGGCTGTGACCATGTTGGATTGC
TTGCTCATGGGCTTTCTGGCCGCGATTTTGCAGTTCTGTAAGACAACCGC
TGCATTGCCAAATATGAAATCAACCGTGCCGGTGATGTCGCAATCTCTGT
AGAATTGGCGATTCGTGTGGGCGTAGAGCGTGTCTTGGTAGGCGTCAATG
CGGCAGCGGTTGATGACCGACTGATCAGCGCTGACCCGTAGTGCCACGGC
TTGATGTTTCTCTGGCCCGGCTGTGTTTTGGATCCACAAATCTTGGGCTA
TAAATCCATCACCACCAACAGCTATCGTTGCTGATTTGAAGGTTGTAGAT
CCGTCAACGACG
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