CV884338

Overview
NameCV884338
Unique NameCV884338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 301.212 bits (770), Expect = 4.890e-81
Identity = 143/243 (58.85%), Postives = 174/243 (71.60%), Query Frame = -2
Query:  133 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 861
            VVDG TTF SAT AV    F+A ++  +NTAGPEKHQAVA+R SAD S+   C  +AYQDTLY H+ RQFYR+CDI GTVDFIFGNAAVV Q+C +  R+PM  Q N +TAQGRTDPNQNTG SI  C +  + DL     ++++YLGRPWKEYSRTV MQS+I + ++P GW EW+GDFAL TLYY EY N G G+ T+ RV WPGYHVI +  +A  FTV   + G  W+  +GV Y  GL
Sbjct:  330 VVDGWTTFNSATFAVTSPNFVAVNMTFRNTAGPEKHQAVAMRSSADLSIFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQDCNLYPRQPMQNQFNAITAQGRTDPNQNTGISIHNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREWNGDFALSTLYYAEYNNTGSGSSTTDRVVWPGYHVI-NSTDANNFTVENFLLGDGWMVQSGVPYISGL 571          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 6.387e-81
Identity = 141/242 (58.26%), Postives = 176/242 (72.73%), Query Frame = -2
Query:  133 VDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 858
            +DG TTF+SAT AV G GFIA+D+  QNTAGPEKHQAVA+R   D  V  RC +  YQDTLYAH+ RQF+R+C ITGTVDFIFG+A  V Q+C+I A++ +  Q N +TAQGR DPN+ TG +IQ   + A +DL     +  +YLGRPWK YSRTV MQ+++ D I+P GW EW+G+FAL TLYYGEY+N GPGA   +RVKWPGYHV+    EA  FTV++LI G  WL STG+ +  GL
Sbjct:  284 IDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVAIRSDTDLGVFYRCAMRGYQDTLYAHSMRQFFRECIITGTVDFIFGDATAVFQSCQIKAKQGLPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQNYMSDAINPVGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTSAEANNFTVSQLIQGNLWLPSTGITFIAGL 525          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 300.056 bits (767), Expect = 1.089e-80
Identity = 144/243 (59.26%), Postives = 174/243 (71.60%), Query Frame = -2
Query:  133 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 861
            VVDG TTF SAT  + G  FI  ++ I+NTAGP K QAVALR   D SV   C  +AYQDTLY H+ RQFYR+CD+ GTVDFIFGNAAVVLQNC +  R+P   QSN VTAQGRTDPNQNTGT+I  C +  + DL     ++++YLGRPWKEYSRTVVMQ++I   ++P+GW+ WSGDFAL TLYY EY N GPG+ T+ RV WPGYHVI +  +A  FTV   + G  W+  TGV +  GL
Sbjct:  317 VVDGWTTFNSATFILSGPNFIGVNITIRNTAGPTKGQAVALRSGGDLSVFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRQPRKGQSNEVTAQGRTDPNQNTGTAIHGCTIRPADDLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHVI-NATDASNFTVTNFLVGEGWIGQTGVPFVGGL 558          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 2.427e-80
Identity = 145/240 (60.42%), Postives = 175/240 (72.92%), Query Frame = -2
Query:  133 GSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 852
            G TT+K+AT+A  G+GFIA+D+   N AGP+  QAVALRV AD+SV++RC ++ YQD+LY H+ RQFYR+ DITGTVDFIFGN+AVV Q+C IAARKP+  Q N VTAQGR++P QNTG +IQ C + A S          +YLGRPWKEYSRTVVMQS IG  I P+GWS WSG F LK+L+YGEY N GPG+  S RVKW G H      EA+KFTVA  I G  WL STGV++  GL
Sbjct:  286 GWTTYKTATVAAMGEGFIARDMTFVNNAGPKSEQAVALRVGADKSVVHRCSVEGYQDSLYTHSKRQFYRETDITGTVDFIFGNSAVVFQSCNIAARKPLPGQRNFVTAQGRSNPGQNTGIAIQNCRITAES---------MTYLGRPWKEYSRTVVMQSFIGGSIHPSGWSPWSGGFGLKSLFYGEYGNSGPGSSVSGRVKWSGCHPSLTVTEAEKFTVASFIDGNIWLPSTGVSFDPGL 516          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.573e-79
Identity = 143/237 (60.34%), Postives = 168/237 (70.89%), Query Frame = -2
Query:  151 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGV 861
            VVDG TTF+S+T+AV G GFIA+ +  +N AGP KHQAVALR  AD S   +C    YQDTLY H+ RQFY +CD+ GT+DFIFGNAA VLQ C + ARKP   Q N+ TAQGR DPNQNTG SI  C+V A++DL PV  S ++YLGRPWKEYSRTV + S +   IDPAGW EWSGDFAL TLYY EY N GPG+ T+ RV WPGY V T+  E  +FTV   I G  WL S  +
Sbjct:   78 VVDGWTTFRSSTVAVVGTGFIARGISFENYAGPSKHQAVALRSGADFSAFYQCSFVGYQDTLYVHSLRQFYSECDVYGTIDFIFGNAAAVLQKCNLYARKPNENQKNIFTAQGRDDPNQNTGISILNCKVAAAADLIPVLSSFKTYLGRPWKEYSRTVFLLSQMESLIDPAGWLEWSGDFALTTLYYREYKNTGPGSNTTARVTWPGYAVTTNETEVIQFTVGNFIQGSQWLTSYNI 314          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 2.055e-79
Identity = 140/243 (57.61%), Postives = 178/243 (73.25%), Query Frame = -2
Query:  133 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 861
            V DG TTF+SAT+AV G+GF+A+D+ I NTAGPEKHQAVALRV+AD   + RC ID YQDTLY H+ RQFYR+CDI GT+D+IFGNAAVV Q C I ++ PM  Q  ++TAQ R   +++TG S+Q C ++AS DL      ++SYLGRPW+E+SRTVVM+S+I + ID +GWS+W+G  AL TLYYGEY N GPG+ T KRV WPG+H++   E+A  FT  E I G  WL ST   Y  G+
Sbjct:  306 VGDGWTTFRSATLAVSGEGFLARDIMITNTAGPEKHQAVALRVNADFVALYRCVIDGYQDTLYTHSFRQFYRECDIYGTIDYIFGNAAVVFQGCNIVSKLPMPGQFTVITAQSRDTQDEDTGISMQNCSILASEDLFNSSNKVKSYLGRPWREFSRTVVMESYIDEFIDGSGWSKWNGGEALDTLYYGEYNNNGPGSETVKRVNWPGFHIM-GYEDAFNFTATEFITGDGWLGSTSFPYDNGI 547          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.627e-76
Identity = 142/240 (59.17%), Postives = 170/240 (70.83%), Query Frame = -2
Query:  133 GSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 852
            G  T++SAT+A  GDGFIA+D+   N+AGP   QAVALRV +D+SV+ RC ID YQD+LY  + RQFYR+ DITGTVDFIFGN+AVV Q+C + +RK  S Q N VTAQGR+DPNQNTG SI  C +          GS ++YLGRPWK+YSRTVVMQS I   I P+GWS WS +FALKTLYYGE+ N GPG+  S RV W GYH      EA+ FTV+  I G SWL STGV +  GL
Sbjct:  299 GWNTYQSATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDRSVVYRCSIDGYQDSLYTLSKRQFYRETDITGTVDFIFGNSAVVFQSCNLVSRKGSSDQ-NYVTAQGRSDPNQNTGISIHNCRIT---------GSTKTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSNFALKTLYYGEFGNSGPGSSVSGRVSWAGYHPALTLTEAQGFTVSGFIDGNSWLPSTGVVFDSGL 528          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 6.186e-76
Identity = 139/243 (57.20%), Postives = 169/243 (69.55%), Query Frame = -2
Query:  133 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 861
            V DG+TTF+SAT AV G+GFIAQ +  +NTAGPEKHQAVALR S+D SV   C    YQDTLY H++RQF R+C+I GTVDFIFG+A  +LQNC I ARKPMS Q N +TAQ R +P++ TG  IQ   V  +S+         +YLGRPW+ +SRTV M+ ++G  + PAGW  WSG FAL TLYYGEY N G GA  S RVKWPGYHVI    EA+KFTV   + G  W+ +TGV   +GL
Sbjct:  321 VQDGTTTFRSATFAVSGNGFIAQGITFENTAGPEKHQAVALRSSSDFSVFYACSFKGYQDTLYLHSSRQFLRNCNIYGTVDFIFGDATAILQNCNIYARKPMSGQKNTITAQSRKEPDETTGFVIQSSTVATASE---------TYLGRPWRSHSRTVFMKCNLGALVSPAGWLPWSGSFALSTLYYGEYGNTGAGASVSGRVKWPGYHVIKTVTEAEKFTVENFLDGNYWITATGVPVNDGL 554          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.055e-75
Identity = 132/238 (55.46%), Postives = 171/238 (71.85%), Query Frame = -2
Query:  142 DGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYT 855
            DG T F SAT+ V G GFIA+DL   N AGPEKHQAVALR S+D S   RC  ++YQDT+Y H+++QFYR+CDI GTVDFIFG+A+VV QNC + AR+P   Q  + TAQGR +  + TG SI    ++A+ DL PV+ + ++YLGRPW+ YSRTV+M+S I D +DPAGW +W  DFAL+TLYYGEY+N GPG+  + RV+WPG+  I   EEA +F+V   I G  WL ST + +T
Sbjct:  278 DGWTAFHSATVGVRGSGFIAKDLSFVNYAGPEKHQAVALRSSSDLSAYYRCSFESYQDTIYVHSHKQFYRECDIYGTVDFIFGDASVVFQNCSLYARRPNPNQKIIYTAQGRENSREPTGISIISSRILAAPDLIPVQANFKAYLGRPWQLYSRTVIMKSFIDDLVDPAGWLKWKDDFALETLYYGEYMNEGPGSNMTNRVQWPGFKRIETVEEASQFSVGPFIDGNKWLNSTRIPFT 515          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.351e-75
Identity = 137/243 (56.38%), Postives = 170/243 (69.96%), Query Frame = -2
Query:  133 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 861
            VVDG TT+  ++ AV G+ F+A D+  +NTAGPEKHQAVALR +A+ S   RC  + YQDTLY H+ RQFYR+CDI GTVDFIFGNAA + QNC I ARKPM+KQ N +TA GR DPNQNTG SI  C + A+ DL     S  ++LGRPWK YSRTV MQS+I D + P GW EW+G   L T+YYGEY N GPGA T++RV+W GY+++ +  EA  FTV     G +WL  T + +  GL
Sbjct:  374 VVDGWTTYNCSSFAVVGERFMAVDVTFRNTAGPEKHQAVALRNNAEGSSFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAIFQNCNIYARKPMAKQKNAITAHGRLDPNQNTGISIINCTIKAAPDLAAEPKSAMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTIGLDTIYYGEYSNFGPGANTNQRVQWLGYNLL-NLAEAMNFTVYNFTMGDTWLPQTDIPFYGGL 615          
The following BLAST results are available for this feature:
BLAST of CV884338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME41_ARATH4.890e-8158.85Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME32_ARATH6.387e-8158.26Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME20_ARATH1.089e-8059.26Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME16_ARATH2.427e-8060.42Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME_ACTDE1.573e-7960.34Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME12_ARATH2.055e-7957.61Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME35_ARATH3.627e-7659.17Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME6_ARATH6.186e-7657.20Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME40_ARATH1.055e-7555.46Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME25_ARATH2.351e-7556.38Probable pectinesterase/pectinesterase inhibitor 2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002G07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T3_G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884338 ID=CV884338; Name=CV884338; organism=Citrus sinensis; type=EST; length=862bp
CATAAGCATTATTGCATTAGCCTACAACATTTATGAAACTAGTACAGCAC
GTTACTCGGATTCATTCATTATTCAACTGATAGAAAGCAGTGGCAAATAC
AAGCTTAAAAGATATATGCTGAGCTGACATCACAGCCCCTCAGTATAAGC
AACTCCAGTTGATTTCAACCACGACCCTCCTCCGATAAGCTCAGCTACTG
TAAATTTTTTTGCTTCTTCTGGGTCTGTAATAACGTGATAGCCAGGCCAT
TTCACTCTTTTGCTAGTCCCAGCACCTGGCCCTCTATTCAGATACTCCCC
ATAATACAGTGTCTTCAGTGCAAAATCTCCACTCCATTCTGACCATCCAG
CTGGATCGATATGATCCCCGATGTGTGACTGCATTACAACTGTTCTCGAG
TATTCTTTCCAAGGCCGGCCCAAGTACGAACGGATCGAGCCCTTTACGGG
CTCCAGATCTGAGCTTGCTATGACTTCACATTTTTGGATCGAAGTCCCTG
TGTTTTGATTTGGGTCAGTCCGTCCTTGGGCTGTGACCATGTTGGATTGC
TTGCTCATGGGCTTTCTGGCCGCGATTTTGCAGTTCTGTAAGACAACCGC
TGCATTGCCAAATATGAAATCAACCGTGCCGGTGATGTCGCAATCTCTGT
AGAATTGGCGATTCGTGTGGGCGTAGAGCGTGTCTTGGTAGGCGTCAATG
CGGCAGCGGTTGATGACCGACTGATCAGCGCTGACCCGTAGTGCCACGGC
TTGATGTTTCTCTGGCCCGGCTGTGTTTTGGATCCACAAATCTTGGGCTA
TAAATCCATCACCACCAACAGCTATCGTTGCTGATTTGAAGGTTGTAGAT
CCGTCAACGACG
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