CV884338

Overview
NameCV884338
Unique NameCV884338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 4.010e-75
Identity = 134/237 (56.54%), Postives = 173/237 (73.00%), Query Frame = -2
Query:  133 TFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 843
            TF +AT+A  G+GFI  D+  +NTAGP K  AVALRVS D SVI RCR++ YQD LY H++RQFYR+C ITGTVDFI GNA  V Q C+I AR+P   QSN++TAQ R   +  +G +IQKC + ASSDL+    ++++YLGRPW+ +S   VMQS IGD +DPAGW+ W G+  L TL+Y EY NRGPGA TS+RVKW G+ V+ DP++A +FTVA+L+ G +WLK T + Y  GL
Sbjct:  290 TFNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRAFKDIYSGFTIQKCNITASSDLDTT--TVKTYLGRPWRIFSTVAVMQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKETRIPYESGL 524          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.990e-74
Identity = 137/242 (56.61%), Postives = 167/242 (69.01%), Query Frame = -2
Query:  133 VDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 858
            + G TTF++AT+AV G GFIA+D+  +NTAGP+  QAVALRV +DQS   RC ++ YQDTLYAH+ RQFYRDC+I GT+DFIFGN A VLQNCKI  R P+  Q   +TAQGR  PNQNTG  IQ   V+A+           +YLGRPWK YSRTV M +++   + P GW EW G+FAL TL+YGEY N GPG  +S RVKWPGYH++ D   A  FTV   I G  WL +TGV +T GL
Sbjct:  310 MQGLTTFRTATVAVSGRGFIAKDITFRNTAGPQNRQAVALRVDSDQSAFYRCSVEGYQDTLYAHSLRQFYRDCEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPNQNTGFVIQNSYVLATQP---------TYLGRPWKLYSRTVYMNTYMSQLVQPRGWLEWFGNFALDTLWYGEYNNIGPGWRSSGRVKWPGYHIM-DKRTALSFTVGSFIDGRRWLPATGVTFTAGL 541          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 3.394e-74
Identity = 128/233 (54.94%), Postives = 167/233 (71.67%), Query Frame = -2
Query:  145 TFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAY 843
            T+ +AT+A+ GD F A+++  +NTAGPE HQAVALRVSAD +V   C+ID YQDTLY H++RQF+RDC ++GTVDFIFG+  VVLQNC I  RKPM  QS M+TAQGR+D  ++TG  +Q C +       PVK   ++YLGRPWKE+SRT++M + I D IDPAGW  W+GDFAL TLYY EY N GPG+  ++RVKWPG   ++ P++A +FT A  + G  W+    V Y
Sbjct:  335 TYLTATVAINGDNFTAKNIGFENTAGPEGHQAVALRVSADLAVFYNCQIDGYQDTLYVHSHRQFFRDCTVSGTVDFIFGDGIVVLQNCNIVVRKPMKSQSCMITAQGRSDKRESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVIDPAGWLPWNGDFALNTLYYAEYENNGPGSNQAQRVKWPGIKKLS-PKQALRFTPARFLRGNLWIPPNRVPY 566          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 3.394e-74
Identity = 136/242 (56.20%), Postives = 167/242 (69.01%), Query Frame = -2
Query:  133 VDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 858
            +DG TT+ S+T AV GD F+A D+  +NTAGPEKHQAVA+R +AD S   RC  + YQDTLY H+ RQFYR+CDI GT+DFIFGNAA + QNC I ARKPM+ Q N VTA GRTDPNQ TG SI  C + A+ DL     S  ++LGRPWK YSRTV +QS+I D + P GW EW+G   L T+ YGEY N GPGA TSKRV+W GY ++ +  +A  FTV     G +WL  T + +  GL
Sbjct:  380 IDGWTTYNSSTFAVVGDRFVAVDVTFRNTAGPEKHQAVAVRNNADGSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTIDFIFGNAAAIFQNCNIYARKPMANQKNAVTAHGRTDPNQKTGISIINCTIGAAPDLAADPKSTMTFLGRPWKPYSRTVYIQSYISDVVQPVGWLEWNGTTGLDTISYGEYDNFGPGADTSKRVQWSGYSLL-NLVQAMNFTVYNFTLGDTWLPQTDIPFYGGL 620          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.433e-74
Identity = 130/237 (54.85%), Postives = 171/237 (72.15%), Query Frame = -2
Query:  133 TFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 843
            T+ +AT+A  G+GFI  D+  +NTAGP K  AVALRVS D SVI RCR++ YQD LY H++RQFYR+C ITGTVDFI GNA  V Q C+I AR+P   QSN++TAQ R   +  +G SIQ C +  SSDL+    ++++YLGRPW+ +S   V+QS IGD +DPAGW+ W G+  L TL+Y EY NRGPGA TS+RVKW G+ V+ DP++A +FTVA+L+ G +WLK + + Y  GL
Sbjct:  263 TYNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRATKDVKSGFSIQNCNITTSSDLD--TATVKTYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPWKGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKKATEFTVAKLLDGETWLKESRIPYESGL 497          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.790e-74
Identity = 134/243 (55.14%), Postives = 167/243 (68.72%), Query Frame = -2
Query:  133 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 861
            V+DG+ TFK+AT AV G GF+A+D+   NTAGP KHQAVAL VSAD +   RC ++AYQDTLY H  RQFYR+C I GTVDFIFGN+A VLQ+C+I  R+PM  Q N +TAQGRTDPN NTG SI +C +    DL      + ++LGRPWK +S TV+M S++   ID  GW  W+GD A  T++YGEY N GPGA T  RVKW G   ++  +EA +FTV   I GG WL +T V +  GL
Sbjct:  324 VIDGTPTFKTATFAVFGKGFMARDMGFINTAGPSKHQAVALMVSADLTAFYRCTMNAYQDTLYVHAQRQFYRECTIIGTVDFIFGNSASVLQSCRILPRRPMKGQQNTITAQGRTDPNMNTGISIHRCNISPLGDLT----DVMTFLGRPWKNFSTTVIMDSYLHGFIDRKGWLPWTGDSAPDTIFYGEYKNTGPGASTKNRVKWKGLRFLS-TKEANRFTVKPFIDGGRWLPATKVPFRSGL 561          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.290e-73
Identity = 127/241 (52.70%), Postives = 168/241 (69.71%), Query Frame = -2
Query:  133 DGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 855
            DG TT+K+AT+A+ GD FIA+++  +NTAG  KHQAVA+RV AD+S+   C+ D YQDTLYAH++RQFYRDC I+GT+DF+FG+AA V QNC +  RKP+  Q+  +TA GR DP ++TG  +Q C ++   D   VK   ++YLGRPWKEYSRT++M + I D + P GW  W G+F L TL+Y E  N GPGA  +KRV WPG   ++D EE  KFT A+ I G +W+   GV Y  GL
Sbjct:  323 DGITTYKTATVAIVGDHFIAKNIAFENTAGAIKHQAVAIRVLADESIFYNCKFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLLNQACPITAHGRKDPRESTGFVLQGCTIVGEPDYLAVKEQSKTYLGRPWKEYSRTIIMNTFIPDFVPPEGWQPWLGEFGLNTLFYSEVQNTGPGAAITKRVTWPGIKKLSD-EEILKFTPAQYIQGDAWIPGKGVPYILGL 562          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.685e-73
Identity = 132/237 (55.70%), Postives = 168/237 (70.89%), Query Frame = -2
Query:  133 TFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 843
            TF +AT A  G GFI  D+  +NT GP K  AVALRVS D SVI RCR++ YQD LY H +RQFYR+C ITGTVDFI GNAA V Q C+I AR+P   QSN +TAQ R   +  +G SIQ C + ASSDL+    ++++YLGRPW+ +S   V+QS IGD +DPAGW+ W G+  L TL+Y EY NRGPGA TS+RVKW G+ V+ DP++A +FTVA+L+ G +WLK + + Y  GL
Sbjct:  290 TFYTATFASNGKGFIGVDMCFRNTVGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHIDRQFYRECFITGTVDFICGNAAAVFQFCQIVARQPNMGQSNFITAQSRETKDDKSGFSIQNCNITASSDLD--TATVKTYLGRPWRIFSTVAVLQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKESRIPYKSGL 524          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 2.200e-73
Identity = 133/238 (55.88%), Postives = 165/238 (69.33%), Query Frame = -2
Query:  145 VDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAY 858
            +DG+ TF++AT AV G GF+A+D+   NTAGP KHQAVAL VSAD SV  +C +DA+QDT+YAH  RQFYRDC I GTVDFIFGNAAVV Q C+I  R+PM  Q N +TAQGR DPNQNTG SI  C +    +L      I+++LGRPWK++S TV+M+S +   I+P GW  W+GD A  T++Y EYLN GPGA T  RVKW G       +EA KFTV   I G +WL +T V +
Sbjct:  327 IDGTPTFETATFAVFGKGFMARDMGFINTAGPAKHQAVALMVSADLSVFYKCTMDAFQDTMYAHAQRQFYRDCVILGTVDFIFGNAAVVFQKCEILPRRPMKGQQNTITAQGRKDPNQNTGISIHNCTIKPLDNLT----DIQTFLGRPWKDFSTTVIMKSFMDKFINPKGWLPWTGDTAPDTIFYAEYLNSGPGASTKNRVKWQGLKTSLTKKEANKFTVKPFIDGNNWLPATKVPF 560          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.874e-73
Identity = 130/241 (53.94%), Postives = 167/241 (69.29%), Query Frame = -2
Query:  136 VDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEG 858
            +DG +TF++ T+ V G G+IA+D+   N+AGP K QAVA R  +D S   RC  D YQDTLY H+ +QFYR+CDI GT+DFIFGNAAVV QN  + ARKP        TAQ R   +Q TG SI  C ++A+ DL PVK + ++YLGRPW++YSRTV+++S I D I PAGW E   DFAL+TLYYGEY+N GPGA  +KRV WPG+  I +  EA +FTV   I G +WL STG+ ++ G
Sbjct:  291 IDGWSTFQTPTVGVKGKGYIAKDISFVNSAGPAKAQAVAFRSGSDHSAFYRCEFDGYQDTLYVHSAKQFYRECDIYGTIDFIFGNAAVVFQNSSLYARKPNPGHKIAFTAQSRNQSDQPTGISILNCRILAAPDLIPVKENFKAYLGRPWRKYSRTVIIKSFIDDLIHPAGWLEGKKDFALETLYYGEYMNEGPGANMAKRVTWPGFRRIENQTEATQFTVGPFIDGSTWLNSTGIPFSLG 531          
The following BLAST results are available for this feature:
BLAST of CV884338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME19_ARATH4.010e-7556.54Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME22_ARATH1.990e-7456.61Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME58_ARATH3.394e-7454.94Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME47_ARATH3.394e-7456.20Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME30_ARATH4.433e-7454.85Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]
PME24_ARATH5.790e-7455.14Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME28_ARATH1.290e-7352.70Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME42_ARATH1.685e-7355.70Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME46_ARATH2.200e-7355.88Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME39_ARATH2.874e-7353.94Probable pectinesterase/pectinesterase inhibitor 3... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_002G07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T3_G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884338 ID=CV884338; Name=CV884338; organism=Citrus sinensis; type=EST; length=862bp
CATAAGCATTATTGCATTAGCCTACAACATTTATGAAACTAGTACAGCAC
GTTACTCGGATTCATTCATTATTCAACTGATAGAAAGCAGTGGCAAATAC
AAGCTTAAAAGATATATGCTGAGCTGACATCACAGCCCCTCAGTATAAGC
AACTCCAGTTGATTTCAACCACGACCCTCCTCCGATAAGCTCAGCTACTG
TAAATTTTTTTGCTTCTTCTGGGTCTGTAATAACGTGATAGCCAGGCCAT
TTCACTCTTTTGCTAGTCCCAGCACCTGGCCCTCTATTCAGATACTCCCC
ATAATACAGTGTCTTCAGTGCAAAATCTCCACTCCATTCTGACCATCCAG
CTGGATCGATATGATCCCCGATGTGTGACTGCATTACAACTGTTCTCGAG
TATTCTTTCCAAGGCCGGCCCAAGTACGAACGGATCGAGCCCTTTACGGG
CTCCAGATCTGAGCTTGCTATGACTTCACATTTTTGGATCGAAGTCCCTG
TGTTTTGATTTGGGTCAGTCCGTCCTTGGGCTGTGACCATGTTGGATTGC
TTGCTCATGGGCTTTCTGGCCGCGATTTTGCAGTTCTGTAAGACAACCGC
TGCATTGCCAAATATGAAATCAACCGTGCCGGTGATGTCGCAATCTCTGT
AGAATTGGCGATTCGTGTGGGCGTAGAGCGTGTCTTGGTAGGCGTCAATG
CGGCAGCGGTTGATGACCGACTGATCAGCGCTGACCCGTAGTGCCACGGC
TTGATGTTTCTCTGGCCCGGCTGTGTTTTGGATCCACAAATCTTGGGCTA
TAAATCCATCACCACCAACAGCTATCGTTGCTGATTTGAAGGTTGTAGAT
CCGTCAACGACG
back to top