CV884338

Overview
NameCV884338
Unique NameCV884338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2338 contig Csv1_Contig2338:25..886. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.753e-73
Identity = 132/245 (53.88%), Postives = 172/245 (70.20%), Query Frame = -2
Query:  133 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEW--SGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 861
            V  G TT+ SAT   GG  F+A+D+   NTAGP + QAVA+R S+D SV  R  I  +QDTLY H+ RQF+R+C I+GT+DFIFGNAAVV QNC I  R+P+  Q+N++TAQGR DP QNTG +I    +IA+SDL+PV  + ++YLGRPW+ YSR  +M+++I + I P GWS W    +FAL T++YGEY N GPG+ T  RV+W G+H IT    A +FTV  LI GGSWL +TGV +  GL
Sbjct:  350 VQHGYTTYNSATGGFGGQRFVAKDMTFINTAGPLRGQAVAVRSSSDLSVFYRVGIHGFQDTLYIHSQRQFFRECYISGTIDFIFGNAAVVFQNCMILVRRPLHGQANIITAQGRGDPFQNTGITIHSSRIIAASDLKPVIRAYKTYLGRPWQAYSRVTIMKTYIDNSISPLGWSPWLRGSNFALNTVFYGEYKNFGPGSSTRWRVRWKGFHAITSTAVASRFTVGSLIAGGSWLPATGVPFKSGL 594          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 271.552 bits (693), Expect = 4.149e-72
Identity = 127/234 (54.27%), Postives = 170/234 (72.65%), Query Frame = -2
Query:  142 TFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYT 843
            TF +ATI + GD F A+++ I+NTAGPE  QAVALRVSAD +V + C+ID +QDTLY H++RQFYRDC ++GTVDFIFG+A  +LQNCKI  RKP   Q+ MVTAQGR++  ++TG  +  C +       P+K   ++YLGRPWKE+SRT++M++ I D IDPAGW  WSGDFALKTLYY E++N GPG+  ++RVKWPG   +T P++A  +T    + G +W+  T V YT
Sbjct:  333 TFLTATITIEGDHFTAKNIGIENTAGPEGGQAVALRVSADYAVFHSCQIDGHQDTLYVHSHRQFYRDCTVSGTVDFIFGDAKCILQNCKIVVRKPNKGQTCMVTAQGRSNVRESTGLVLHGCHITGDPAYIPMKSVNKAYLGRPWKEFSRTIIMKTTIDDVIDPAGWLPWSGDFALKTLYYAEHMNTGPGSNQAQRVKWPGIKKLT-PQDALLYTGDRFLRGDTWIPQTQVPYT 565          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.513e-71
Identity = 130/245 (53.06%), Postives = 163/245 (66.53%), Query Frame = -2
Query:  133 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWS-GDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGG-SWLKSTGVAYTEGL 861
            V DG +TF + T+ V G  F+A+++  +NTAGPEK QAVALRVSAD+++I  C+ID YQDTLY HT RQFYRDC ITGTVDFIFGN   VLQNCK+  RKP   QS MVTAQGRT+P Q     +Q CE+   +D   +    ++YLGRPWKEYSRT++MQS+I   I+P GW+ W+  +F   T YY EY NRGPGA   KR+ W G+      E A+KFT    I    +WL+   V Y  G+
Sbjct:  127 VKDGPSTFHTTTVGVNGANFVAKNIGFENTAGPEKEQAVALRVSADKAIIYNCQIDGYQDTLYVHTYRQFYRDCTITGTVDFIFGNGEAVLQNCKVIVRKPAQNQSCMVTAQGRTEPIQKGAIVLQNCEIKPDTDYFSLSPPSKTYLGRPWKEYSRTIIMQSYIDKFIEPEGWAPWNITNFGRDTSYYAEYQNRGPGAALDKRITWKGFQKGFTGEAAQKFTAGVYINNDENWLQKANVPYEAGM 371          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.513e-71
Identity = 129/240 (53.75%), Postives = 167/240 (69.58%), Query Frame = -2
Query:  133 GSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 852
            G +T+KSAT    GDGF+ +D+ I+NTAGPE HQAVALR ++D SV  RC I+ YQDTLY H+ RQF+R+CDI GTVDFIFGNAA VLQNC+I AR P     N +TAQ R +PNQ TG  I    V  +  ++   G +++YLGRPW+ Y+RTVV+ +++   I+P GW +W    AL TLYYGEY N GPG+GT  RV W G+HVI+D +EA++FT+ + I   SWL  T V +T  L
Sbjct:  238 GFSTYKSATFVAEGDGFVGRDITIRNTAGPENHQAVALRSNSDMSVFYRCSIEGYQDTLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFARNP-PNGVNTITAQSRFNPNQTTGIVIHNSVVKGAPGVQ--LGGVKTYLGRPWRSYARTVVIGTYLDTLIEPNGWIDWDNVTALSTLYYGEYQNSGPGSGTENRVDWAGFHVISDIQEAREFTLPKFIDSASWLPPTKVPFTINL 474          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 7.825e-71
Identity = 121/241 (50.21%), Postives = 165/241 (68.46%), Query Frame = -2
Query:  133 DGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 855
            DG TT+++AT+A+ G+ FIA+++  +NTAG  KHQAVA+RV +D+S+   CR D YQDTLY H++RQF+RDC I+GT+DF+FG+AA V QNC +  RKP+  Q+  +TA GR DP ++TG   Q C +    D   VK + ++YLGRPWKEYSRT++M + I D + P GW  W GDF LKTL+Y E  N GPG+  + RV W G   +++ E+  KFT A+ I G  W+   GV YT GL
Sbjct:  326 DGITTYRTATVAIVGNYFIAKNIGFENTAGAIKHQAVAVRVQSDESIFFNCRFDGYQDTLYTHSHRQFFRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLPNQACPITAHGRKDPRESTGFVFQGCTIAGEPDYLAVKETSKAYLGRPWKEYSRTIIMNTFIPDFVQPQGWQPWLGDFGLKTLFYSEVQNTGPGSALANRVTWAGIKTLSE-EDILKFTPAQYIQGDDWIPGKGVPYTTGL 565          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.335e-70
Identity = 125/245 (51.02%), Postives = 167/245 (68.16%), Query Frame = -2
Query:  133 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEW--SGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 861
            V  G TT+ SAT  + G  FIA+ +  +NTAGP K QAVALR S+D S+  +C I+ YQDTL  H+ RQFYR+C I GTVDFIFGNAA V QNC I  R+P+  Q+N++TAQGR DP QNTG SI    ++ + DL+PV G++++Y+GRPW ++SRTVV+Q+++ + + P GWS W     F L TL+Y EY N GP + T  RV W G+HV+    +A  FTV + I G +WL  TG+ +T GL
Sbjct:  292 VQGGYTTYNSATAGIEGLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYKCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAAVFQNCLILPRRPLKGQANVITAQGRADPFQNTGISIHNSRILPAPDLKPVVGTVKTYMGRPWMKFSRTVVLQTYLDNVVSPVGWSPWIEGSVFGLDTLFYAEYKNTGPASSTRWRVSWKGFHVLGRASDASAFTVGKFIAGTAWLPRTGIPFTSGL 536          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 8.652e-70
Identity = 126/237 (53.16%), Postives = 167/237 (70.46%), Query Frame = -2
Query:  151 VDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEW-SGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGV 858
            VDG+ T+++AT A+ G GFI +D+ I NTAG  KHQAVA R  +D SV  +C  D +QDTLY H+NRQFYRDCD+TGT+DFIFG+AAVV Q CKI  R+P+S Q N +TAQG+ DPNQ++G SIQ+C + A+ ++        +YLGRPWKE+S TV+M++ IG  + P+GW  W SG     ++ YGEY N GPG+  ++RVKW GY  +    EA KFTVA L+ G  W+ +TGV
Sbjct:  350 VDGTPTYETATFAIQGKGFIMKDIGIINTAGAAKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISANGNV-----IAPTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATGV 581          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 9.566e-69
Identity = 131/238 (55.04%), Postives = 160/238 (67.23%), Query Frame = -2
Query:  133 TFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEW-SGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 843
            TF +AT    G+GF+AQ +  +NTAGPE HQAVA+RV +D+SV   CR + YQDTLYA+T+RQ+YR C I GTVDFIFG+AA + QNC I  RK +  Q N VTAQGR D  Q TG  I  C V  + DL+PVK   +SYLGRPWK +SRTVVM+S I D IDP GW  W   DFA+ TL Y EY N GP   T+ RVKWPG+ V+ + EEA KFTV   +  G W+++ G     GL
Sbjct:  371 TFLTATFVAQGEGFMAQSMGFRNTAGPEGHQAVAIRVQSDRSVFLNCRFEGYQDTLYAYTHRQYYRSCVIIGTVDFIFGDAAAIFQNCDIFIRKGLPGQKNTVTAQGRVDKFQTTGFVIHNCTVAPNEDLKPVKAQFKSYLGRPWKPHSRTVVMESTIEDVIDPVGWLRWQETDFAIDTLSYAEYKNDGPSGATAARVKWPGFRVL-NKEEAMKFTVGPFL-QGEWIQAIGSPVKLGL 606          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.249e-68
Identity = 130/245 (53.06%), Postives = 163/245 (66.53%), Query Frame = -2
Query:  133 VDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIR--SYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDF-ALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 858
            +DG+ TF++AT AV G GFIA+D+   N AG  KHQAVALR  +D+SV  RC  D +QDTLYAH+NRQFYRDCDITGT+DFIFGNAAVV Q+CKI  R+P+  Q N +TAQG+ DPNQNTG  IQK      S + P   ++   +YLGRPWK++S TV+MQS IG  ++P GW  W  +     T++Y EY N GPGA  S+RVKW GY        A++FTV   I G  WL +  V +   L
Sbjct:  343 MDGTPTFETATFAVKGKGFIAKDIGFVNNAGASKHQAVALRSGSDRSVFFRCSFDGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQSCKIMPRQPLPNQFNTITAQGKKDPNQNTGIIIQK------STITPFGNNLTAPTYLGRPWKDFSTTVIMQSDIGALLNPVGWMSWVPNVEPPTTIFYAEYQNSGPGADVSQRVKWAGYKPTITDRNAEEFTVQSFIQGPEWLPNAAVQFDSTL 581          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.131e-68
Identity = 126/245 (51.43%), Postives = 166/245 (67.76%), Query Frame = -2
Query:  133 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWS--GDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 861
            V  G TT+ SAT  + G  FIA+ +  QNTAGP K QAVALR S+D S+  RC I+ YQDTL  H+ RQFYR+C I GTVDFIFGNAAVV QNC I  R P+  Q+N++TAQGRTD  QNTG SI    +I + DL+PV  S+++Y+GRPW  YSRTVV++++I   + P GWS W+    + L TL+Y EY N GP + T  RV+W G+HV++   +A  F+V + I G +WL  +G+ +T  L
Sbjct:  296 VKGGYTTYSSATAGIEGLHFIAKGIAFQNTAGPAKGQAVALRSSSDLSIFYRCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAVVFQNCIILPRLPLKGQANVITAQGRTDLFQNTGISIHNSIIIPAPDLKPVVRSVKTYMGRPWMMYSRTVVLKTYIDSVVSPVGWSPWTKGSTYGLDTLFYAEYKNIGPASSTRWRVRWKGFHVLSKASDASAFSVGKFIAGTAWLPGSGIPFTSEL 540          
The following BLAST results are available for this feature:
BLAST of CV884338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME33_ARATH3.753e-7353.88Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME23_ARATH4.149e-7254.27Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME_PETIN3.513e-7153.06Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]
PME38_ARATH3.513e-7153.75Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME21_ARATH7.825e-7150.21Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME59_ARATH1.335e-7051.02Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME1_ARATH8.652e-7053.16Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME45_ARATH9.566e-6955.04Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME3_PHAVU1.249e-6853.06Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME60_ARATH2.131e-6851.43Probable pectinesterase/pectinesterase inhibitor 6... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002G07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T3_G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884338 ID=CV884338; Name=CV884338; organism=Citrus sinensis; type=EST; length=862bp
CATAAGCATTATTGCATTAGCCTACAACATTTATGAAACTAGTACAGCAC
GTTACTCGGATTCATTCATTATTCAACTGATAGAAAGCAGTGGCAAATAC
AAGCTTAAAAGATATATGCTGAGCTGACATCACAGCCCCTCAGTATAAGC
AACTCCAGTTGATTTCAACCACGACCCTCCTCCGATAAGCTCAGCTACTG
TAAATTTTTTTGCTTCTTCTGGGTCTGTAATAACGTGATAGCCAGGCCAT
TTCACTCTTTTGCTAGTCCCAGCACCTGGCCCTCTATTCAGATACTCCCC
ATAATACAGTGTCTTCAGTGCAAAATCTCCACTCCATTCTGACCATCCAG
CTGGATCGATATGATCCCCGATGTGTGACTGCATTACAACTGTTCTCGAG
TATTCTTTCCAAGGCCGGCCCAAGTACGAACGGATCGAGCCCTTTACGGG
CTCCAGATCTGAGCTTGCTATGACTTCACATTTTTGGATCGAAGTCCCTG
TGTTTTGATTTGGGTCAGTCCGTCCTTGGGCTGTGACCATGTTGGATTGC
TTGCTCATGGGCTTTCTGGCCGCGATTTTGCAGTTCTGTAAGACAACCGC
TGCATTGCCAAATATGAAATCAACCGTGCCGGTGATGTCGCAATCTCTGT
AGAATTGGCGATTCGTGTGGGCGTAGAGCGTGTCTTGGTAGGCGTCAATG
CGGCAGCGGTTGATGACCGACTGATCAGCGCTGACCCGTAGTGCCACGGC
TTGATGTTTCTCTGGCCCGGCTGTGTTTTGGATCCACAAATCTTGGGCTA
TAAATCCATCACCACCAACAGCTATCGTTGCTGATTTGAAGGTTGTAGAT
CCGTCAACGACG
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