CV884338

Overview
NameCV884338
Unique NameCV884338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.058e-67
Identity = 124/238 (52.10%), Postives = 161/238 (67.65%), Query Frame = -2
Query:  133 TFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEW-SGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 843
            TF +AT    G+GF+AQ +  +NTAG E HQAVA+RV +D+S+   CR + YQDTLYA+T+RQ+YR C I GT+DFIFG+AA + QNC I  RK +  Q N VTAQGR D  Q TG  +  C++ A+ DL+PVK   +SYLGRPWK YSRT++M+S I + IDP GW  W   DFA+ TLYY EY N+G    T+ RVKWPG+ VI + EEA  +TV   +  G W+ ++G     GL
Sbjct:  376 TFLTATFVAQGEGFMAQSMGFRNTAGSEGHQAVAIRVQSDRSIFLNCRFEGYQDTLYAYTHRQYYRSCVIVGTIDFIFGDAAAIFQNCNIFIRKGLPGQKNTVTAQGRVDKFQTTGFVVHNCKIAANEDLKPVKEEYKSYLGRPWKNYSRTIIMESKIENVIDPVGWLRWQETDFAIDTLYYAEYNNKGSSGDTTSRVKWPGFKVI-NKEEALNYTVGPFL-QGDWISASGSPVKLGL 611          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.762e-65
Identity = 113/233 (48.50%), Postives = 158/233 (67.81%), Query Frame = -2
Query:  145 TFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAY 843
            T+++A++AV GD F+A+D+  +NTAG  +HQAVALRVSAD +V   C ++ YQDTLY HT+RQFYR+C ++GT+DF+FG+A  V QNC+   R+PM  Q  +VTAQGR D  + TG  I    +   +   PVK   R++LGRPWKE+SRT++M + I D IDP GW +W+  FAL TL+Y EY NRG G+G  +RV+W G   I+D   A++F     + G +W+  T + Y
Sbjct:  467 TYRTASVAVNGDYFMAKDIGFENTAGAARHQAVALRVSADFAVFFNCHMNGYQDTLYVHTHRQFYRNCRVSGTIDFVFGDAKAVFQNCEFVIRRPMEHQQCIVTAQGRKDRRETTGIVIHNSRITGDASYLPVKAKNRAFLGRPWKEFSRTIIMNTEIDDVIDPEGWLKWNETFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRISD-RAAREFAPGNFLRGNTWIPQTRIPY 698          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 8.380e-65
Identity = 119/235 (50.64%), Postives = 159/235 (67.66%), Query Frame = -2
Query:  166 VVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSG--DFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELI-GGGSWL 861
            +VDG  TF ++T A  G GF+ +D+ I NTAGPEKHQAVA R  +D+SV  RC  D YQDTLY H+NRQ+YR+CD+TGTVDFIFG   VV Q C I  R+P+  Q N +TA+G  + NQNTG SI +C +  + ++     +  +YLGRPWK +S+TV+MQS IG  ++PAGW  W+   D   +T++Y EY N GPG+  SKRVKW GY  I+  +EA +FTV   + G  +W+
Sbjct:  729 MVDGVRTFNTSTFATEGKGFMMKDMGIINTAGPEKHQAVAFRSDSDRSVYYRCSFDGYQDTLYTHSNRQYYRNCDVTGTVDFIFGAGTVVFQGCSIRPRQPLPNQFNTITAEGTQEANQNTGISIHQCTISPNGNV-----TATTYLGRPWKLFSKTVIMQSVIGSFVNPAGWIAWNSTYDPPPRTIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTVKYFLRGDDNWI 958          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.438e-64
Identity = 124/228 (54.39%), Postives = 156/228 (68.42%), Query Frame = -2
Query:  178 GSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMS-KQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEW--SGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGG 852
            G++   +AT+ V GDGFIA+D+ I+N AGP  HQA+AL +++DQSV+ RC I  YQDTLYA   RQFYR+CDI GT+DFIFGNAA V Q+C I  R+P   K  N++ A GRTD  QNTG ++  C +   SDL PVK    SYLGRPW++YSR +VM+S+I D I   GW+ W  SGD  LKTLY+GE+ N GP A  SKRV W G+H I   EEA  F+V +   G
Sbjct:  269 GTSVPDTATMTVTGDGFIARDIGIKNIAGPRGHQAIALSITSDQSVLYRCSISGYQDTLYAAALRQFYRECDIYGTIDFIFGNAAAVFQSCNIFLRRPHGVKAYNVILANGRTDQRQNTGFALHSCRIRTDSDLSPVKHKYSSYLGRPWRKYSRAIVMESYIDDAIAEGGWAGWLDSGDEVLKTLYFGEFKNYGPKARISKRVTWEGFHSI-GFEEANYFSVVKRRNG 495          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.172e-58
Identity = 109/173 (63.01%), Postives = 134/173 (77.46%), Query Frame = -2
Query:  340 VDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWS 858
            VDG  TF SAT+AV   GF+AQDL I+NTAGPEK QAVALR+S D ++I RCRIDAYQDTLYA++ RQFYRDC ITGTVDFIFG AA V Q C+I ARKP   Q+N++TAQ R +    +G S QKC + ASSDL P+KG+++++LGRPW+ +SR V M+S I D ID AGW+
Sbjct:  115 VDGIKTFDSATLAVDESGFMAQDLCIRNTAGPEKRQAVALRISTDMTIIYRCRIDAYQDTLYAYSGRQFYRDCYITGTVDFIFGRAAAVFQYCQIEARKPGIGQTNILTAQSREEDTATSGFSFQKCNISASSDLTPIKGTVKTFLGRPWRAFSRVVFMESFIDDVIDRAGWT 287          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 6.020e-55
Identity = 111/241 (46.06%), Postives = 149/241 (61.83%), Query Frame = -2
Query:  133 GSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQG-RTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 852
            G+TT  S T+ V  +GF+A+ +  +NTAGP  HQAVALRV+ D++VI  CR D YQDTLY +  RQFYR+  ++GTVDFIFG +A V+QN  I  RK    QSN VTA G         G  +  C +I   +LE  K +I+SYLGRPWK+++ TV++ + IGD I P GW+EW G+   KT  Y E+ NRGPGA T++R  W    V     E + +TVA  +G  +W++   V    GL
Sbjct:  350 GTTTSLSGTVQVESEGFMAKWIGFKNTAGPLGHQAVALRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILVRKGSPGQSNYVTADGNEKGAAMKIGIVLHNCRIIPDKELEADKLTIKSYLGRPWKKFATTVIIGTEIGDLIKPEGWTEWQGEQNHKTAKYIEFNNRGPGAATTQRPPW--VKVAKSAAEVETYTVANWVGPANWIQEANVPVQLGL 588          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.987e-54
Identity = 116/236 (49.15%), Postives = 150/236 (63.56%), Query Frame = -2
Query:  169 GSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCK--IAARK--PMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSD-LEPVKGS---IRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSW 852
            G TT+ +AT+ V GDGF+A+DL  QNTAGP+ HQAVA R  +D S+I  C     QDTLYAH  RQFY++C I G VDFIFGN+A V Q+C+  IA R+  P   + N VTAQGR DP+Q+TG     C +  + + ++  K +    +++LGRPWK+YSRTV +  ++   I P GW  WSGDFALKTLYYGE  N GPG+  S+RV W     I D E    ++VA  I    W
Sbjct:  314 GITTYNTATVGVVGDGFMARDLTFQNTAGPDAHQAVAFRSDSDFSLIENCEFLGNQDTLYAHGLRQFYKNCRIQGNVDFIFGNSAAVFQDCEILIAPRQINPEKGEKNAVTAQGRIDPSQSTGFVFLNCLINGTEEYMKLFKANPKVHKNFLGRPWKDYSRTVFIGCNLEALITPDGWLPWSGDFALKTLYYGESKNTGPGSDRSQRVSWSSQ--IPD-EHVHVYSVANFIQADEW 546          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.987e-54
Identity = 108/241 (44.81%), Postives = 145/241 (60.17%), Query Frame = -2
Query:  133 GSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQG-RTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 852
            G+TT  SAT+ V  +GF+A+ +  +NTAGP  HQA A+RV+ D++VI  CR D YQDTLY +  RQFYR+C ++GTVDFIFG +A V+QN  I  RK    Q N VTA G         G  +Q C ++    L P + ++ +YLGRPWK++S TV+M + +GD I P GW  W G+   K+  Y EY NRGPGA  ++RV W    V     E   FT A  +G  +W++   V  T GL
Sbjct:  350 GTTTSLSATVQVESEGFMAKWMGFKNTAGPMGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCRIVPDRKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEYNNRGPGAFANRRVNWA--KVARSAAEVNGFTAANWLGPINWIQEANVPVTIGL 588          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 6.655e-54
Identity = 113/245 (46.12%), Postives = 145/245 (59.18%), Query Frame = -2
Query:  157 GSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSK-----QSNMVTAQGRTDPNQNTGTSIQKCEVIAS----SDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKW----PGYHVITDPEEAKKFTVAELIGGGSWLKST 852
            G TTF+SAT+ V GDGF+A+DL I+NTAG + HQAVA R  +D SV+  C     QDTLYAH+ RQFY+ C I G VDFIFGN+A V Q+C I      SK      +N +TA GR D +Q+TG     C +  +     + +      +++LGRPWKE+SRTV +  ++   I P GW  W+GDFALKTLYYGEY N GPG+  S RV W    P  HV         ++VA  I    W  +T
Sbjct:  364 GMTTFESATVGVLGDGFMARDLTIENTAGADAHQAVAFRSDSDFSVLENCEFLGNQDTLYAHSLRQFYKQCRIQGNVDFIFGNSAAVFQDCDILIASKHSKLEQGGANNAITAHGRIDASQSTGFVFLNCSINGTEEYMKEFQANPEGHKNFLGRPWKEFSRTVFVNCNLESLISPDGWMPWNGDFALKTLYYGEYKNTGPGSVRSSRVPWSSEIPEKHV-------DVYSVANFIQADEWASTT 601          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 2.529e-53
Identity = 109/241 (45.23%), Postives = 144/241 (59.75%), Query Frame = -2
Query:  133 GSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDP-NQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 852
            G+TT  S T+ V  +GF+A+ +  +NTAGP  HQAVA+RV+ D++VI  CR D YQDTLY +  RQFYR+  ++GTVDFIFG +A V+QN  I  RK    Q N VTA G         G  +Q C ++    L   +  + SYLGRPWK++S TV++ S IGD I P GW  W G+   K+  Y EY NRGPGA T++RV W    +     E   FTVA  +G  +W++   V  T GL
Sbjct:  357 GTTTSLSGTVQVESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLIVVRKGNKGQFNTVTADGNEKGLAMKIGIVLQNCRIVPDKKLAAERLIVESYLGRPWKKFSTTVIINSEIGDVIRPEGWKIWDGESFHKSCRYVEYNNRGPGAITNRRVNW--VKIARSAAEVNDFTVANWLGPINWIQEANVPVTLGL 595          
The following BLAST results are available for this feature:
BLAST of CV884338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME13_ARATH1.058e-6752.10Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME43_ARATH3.762e-6548.50Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME26_ARATH8.380e-6550.64Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME54_ARATH2.438e-6454.39Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME56_ARATH1.172e-5863.01Probable pectinesterase 56 OS=Arabidopsis thaliana... [more]
PME37_ARATH6.020e-5546.06Probable pectinesterase/pectinesterase inhibitor V... [more]
PME51_ARATH2.987e-5449.15Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME4_ARATH2.987e-5444.81Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 P... [more]
PME64_ARATH6.655e-5446.12Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME5_ARATH2.529e-5345.23Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002G07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T3_G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884338 ID=CV884338; Name=CV884338; organism=Citrus sinensis; type=EST; length=862bp
CATAAGCATTATTGCATTAGCCTACAACATTTATGAAACTAGTACAGCAC
GTTACTCGGATTCATTCATTATTCAACTGATAGAAAGCAGTGGCAAATAC
AAGCTTAAAAGATATATGCTGAGCTGACATCACAGCCCCTCAGTATAAGC
AACTCCAGTTGATTTCAACCACGACCCTCCTCCGATAAGCTCAGCTACTG
TAAATTTTTTTGCTTCTTCTGGGTCTGTAATAACGTGATAGCCAGGCCAT
TTCACTCTTTTGCTAGTCCCAGCACCTGGCCCTCTATTCAGATACTCCCC
ATAATACAGTGTCTTCAGTGCAAAATCTCCACTCCATTCTGACCATCCAG
CTGGATCGATATGATCCCCGATGTGTGACTGCATTACAACTGTTCTCGAG
TATTCTTTCCAAGGCCGGCCCAAGTACGAACGGATCGAGCCCTTTACGGG
CTCCAGATCTGAGCTTGCTATGACTTCACATTTTTGGATCGAAGTCCCTG
TGTTTTGATTTGGGTCAGTCCGTCCTTGGGCTGTGACCATGTTGGATTGC
TTGCTCATGGGCTTTCTGGCCGCGATTTTGCAGTTCTGTAAGACAACCGC
TGCATTGCCAAATATGAAATCAACCGTGCCGGTGATGTCGCAATCTCTGT
AGAATTGGCGATTCGTGTGGGCGTAGAGCGTGTCTTGGTAGGCGTCAATG
CGGCAGCGGTTGATGACCGACTGATCAGCGCTGACCCGTAGTGCCACGGC
TTGATGTTTCTCTGGCCCGGCTGTGTTTTGGATCCACAAATCTTGGGCTA
TAAATCCATCACCACCAACAGCTATCGTTGCTGATTTGAAGGTTGTAGAT
CCGTCAACGACG
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