CV884338

Overview
NameCV884338
Unique NameCV884338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.634e-53
Identity = 107/241 (44.40%), Postives = 146/241 (60.58%), Query Frame = -2
Query:  133 GSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQ-NTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 852
            G+TT  S T+ V  +GF+A+ +  QNTAGP  HQAVA RV+ D++VI  CR D YQDTLY +  RQFYR+  ++GTVDFIFG +A V+QN  I  RK    Q+N VTA G         G  +  C ++A  +LE  + +++SYLGRPWK ++ T V+ + IGD I P GW+EW G+    T  Y E+ NRGPGA T+ RV W    +     E ++FTVA  +   +W++   V    GL
Sbjct:  346 GTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGHQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADGNEKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANTAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVPVQLGL 584          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 9.610e-53
Identity = 107/245 (43.67%), Postives = 140/245 (57.14%), Query Frame = -2
Query:  136 DGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEA-----KKFTVAELIGGGSWLKSTGVAYTEG 855
            DG  T+ +AT  V G  F+A+D+  +NTAG  KHQAVALRV+ADQ++   C++D +QDTLY  + RQFYRDC I+GT+DF+FG    V QNCK+  R P   Q  +VTA GR   N  +    Q         L  V   + SYLGRPWK+YS+ V+M S I     P G+  W G    +T  Y EY N+GPGA T+ RVKW G  V+T    A     K F +       +W+  +GV Y+ G
Sbjct:  202 DGINTYNTATFGVNGANFMAKDIGFENTAGTGKHQAVALRVTADQAIFYNCQMDGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKV-SYLGRPWKQYSKVVIMDSTIDAIFVPEGYMPWMGSAFKETCTYYEYNNKGPGADTNLRVKWHGVKVLTSNVAAEYYPGKFFEIVNATARDTWIVKSGVPYSLG 445          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.995e-51
Identity = 104/241 (43.15%), Postives = 145/241 (60.17%), Query Frame = -2
Query:  133 GSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQ-NTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 852
            G+TT  S T+ V  +GF+A+ +  QNTAGP  +QAVA RV+ D++VI  CR D YQDTLY +  RQFYR+  ++GTVDFI G +A V+QN  I  RK    Q+N VTA G+        G  +  C ++A  +LE  + +++SYLGRPWK ++ T V+ + IGD I P GW+EW G+    T  Y E+ NRGPGA  + RV W    +     E ++FTVA  +   +W++   V    GL
Sbjct:  333 GTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGNQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANPAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVTVQLGL 571          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.792e-36
Identity = 91/232 (39.22%), Postives = 124/232 (53.45%), Query Frame = -2
Query:  163 TFKSATIAVGGDGFIAQDLWIQNTA-----GPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLK 843
            T+ SA+ AV    F+A+++  +NT      G    QAVALRVSAD +    CR+   QDTLY H  R +Y+DC I G+VDFIFGNA  + + C + A   ++ +   VTAQGR+   ++TG S  KC+V  +  L         YLGR W  +SR V   +++ + I P GW  W       T++YG+Y   G GA    RV W     +TD EEAK F     I G  W+K
Sbjct:  166 TYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHA---IADKLGAVTAQGRSSVLEDTGFSFVKCKVTGTGVL---------YLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYKCTGAGANYGGRVAWA--RELTD-EEAKPFLSLTFIDGSEWIK 382          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.458e-33
Identity = 80/231 (34.63%), Postives = 118/231 (51.08%), Query Frame = -2
Query:  163 DGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLK 855
            DG    +S T+ +    F+ + L IQN  G    +AVALRV+AD++    C I +YQDTL       ++++C I G  DFI G+A+ + + C + +  P    +  +TAQ RT   + +G +   C++          GS  ++LGRPW  YSR V   S   + + P GW++W       T+YYGEY   GPGA   +RV+W         EEA  F   + IGG  WL+
Sbjct:  119 DGEDILESPTLTIFASDFVCRFLTIQNKFGTAG-RAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSP---NNGSITAQMRTSATEKSGFTFLGCKLT---------GSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYYGEYKCYGPGADREQRVEWSKQ---LSDEEATVFLSKDFIGGKDWLR 333          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.721e-31
Identity = 81/231 (35.06%), Postives = 116/231 (50.22%), Query Frame = -2
Query:  163 TFKSATIAVGGDGFIAQDLWIQNT----AGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLK 843
            T+++A++++  D F A  +  +NT    AG +  QAVALR+  D++V  R R+   QDTL+      ++  C I G VDFIFGNA  + Q+C I +    +K+   + A  R    ++TG S   C+         + G+ + YLGR W  YSRTV     I D I P GWS+W      + + +GEY  RG GA    RV W         +E K F   E I G  WL+
Sbjct:  164 TYRTASVSIESDFFCATAITFENTVVAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHS---TAKRYGAIAAHHRDSETEDTGFSFVNCD---------ISGTGQIYLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRKVMFGEYNCRGRGAERGGRVPW---SKTLTRDEVKPFLGREFIYGDQWLR 379          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.721e-31
Identity = 76/226 (33.63%), Postives = 116/226 (51.33%), Query Frame = -2
Query:  214 VDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPG-----------YHVITDPEE 858
            V G+ TF   ++ V G+ FIA+++  +N+A     QAVA+RV+AD+     CR   +QDTLY H  +Q+ +DC I G+VDFIFGN+  +L++C I       K    +TAQ R    ++TG    +C +  +        S   YLGRPW  + R V+  +++   I   GW  W      ++  + EY   GPG+ +S+RV W             +H   DPE+
Sbjct:   86 VIGTGTFGCGSVIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHC-----KSQGFITAQSRKSSQESTGYVFLRCVITGNGQ------SGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFYEYRCFGPGSCSSERVPWSRELMDDEAGHFVHHSFVDPEQ 300          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.929e-30
Identity = 83/237 (35.02%), Postives = 123/237 (51.90%), Query Frame = -2
Query:  163 TFKSATIAVGGDGFIAQDLWIQNTA-----GPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAAR----KPMSKQSN-MVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLK 843
            TF  AT+ V G  F+A+++   N A     G    QAVA+R++ D+S    C     QDTL+    R +++DC I G++DFIFGNA  + Q+C+I +      P SK  N  VTA GR+  ++N+G S   C          + G+   +LGR W+ YSR V + + + D I P GW+ ++      T++YGEY   GPGA  SKR   P    + + + A     +  I G  WL+
Sbjct:  165 TFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAIRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLSPGSKAVNGAVTANGRSSKDENSGFSFVNC---------TIGGTGHVWLGRAWRPYSRVVFVSTTMTDVIAPEGWNNFNDPSRDATIFYGEYNCSGPGADMSKRA--PYVQKLNETQVALLINTS-FIDGDQWLQ 389          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.397e-27
Identity = 76/233 (32.62%), Postives = 118/233 (50.64%), Query Frame = -2
Query:  166 TFKSATIAVGGDGFIAQDLWIQNTA-----GPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNM--VTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWL 843
            TF S ++AV G+ F A ++  +NTA     G    QAVAL+V  D++    C     QDTL     R F++ C I G++DFIFGN   + ++C + +   ++K++ +  +TA G+      TG     C++          GS R +LGR W+ Y+R +  ++++   +   GW++       +T+YYGE+   GPGA  SKRV    Y  +    EA  FT    I G  WL
Sbjct:  116 TFSSFSVAVFGEKFTAYNISFKNTAPAPNPGAVDAQAVALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHS---IAKENTIGCITANGKDTLKDRTGFVFVNCKIT---------GSARVWLGRAWRPYARVIFSKTYMSRVVSLDGWNDMGDPKTQRTVYYGEHRCYGPGANHSKRVT---YAKLLSDVEAAPFTNISFIDGEEWL 333          
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.935e-27
Identity = 77/238 (32.35%), Postives = 113/238 (47.48%), Query Frame = -2
Query:  151 TFKSATIAVGGDGFIAQDLWIQNTA-----GPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKI--AARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGV 843
            T  S +  V    F A ++  +N A     G    QAVALR+  DQ+    C     QDTL     R F+++C I G++DFIFGN   + Q+C I   A+   S  +  +TAQGR   ++ +G S   C++  S ++          LGR W  Y+  V   +++   I P GW+ W      KT+ +GE+   GPGA   +RV +     +TD  EA  F     I G  WL+ T +
Sbjct:  165 TADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKIDGSGEI---------LLGRAWGAYATVVFSNTYMSGIITPEGWNNWGDSTKEKTVTFGEHKCYGPGADYKERVLFG--KQLTD-SEASSFIDVSFIDGDEWLRHTNI 390          
The following BLAST results are available for this feature:
BLAST of CV884338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME_BRANA5.634e-5344.40Probable pectinesterase/pectinesterase inhibitor O... [more]
PME_MEDSA9.610e-5343.67Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME_BRACM8.995e-5143.15Pectinesterase/pectinesterase inhibitor (Fragment)... [more]
PME53_ARATH4.792e-3639.22Probable pectinesterase 53 OS=Arabidopsis thaliana... [more]
PME11_ARATH8.458e-3334.63Putative pectinesterase 11 OS=Arabidopsis thaliana... [more]
PME62_ARATH2.721e-3135.06Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT... [more]
PME31_ARATH2.721e-3133.63Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31... [more]
PME8_ARATH3.929e-3035.02Probable pectinesterase 8 OS=Arabidopsis thaliana ... [more]
PME14_ARATH1.397e-2732.62Putative pectinesterase 14 OS=Arabidopsis thaliana... [more]
PME15_ARATH6.935e-2732.35Probable pectinesterase 15 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002G07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T3_G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884338 ID=CV884338; Name=CV884338; organism=Citrus sinensis; type=EST; length=862bp
CATAAGCATTATTGCATTAGCCTACAACATTTATGAAACTAGTACAGCAC
GTTACTCGGATTCATTCATTATTCAACTGATAGAAAGCAGTGGCAAATAC
AAGCTTAAAAGATATATGCTGAGCTGACATCACAGCCCCTCAGTATAAGC
AACTCCAGTTGATTTCAACCACGACCCTCCTCCGATAAGCTCAGCTACTG
TAAATTTTTTTGCTTCTTCTGGGTCTGTAATAACGTGATAGCCAGGCCAT
TTCACTCTTTTGCTAGTCCCAGCACCTGGCCCTCTATTCAGATACTCCCC
ATAATACAGTGTCTTCAGTGCAAAATCTCCACTCCATTCTGACCATCCAG
CTGGATCGATATGATCCCCGATGTGTGACTGCATTACAACTGTTCTCGAG
TATTCTTTCCAAGGCCGGCCCAAGTACGAACGGATCGAGCCCTTTACGGG
CTCCAGATCTGAGCTTGCTATGACTTCACATTTTTGGATCGAAGTCCCTG
TGTTTTGATTTGGGTCAGTCCGTCCTTGGGCTGTGACCATGTTGGATTGC
TTGCTCATGGGCTTTCTGGCCGCGATTTTGCAGTTCTGTAAGACAACCGC
TGCATTGCCAAATATGAAATCAACCGTGCCGGTGATGTCGCAATCTCTGT
AGAATTGGCGATTCGTGTGGGCGTAGAGCGTGTCTTGGTAGGCGTCAATG
CGGCAGCGGTTGATGACCGACTGATCAGCGCTGACCCGTAGTGCCACGGC
TTGATGTTTCTCTGGCCCGGCTGTGTTTTGGATCCACAAATCTTGGGCTA
TAAATCCATCACCACCAACAGCTATCGTTGCTGATTTGAAGGTTGTAGAT
CCGTCAACGACG
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