CV884338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.634e-53 Identity = 107/241 (44.40%), Postives = 146/241 (60.58%), Query Frame = -2 Query: 133 GSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQ-NTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 852 G+TT S T+ V +GF+A+ + QNTAGP HQAVA RV+ D++VI CR D YQDTLY + RQFYR+ ++GTVDFIFG +A V+QN I RK Q+N VTA G G + C ++A +LE + +++SYLGRPWK ++ T V+ + IGD I P GW+EW G+ T Y E+ NRGPGA T+ RV W + E ++FTVA + +W++ V GL Sbjct: 346 GTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGHQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADGNEKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANTAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVPVQLGL 584
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 9.610e-53 Identity = 107/245 (43.67%), Postives = 140/245 (57.14%), Query Frame = -2 Query: 136 DGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEA-----KKFTVAELIGGGSWLKSTGVAYTEG 855 DG T+ +AT V G F+A+D+ +NTAG KHQAVALRV+ADQ++ C++D +QDTLY + RQFYRDC I+GT+DF+FG V QNCK+ R P Q +VTA GR N + Q L V + SYLGRPWK+YS+ V+M S I P G+ W G +T Y EY N+GPGA T+ RVKW G V+T A K F + +W+ +GV Y+ G Sbjct: 202 DGINTYNTATFGVNGANFMAKDIGFENTAGTGKHQAVALRVTADQAIFYNCQMDGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKV-SYLGRPWKQYSKVVIMDSTIDAIFVPEGYMPWMGSAFKETCTYYEYNNKGPGADTNLRVKWHGVKVLTSNVAAEYYPGKFFEIVNATARDTWIVKSGVPYSLG 445
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 8.995e-51 Identity = 104/241 (43.15%), Postives = 145/241 (60.17%), Query Frame = -2 Query: 133 GSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQ-NTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 852 G+TT S T+ V +GF+A+ + QNTAGP +QAVA RV+ D++VI CR D YQDTLY + RQFYR+ ++GTVDFI G +A V+QN I RK Q+N VTA G+ G + C ++A +LE + +++SYLGRPWK ++ T V+ + IGD I P GW+EW G+ T Y E+ NRGPGA + RV W + E ++FTVA + +W++ V GL Sbjct: 333 GTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGNQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANPAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVTVQLGL 571
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.792e-36 Identity = 91/232 (39.22%), Postives = 124/232 (53.45%), Query Frame = -2 Query: 163 TFKSATIAVGGDGFIAQDLWIQNTA-----GPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLK 843 T+ SA+ AV F+A+++ +NT G QAVALRVSAD + CR+ QDTLY H R +Y+DC I G+VDFIFGNA + + C + A ++ + VTAQGR+ ++TG S KC+V + L YLGR W +SR V +++ + I P GW W T++YG+Y G GA RV W +TD EEAK F I G W+K Sbjct: 166 TYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHA---IADKLGAVTAQGRSSVLEDTGFSFVKCKVTGTGVL---------YLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYKCTGAGANYGGRVAWA--RELTD-EEAKPFLSLTFIDGSEWIK 382
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 8.458e-33 Identity = 80/231 (34.63%), Postives = 118/231 (51.08%), Query Frame = -2 Query: 163 DGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLK 855 DG +S T+ + F+ + L IQN G +AVALRV+AD++ C I +YQDTL ++++C I G DFI G+A+ + + C + + P + +TAQ RT + +G + C++ GS ++LGRPW YSR V S + + P GW++W T+YYGEY GPGA +RV+W EEA F + IGG WL+ Sbjct: 119 DGEDILESPTLTIFASDFVCRFLTIQNKFGTAG-RAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSP---NNGSITAQMRTSATEKSGFTFLGCKLT---------GSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYYGEYKCYGPGADREQRVEWSKQ---LSDEEATVFLSKDFIGGKDWLR 333
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.721e-31 Identity = 81/231 (35.06%), Postives = 116/231 (50.22%), Query Frame = -2 Query: 163 TFKSATIAVGGDGFIAQDLWIQNT----AGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLK 843 T+++A++++ D F A + +NT AG + QAVALR+ D++V R R+ QDTL+ ++ C I G VDFIFGNA + Q+C I + +K+ + A R ++TG S C+ + G+ + YLGR W YSRTV I D I P GWS+W + + +GEY RG GA RV W +E K F E I G WL+ Sbjct: 164 TYRTASVSIESDFFCATAITFENTVVAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHS---TAKRYGAIAAHHRDSETEDTGFSFVNCD---------ISGTGQIYLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRKVMFGEYNCRGRGAERGGRVPW---SKTLTRDEVKPFLGREFIYGDQWLR 379
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.721e-31 Identity = 76/226 (33.63%), Postives = 116/226 (51.33%), Query Frame = -2 Query: 214 VDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPG-----------YHVITDPEE 858 V G+ TF ++ V G+ FIA+++ +N+A QAVA+RV+AD+ CR +QDTLY H +Q+ +DC I G+VDFIFGN+ +L++C I K +TAQ R ++TG +C + + S YLGRPW + R V+ +++ I GW W ++ + EY GPG+ +S+RV W +H DPE+ Sbjct: 86 VIGTGTFGCGSVIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHC-----KSQGFITAQSRKSSQESTGYVFLRCVITGNGQ------SGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFYEYRCFGPGSCSSERVPWSRELMDDEAGHFVHHSFVDPEQ 300
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 3.929e-30 Identity = 83/237 (35.02%), Postives = 123/237 (51.90%), Query Frame = -2 Query: 163 TFKSATIAVGGDGFIAQDLWIQNTA-----GPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAAR----KPMSKQSN-MVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLK 843 TF AT+ V G F+A+++ N A G QAVA+R++ D+S C QDTL+ R +++DC I G++DFIFGNA + Q+C+I + P SK N VTA GR+ ++N+G S C + G+ +LGR W+ YSR V + + + D I P GW+ ++ T++YGEY GPGA SKR P + + + A + I G WL+ Sbjct: 165 TFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAIRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLSPGSKAVNGAVTANGRSSKDENSGFSFVNC---------TIGGTGHVWLGRAWRPYSRVVFVSTTMTDVIAPEGWNNFNDPSRDATIFYGEYNCSGPGADMSKRA--PYVQKLNETQVALLINTS-FIDGDQWLQ 389
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.397e-27 Identity = 76/233 (32.62%), Postives = 118/233 (50.64%), Query Frame = -2 Query: 166 TFKSATIAVGGDGFIAQDLWIQNTA-----GPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNM--VTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWL 843 TF S ++AV G+ F A ++ +NTA G QAVAL+V D++ C QDTL R F++ C I G++DFIFGN + ++C + + ++K++ + +TA G+ TG C++ GS R +LGR W+ Y+R + ++++ + GW++ +T+YYGE+ GPGA SKRV Y + EA FT I G WL Sbjct: 116 TFSSFSVAVFGEKFTAYNISFKNTAPAPNPGAVDAQAVALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHS---IAKENTIGCITANGKDTLKDRTGFVFVNCKIT---------GSARVWLGRAWRPYARVIFSKTYMSRVVSLDGWNDMGDPKTQRTVYYGEHRCYGPGANHSKRVT---YAKLLSDVEAAPFTNISFIDGEEWL 333
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.935e-27 Identity = 77/238 (32.35%), Postives = 113/238 (47.48%), Query Frame = -2 Query: 151 TFKSATIAVGGDGFIAQDLWIQNTA-----GPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKI--AARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGV 843 T S + V F A ++ +N A G QAVALR+ DQ+ C QDTL R F+++C I G++DFIFGN + Q+C I A+ S + +TAQGR ++ +G S C++ S ++ LGR W Y+ V +++ I P GW+ W KT+ +GE+ GPGA +RV + +TD EA F I G WL+ T + Sbjct: 165 TADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKIDGSGEI---------LLGRAWGAYATVVFSNTYMSGIITPEGWNNWGDSTKEKTVTFGEHKCYGPGADYKERVLFG--KQLTD-SEASSFIDVSFIDGDEWLRHTNI 390 The following BLAST results are available for this feature:
BLAST of CV884338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884338 ID=CV884338; Name=CV884338; organism=Citrus sinensis; type=EST; length=862bpback to top |