CV884338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME_ASPTU (Pectinesterase OS=Aspergillus tubingensis GN=pme1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.655e-20 Identity = 66/191 (34.55%), Postives = 95/191 (49.74%), Query Frame = -2 Query: 271 KSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFG-NAAVVLQNCKIAARKPMSKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFA-LKTLYYGEYLNRGPGA 837 ++AT+ +G +L I NT G HQA+A+ A + C+ YQDTL A T Q Y I G VDFIFG +A C I + S S +TA GR+ + ++ I K V A+ + G+ YLGRPW +Y+R ++ + D I+ GW+EWS + + + EY N G GA Sbjct: 110 ETATLRNYAEGSAIYNLNIANTCGQACHQALAVSAYASEQGYYACQFTGYQDTLLAETGYQVYAGTYIEGAVDFIFGQHARAWFHECDIRVLEGPSSAS--ITANGRSSESDDSYYVIHKSTVAAADGNDVSSGTY--YLGRPWSQYARVCFQKTSMTDVINHLGWTEWSTSTPNTENVTFVEYGNTGTGA 296
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME57_ARATH (Putative pectinesterase 57 OS=Arabidopsis thaliana GN=PME57 PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.655e-20 Identity = 49/90 (54.44%), Postives = 59/90 (65.56%), Query Frame = -2 Query: 574 TFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKI 843 TF +AT A GDGFI D+ +NT P K V LRV+ D S+I RCR++ YQD LY H NRQ YR+ + TVDFI GNAA V Q C+I Sbjct: 152 TFNTATFASNGDGFIRVDMCFRNTTWPVKGPVVTLRVNGDMSIIYRCRVEEYQDALYPHKNRQCYREYFLMDTVDFICGNAAAVFQFCQI 241
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.075e-19 Identity = 56/170 (32.94%), Postives = 79/170 (46.47%), Query Frame = -2 Query: 247 AVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQ--SNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKW 750 AVA + D+S QDTL+ R ++ C I G VDFIFG + Q+C I + + +TAQGRT+P G C V G+ ++LGRPW+ YSR + S++ D + P GW W+ L + E+ G GA +RVKW Sbjct: 144 AVAALIGGDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINCLVY---------GTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEHGCFGSGANIGRRVKW 304
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PMEA_ERWCH (Pectinesterase A OS=Erwinia chrysanthemi GN=pemA PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.004e-17 Identity = 85/269 (31.60%), Postives = 121/269 (44.98%), Query Frame = -2 Query: 181 DGST--TFKSATIAVGGDGFIAQDLWIQN--------------TAGPEKHQAVALRV--SADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVT---AQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSY-LGRPW--------------KEYSRTVVMQSHIGDHIDPAGWSEWSG-DFALKTLYYG-------EYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIG 855 DGS T S+TI + F AQ L I+N ++ + QAVAL V S D++ + YQDTLY R F+ DC I+GTVDFIFG+ + NC + +R +S V+ T+ NQ G I VI SD P K SY LGRPW +TV + + + +HI GW + SG D T+++ EY + G GA SK +TD +A ++T ++++G Sbjct: 103 DGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRESDSVPAK----SYGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNHI--YGWDKMSGKDKNGNTIWFNPEDSRFFEYKSYGAGAAVSK-----DRRQLTD-AQAAEYTQSKVLG 359
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PMEA_DICD3 (Pectinesterase A OS=Dickeya dadantii (strain 3937) GN=pemA PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.712e-17 Identity = 85/269 (31.60%), Postives = 121/269 (44.98%), Query Frame = -2 Query: 181 DGST--TFKSATIAVGGDGFIAQDLWIQN--------------TAGPEKHQAVALRV--SADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVT---AQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSY-LGRPW--------------KEYSRTVVMQSHIGDHIDPAGWSEWSG-DFALKTLYYG-------EYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIG 855 DGS T S+TI + F AQ L I+N ++ + QAVAL V S D++ + YQDTLY R F+ DC I+GTVDFIFG+ + NC + +R +S V+ T+ NQ G I VI SD P K SY LGRPW +TV + + + +HI GW + SG D T+++ EY + G GA SK +TD +A ++T ++++G Sbjct: 103 DGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRESDSVPAK----SYGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNHI--YGWDKMSGKDKNGNTIWFNPEDSRFFEYKSYGAGATVSK-----DRRQLTD-AQAAEYTQSKVLG 359
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 8.498e-17 Identity = 57/200 (28.50%), Postives = 93/200 (46.50%), Query Frame = -2 Query: 160 AVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKI--AARKPMSKQS-NMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKS 750 AVA+ V D+S C QDT++ + R +++C I G +DFIFG+ V ++C I A SK S +TAQGR+ + +G + V GS YLGR + +SR + +Q+ + + P GW W + Y E +G G+ S+RV W + ++F+++ I W+ + Sbjct: 101 AVAISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLR---------GSVSGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMSFTYAEVECKGAGSDMSRRVPW--IDKLHSFYTKQQFSISNFIDQDQWISN 289
BLAST of CV884338 vs. ExPASy Swiss-Prot
Match: PME66_ARATH (Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.227e-15 Identity = 60/212 (28.30%), Postives = 87/212 (41.04%), Query Frame = -2 Query: 247 DGSTTFKSATIAVGGDGFIAQDLWIQNTAG------PEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCDITGTVDFIFGNAAVVLQNCKIAARKPMSKQSN---MVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKW 855 D T SAT D + + +NT E AVA R+ D+ V+ QDTL+ R +Y+ C I+G +DFIFG + + C + + N +TA R P+ G C V G ++ LGR W +R + +S + D + P GW W + L + E G GA TS+RV W Sbjct: 101 DHQATDISATFTAFADDIVISGITFKNTYNIVPNNKREIVPAVAARMLGDRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGGIDFIFGYGQSLFKECTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDC---------TVTGVGKTLLGRAWGSNARVIFDRSRLSDVVLPIGWDAWRAKGNERDLTFVEAGCTGAGADTSQRVPW 303 The following BLAST results are available for this feature:
BLAST of CV884338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884338 ID=CV884338; Name=CV884338; organism=Citrus sinensis; type=EST; length=862bpback to top |