CV884337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_CHAGL (Pyruvate dehydrogenase E1 component subunit beta OS=Chaetosphaeridium globosum GN=pdhB PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.880e-25 Identity = 53/147 (36.05%), Postives = 96/147 (65.31%), Query Frame = -3 Query: 392 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRAC 832 + ++ +++ + L + KA++ R G D+TI +S++ L+AA++L +G E+I++ S++PLD TI+ SVRKT++++ VEE G+GA + A+++E+ F YLDAP++ ++ DVP PY+ LE + V Q I++A + C Sbjct: 177 YNLNENLIEQEYLLCLEKAEVVRPGNDITILTYSRMRHHVLQAAKVLVNKGYDPEIIDILSLKPLDMGTISLSVRKTHKVLIVEECMRTGGIGASLRAAILEDLFDYLDAPIQCLSSQDVPTPYSGPLEELTVIQPNQIIQAVEEMC 323
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ACOB_RALEH (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoB PE=1 SV=3) HSP 1 Score: 113.62 bits (283), Expect = 1.429e-24 Identity = 57/150 (38.00%), Postives = 91/150 (60.67%), Query Frame = -3 Query: 398 LYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 847 LYG + EV + ++ +P G+A I R+GKDV+I + +V +L+AA LAKEGI AE+++LR++ PLD T+ SV T RLV V+E P+ + +I A V +++F L A +E + P+P++ LE + +P I AA++ Sbjct: 186 LYG----LEGEVPEGAYAIPFGEANIVRDGKDVSIVTYGLMVHRALEAAATLAKEGIEAEIVDLRTLSPLDMDTVLESVENTGRLVVVDEASPRCNIATDISAQVAQQAFGALKAGIEMVCPPHTPVPFSPTLEDLYIPSAAQIAAAARK 331
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ACOB_BACSU (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Bacillus subtilis GN=acoB PE=3 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 1.867e-24 Identity = 57/141 (40.43%), Postives = 88/141 (62.41%), Query Frame = -3 Query: 413 SFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIV 835 S+ + EV + + +P+GKA I+REG DVT+ A K V +L+AA L++ GI AEV++ RS+ PLD I S+ KTNRL+ ++E P+ + +I A V ++ F LDAP++RI P+P++ LE +P + IV Sbjct: 189 SYNMKGEVPEDYYTIPLGKADIKREGNDVTLFAVGKQVNTALEAAAQLSERGIEAEVLDPRSLSPLDEDAIFTSLEKTNRLIIIDEANPRCSIATDIAALVADKGFDLLDAPIKRITAPHTPVPFSPVLEDQYLPTPDKIV 329
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_STAES (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.438e-24 Identity = 58/139 (41.73%), Postives = 90/139 (64.75%), Query Frame = -3 Query: 401 EVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 817 EV + + + IGKA +++EG D+T+ ++ +V SLKAAE L K+G S EVI+LR+++P+D T+ ASV KT R V V+E Q GVGA++ A + E + L+AP+ R+A +D P+ E + +P +DI+ AK Sbjct: 183 EVPEEEYKIDIGKANVKKEGNDITLISYGAMVQESLKAAEELEKDGYSVEVIDLRTVQPIDIDTLVASVEKTGRAVVVQEAQRQAGVGAQVAAELAERAILSLEAPIARVAASDTIYPF-TQAENVWLPNKKDIIEQAK 320
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_STAEQ (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.438e-24 Identity = 58/139 (41.73%), Postives = 90/139 (64.75%), Query Frame = -3 Query: 401 EVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 817 EV + + + IGKA +++EG D+T+ ++ +V SLKAAE L K+G S EVI+LR+++P+D T+ ASV KT R V V+E Q GVGA++ A + E + L+AP+ R+A +D P+ E + +P +DI+ AK Sbjct: 183 EVPEEEYKIDIGKANVKKEGNDITLISYGAMVQESLKAAEELEKDGYSVEVIDLRTVQPIDIDTLVASVEKTGRAVVVQEAQRQAGVGAQVAAELAERAILSLEAPIARVAASDTIYPF-TQAENVWLPNKKDIIEQAK 320
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_STAAW (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MW2) GN=pdhB PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.264e-24 Identity = 59/139 (42.45%), Postives = 87/139 (62.59%), Query Frame = -3 Query: 401 EVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 817 EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EVI+LR+++P+D TI ASV KT R V V+E Q GVGA + A + E + L+AP+ R+A AD P+ E + +P DI+ AK Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPF-TQAENVWLPNKNDIIEKAK 320
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_STAAU (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus GN=pdhB PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.264e-24 Identity = 59/139 (42.45%), Postives = 87/139 (62.59%), Query Frame = -3 Query: 401 EVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 817 EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EVI+LR+++P+D TI ASV KT R V V+E Q GVGA + A + E + L+AP+ R+A AD P+ E + +P DI+ AK Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPF-TQAENVWLPNKNDIIEKAK 320
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_STAAS (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MSSA476) GN=pdhB PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.264e-24 Identity = 59/139 (42.45%), Postives = 87/139 (62.59%), Query Frame = -3 Query: 401 EVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 817 EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EVI+LR+++P+D TI ASV KT R V V+E Q GVGA + A + E + L+AP+ R+A AD P+ E + +P DI+ AK Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPF-TQAENVWLPNKNDIIEKAK 320
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_STAAR (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MRSA252) GN=pdhB PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.264e-24 Identity = 59/139 (42.45%), Postives = 87/139 (62.59%), Query Frame = -3 Query: 401 EVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 817 EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EVI+LR+++P+D TI ASV KT R V V+E Q GVGA + A + E + L+AP+ R+A AD P+ E + +P DI+ AK Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPF-TQAENVWLPNKNDIIEKAK 320
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_STAAN (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain N315) GN=pdhB PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.264e-24 Identity = 59/139 (42.45%), Postives = 87/139 (62.59%), Query Frame = -3 Query: 401 EVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 817 EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EVI+LR+++P+D TI ASV KT R V V+E Q GVGA + A + E + L+AP+ R+A AD P+ E + +P DI+ AK Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPF-TQAENVWLPNKNDIIEKAK 320 The following BLAST results are available for this feature:
BLAST of CV884337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884337 ID=CV884337; Name=CV884337; organism=Citrus sinensis; type=EST; length=858bpback to top |