CV884337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_STAAM (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhB PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.264e-24 Identity = 59/139 (42.45%), Postives = 87/139 (62.59%), Query Frame = -3 Query: 401 EVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 817 EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EVI+LR+++P+D TI ASV KT R V V+E Q GVGA + A + E + L+AP+ R+A AD P+ E + +P DI+ AK Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPF-TQAENVWLPNKNDIIEKAK 320
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_STAAC (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain COL) GN=pdhB PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.264e-24 Identity = 59/139 (42.45%), Postives = 87/139 (62.59%), Query Frame = -3 Query: 401 EVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 817 EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EVI+LR+++P+D TI ASV KT R V V+E Q GVGA + A + E + L+AP+ R+A AD P+ E + +P DI+ AK Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPF-TQAENVWLPNKNDIIEKAK 320
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_PORPU (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra purpurea GN=pdhB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.580e-23 Identity = 54/144 (37.50%), Postives = 90/144 (62.50%), Query Frame = -3 Query: 401 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 832 + + E+ + + +P+ KA++ R+GKD+TI +S++ +A +L +G EV++L S++PLD +I+ SV+KT+R++ VEE G+GAE+ A + E F LDAPV R++ D+P PY +LE+ V Q I+ A K Sbjct: 177 YNLQEEIPEDEYLIPLDKAEVVRKGKDITILTYSRMRHHVTEALPLLLNDGYDPEVLDLISLKPLDIDSISVSVKKTHRVLIVEECMKTAGIGAELIAQINEHLFDELDAPVVRLSSQDIPTPYNGSLEQATVIQPHQIIDAVK 320
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_PORYE (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra yezoensis GN=pdhB PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.005e-23 Identity = 56/144 (38.89%), Postives = 88/144 (61.11%), Query Frame = -3 Query: 401 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 832 + + E+ + LP+ K + R+GKD+TI +S++ ++A L KEG EVI+L S++PLD +I+ SV+KT++++ VEE G+GAE+ A + E F LDAPV R++ D+P PY +LE+ V Q IV + K Sbjct: 177 YNLQEEIPQEEYFLPLNKVEFVRKGKDITILTYSRMRHHVIQALPALLKEGYDPEVIDLISLKPLDIDSISISVKKTHKVLIVEECMKTAGIGAELIAQINEYLFDELDAPVVRLSSQDIPTPYNGSLEQATVIQPSQIVDSVK 320
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_CYAME (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon merolae GN=pdhB PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.842e-23 Identity = 53/144 (36.81%), Postives = 87/144 (60.42%), Query Frame = -3 Query: 401 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 832 + + E+ + LP+ KA++ REG DVTI +S+++ ++A + L +G++ EVI+L S++P+D T+ SV KT++ + VEE G+ AE+ A + +F LDAP+ R++ DVP PY LE+ + Q IV A K Sbjct: 178 YNLKQEIPKQEYVLPLDKAQVVREGSDVTIITYSRMLHHVMQAVKQLVAQGMNPEVIDLISLKPIDLETLVTSVSKTHKAIIVEECMQTGGIAAEVMAQIYSHAFDELDAPIRRLSSKDVPTPYNGYLEQACLVQPTQIVEAVK 321
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_BACSU (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus subtilis GN=pdhB PE=3 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.338e-22 Identity = 55/140 (39.29%), Postives = 89/140 (63.57%), Query Frame = -3 Query: 398 EVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 817 EV + + + +GKA ++REG D++I + +V SLKAA+ L K+GISAEV++LR++ PLD TI ASV KT R + V+E Q G+ A + A + + + L+APV R+A D P+ + E + +P +D++ A++ Sbjct: 183 EVPEEEYTIELGKADVKREGTDLSIITYGAMVHESLKAADELEKDGISAEVVDLRTVSPLDIDTIIASVEKTGRAIVVQEAQKQAGIAANVVAEINDRAILSLEAPVLRVAAPDTVFPF-SQAESVWLPNHKDVLETARK 321
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODBB_BACSU (2-oxoisovalerate dehydrogenase subunit beta OS=Bacillus subtilis GN=bfmBAB PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.980e-22 Identity = 57/144 (39.58%), Postives = 88/144 (61.11%), Query Frame = -3 Query: 398 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVP-MPYAANLERMAVPQVEDIVRAAKR 826 + EV + LPIGKA ++REG D+T+ + V +L+AAE L K+GISA V++LR++ PLD+ I + KT +++ V E + + +E+ A + E LDAP++R+AG D+P MPYA +E+ + D V AA R Sbjct: 180 IKGEVPADDYVLPIGKADVKREGDDITVITYGLCVHFALQAAERLEKDGISAHVVDLRTVYPLDKEAIIEAASKTGKVLLVTEDTKEGSIMSEVAAIISEHCLFDLDAPIKRLAGPDIPAMPYAPTMEKYFMVN-PDKVEAAMR 322
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_GRATL (Pyruvate dehydrogenase E1 component subunit beta OS=Gracilaria tenuistipitata var. liui GN=pdhB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.083e-22 Identity = 53/139 (38.13%), Postives = 87/139 (62.59%), Query Frame = -3 Query: 401 EVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 817 E+ + + LP+ KA++ R+G DVTI +S++ ++A L +G + EVI+L S++PLD ++I S+ KT++L+ VEE G+GAEI A + + F +LDAP+ R++ D+P PY LE+ V + I+ A K Sbjct: 182 ELPNDEYFLPLDKAELVRDGLDVTILTYSRMRHHVMQAVVDLVNDGYNPEVIDLISLKPLDITSIAQSLMKTHKLIIVEECMKTGGIGAEIIAQINDNYFDFLDAPIVRLSSQDIPTPYNGKLEKATVIYPQQIIEAVK 320
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODBB_THET8 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.671e-22 Identity = 58/144 (40.28%), Postives = 86/144 (59.72%), Query Frame = -3 Query: 395 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRA 826 V EV + + LPIGKA + REGKD+T+ + ++ L+AA LAK G+SAEV++LR++ P D + SV KT R+V V + +E+ A++ E+ L AP R+ G D P PYA +++ +P V I+ AAKRA Sbjct: 180 VKEEVPEEDYTLPIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEVLDLRTLMPWDYEAVMNSVAKTGRVVLVSDAPRHASFVSEVAATIAEDLLDMLLAPPIRVTGFDTPYPYAQ--DKLYLPTVTRILNAAKRA 321
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_STAPU (Pyruvate dehydrogenase E1 component subunit beta OS=Staurastrum punctulatum GN=pdhB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.479e-21 Identity = 50/139 (35.97%), Postives = 89/139 (64.03%), Query Frame = -3 Query: 392 DSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRAC 808 D+ + + + KA+I R G D+TI +S++ L+A + L +G E+I++ S++P+D TI+ S++KT++++ VEE G+GA + A+++E F +LDAP+ ++ DVP PY+ LE + V Q IV+A ++ C Sbjct: 185 DNEYLVCLEKAEIVRPGTDITILTYSRMRHHVLQATKSLVYKGYDPEIIDIVSLKPVDLGTISTSIKKTHKVLIVEECMRTGGIGASLRATIMEHLFDFLDAPIMCLSSQDVPTPYSGPLEELTVIQPAQIVQAVEQLC 323 The following BLAST results are available for this feature:
BLAST of CV884337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884337 ID=CV884337; Name=CV884337; organism=Citrus sinensis; type=EST; length=858bpback to top |