CV884337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_LEIXX (Pyruvate dehydrogenase E1 component subunit beta OS=Leifsonia xyli subsp. xyli GN=pdhB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.295e-21 Identity = 57/133 (42.86%), Postives = 86/133 (64.66%), Query Frame = -3 Query: 395 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRA 793 LP+ ++I R G D TI A++ +V ++L+AAEI A+EG S EV++LRS+ P+D + + SV+KT RLV +E VG+E+ A V E++F L+APV R+AG D P P A LE + +P + I+ R+ Sbjct: 203 LPLHASRIVRSGTDATIVAWAGMVPVALRAAEIAAEEGRSLEVVDLRSLAPIDYAPVLRSVQKTGRLVVAQEAPGIVSVGSEVAAVVGEKAFYSLEAPVLRVAGFDTPFP-PAKLESLYLPDADRILEVVDRS 334
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_ZYGCR (Pyruvate dehydrogenase E1 component subunit beta OS=Zygnema circumcarinatum GN=pdhB PE=3 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 5.620e-21 Identity = 49/147 (33.33%), Postives = 90/147 (61.22%), Query Frame = -3 Query: 392 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRAC 832 + + ++ + + + + KA++ R G D+TI +S++ L+A + L +G E+I++ S++P D TI ASV KT++++ VEE G+GA + A+++E F YLDAP+ ++ DVP PY++ LE + V Q I++ ++ C Sbjct: 177 YNLKEDLAEEEYLVCLEKAEVVRPGNDITILTYSRMRHNVLQATKSLVYKGYDPEIIDIVSLKPFDLGTIGASVCKTHKVLIVEECMRTGGIGATLRAAIMEHFFDYLDAPILCLSSQDVPTPYSSPLEELTVIQPNQIIQVVEQLC 323
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_CHAVU (Pyruvate dehydrogenase E1 component subunit beta OS=Chara vulgaris GN=pdhB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.340e-21 Identity = 48/145 (33.10%), Postives = 88/145 (60.69%), Query Frame = -3 Query: 398 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 832 + + + + +P+ KA++ R G +TI +S++ L+AA+ L ++G E+I++ S++PLD TI+ S+RKT++++ VEE G+G + ++++E F +LD P+ ++ DVP PY LE + V Q IV AA++ Sbjct: 177 YNIKENIPQKEYLVPLEKAELVRSGNQITILTYSRMRYHVLQAAKTLIEKGYDPEIIDIISLKPLDMGTISTSLRKTHKVLIVEECMKTGGIGTTLKSAILESLFDFLDTPIMSLSSQDVPTPYNGFLEDLTVIQPSQIVEAAEK 321
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODBB_THET2 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1756 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.340e-21 Identity = 57/144 (39.58%), Postives = 85/144 (59.03%), Query Frame = -3 Query: 395 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRA 826 V EV + + L IGKA + REGKD+T+ + ++ L+AA LAK G+SAEV++LR++ P D + SV KT R+V V + +E+ A++ E+ L AP R+ G D P PYA +++ +P V I+ AAKRA Sbjct: 180 VKEEVPEEDYTLSIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEVLDLRTLMPWDYEAVMNSVAKTGRVVLVSDAPRHASFVSEVAATIAEDLLDMLLAPPIRVTGFDTPYPYAQ--DKLYLPTVTRILNAAKRA 321
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_CYACA (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidium caldarium GN=pdhB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.758e-20 Identity = 52/134 (38.81%), Postives = 81/134 (60.45%), Query Frame = -3 Query: 413 VLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIV 814 V D + LP+ KA++ R G DVTI +S++ L A E L G E+I+L S++PLD TI+ S++KT+++V VEE G+ AE+ + + + LD+P R++ DVP+PY NLE+ + Q + IV Sbjct: 183 VPDEEYYLPLDKAEVVRSGSDVTIVTYSRMRYHVLAAVEKLVLNGQDPEIIDLISLKPLDLHTISKSIKKTHKIVIVEECAQTGGIAAELISLINTYLYDELDSPAVRLSSKDVPIPYNGNLEKSTLIQPDQIV 316
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_MESVI (Pyruvate dehydrogenase E1 component subunit beta OS=Mesostigma viride GN=pdhB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.028e-19 Identity = 46/145 (31.72%), Postives = 89/145 (61.38%), Query Frame = -3 Query: 398 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 832 + + AEV D+ + LP+ KA+I R+G D+TI +S++ ++A ++L ++G E+I+L S++P D TI S++KT++++ VEE G+ + + ++E F LD ++ +VP PY+ LE +++ Q DI+ + ++ Sbjct: 177 YNLKAEVPDNDYVLPLEKAEIVRQGNDITILTYSRMRYNVIQAVKVLVEKGYDPEIIDLISLKPFDIETIGKSIQKTHKVLIVEESMMTGGISNVLQSLILENFFDDLDNRPMCLSSPNVPTPYSGPLEEVSIVQTADIIESVEQ 321
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_ACHLA (Pyruvate dehydrogenase E1 component subunit beta OS=Acholeplasma laidlawii GN=pdhB PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.260e-19 Identity = 53/134 (39.55%), Postives = 79/134 (58.96%), Query Frame = -3 Query: 416 EVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDI 817 EV + +PIGKAK+ ++G D+T+ A+ IV KA +++ EGIS E+I+LR+I P+D TI SV+KT + + V E +G AE+ V E++F +L+A R G D+ +P A E PQ E I Sbjct: 183 EVPAEMYEIPIGKAKVVKQGTDMTVVAWGSIVREVEKAVKLVEAEGISVEIIDLRTISPIDEETILNSVKKTGKFMVVTEAVKSYGPAAELITMVNEKAFFHLEAAPVRFTGFDITVPLARG-EHYHFPQPEKI 315
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_CHLAT (Pyruvate dehydrogenase E1 component subunit beta OS=Chlorokybus atmophyticus GN=pdhB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.531e-18 Identity = 48/142 (33.80%), Postives = 83/142 (58.45%), Query Frame = -3 Query: 407 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRA 832 + + EV D+ + LP+ KA++ REG D+T+ +S+ ++A ++L +EG EVI+L S++P D TI S++KT++++ VEE G+ + + +I+ F LDA ++ +VP PY LE V Q DI+ + Sbjct: 177 YNLKGEVPDNDYLLPLEKAELVREGSDITVLTYSRQRYNVIQAVKVLVEEGYDPEVIDLISLKPFDMETIGKSIQKTHKVLIVEECMMTGGISNVLQSLIIDNFFDALDAAPLILSSPNVPTPYTGPLEEATVVQTIDIIES 318
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODBB_PSEPU (2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas putida GN=bkdA2 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.531e-18 Identity = 52/119 (43.70%), Postives = 72/119 (60.50%), Query Frame = -3 Query: 458 VLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYA 814 V D + +P+ KA I R G DV++ + V ++ AAE + G+ AEVI+LRS+ PLD TI SV+KT R V V E G GAE+ + V E F +L+AP+ER+ G D P P+A Sbjct: 202 VPDGYYTVPLDKAAITRPGNDVSVLTYGTTVYVAQVAAE---ESGVDAEVIDLRSLWPLDLDTIVESVKKTGRCVVVHEATRTCGFGAELVSLVQEHCFHHLEAPIERVTGWDTPYPHA 317
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODBB_PSEAE (2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas aeruginosa GN=bkdA2 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.210e-17 Identity = 49/122 (40.16%), Postives = 75/122 (61.48%), Query Frame = -3 Query: 458 SAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYA 823 +++V D + +P+ KA I R G +T+ + +V ++ AA+ + G+ AE+I+LRS+ PLD TI ASV+KT R V E G GAE+ + V E F +L+AP+ER+ G D P P+A Sbjct: 210 ASQVPDGYYKVPLDKAAIVRPGAALTVLTYGTMVYVAQAAAD---ETGLDAEIIDLRSLWPLDLETIVASVKKTGRCVIAHEATRTCGFGAELMSLVQEHCFHHLEAPIERVTGWDTPYPHA 328 The following BLAST results are available for this feature:
BLAST of CV884337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884337 ID=CV884337; Name=CV884337; organism=Citrus sinensis; type=EST; length=858bpback to top |