CV884337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: DXS_PELTS (1-deoxy-D-xylulose-5-phosphate synthase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=dxs PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.313e-13 Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = -3 Query: 545 YGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEI 844 Y S + DS +P+G+A++ R+G +VT+ A +V L++KAAEILA GI A VIN R ++PLD+ I R+T + T+EE Q G G+ + Sbjct: 471 YPRSAGTGCRMDDSFKIIPLGRAEVLRDGTEVTLLAVGSMVCLAVKAAEILAGHGIDAAVINARFVKPLDKECILRYARRTREVFTLEENVLQGGFGSAV 570
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: DXS_SYNPX (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain WH8102) GN=dxs PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.633e-13 Identity = 48/134 (35.82%), Postives = 72/134 (53.73%), Query Frame = -3 Query: 410 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGAD------VPMPYAANLERMAVPQVEDIVR 793 LPIG+ ++ REG D+ I A+ +V +L A +L + G+S VIN R +RPLD++ I+ R+ R+VT+EEG G GA + S+ ++ S P+ RI D P +LE + V E I R Sbjct: 493 LPIGRGELLREGDDLLIVAYGSMVHPALDTATLLEEAGLSTTVINARFLRPLDQALIHPLARRIRRVVTMEEGALAGGFGAAVLESLSDQDIS---IPLLRIGIPDKMVDHATPQQSKESLEMIPVQMAERIRR 623
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: DXS_HELMI (1-deoxy-D-xylulose-5-phosphate synthase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=dxs PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.633e-13 Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = -3 Query: 545 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEI 793 +PIG+ ++ R+G DVTI A +VG++ +AA++L EGI A V+N R ++PLD+ I R+T R+VTVEE G G+ I Sbjct: 489 VPIGRGELLRQGSDVTIVAIGAMVGIAEEAADLLEAEGIRAAVVNARFVKPLDKELIIKQARETGRIVTVEEHVLAGGFGSAI 571
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: DXS_ANAVT (1-deoxy-D-xylulose-5-phosphate synthase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dxs PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.633e-13 Identity = 46/119 (38.66%), Postives = 68/119 (57.14%), Query Frame = -3 Query: 437 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMA 793 L IGK +I R G DV I + +V S++AAEIL++ GI A VIN R ++PLD I +K R+VT+EEG G G+ + ++++ + PV+RI DV + +A E A Sbjct: 494 LEIGKGEILRNGDDVLIIGYGTMVYPSMQAAEILSEHGIEATVINARFVKPLDTELIVPLAQKIGRVVTLEEGCVMGGFGSAVAEALLDAD---VVVPVKRIGIPDVLVEHATPDESKA 609
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: DXS_ANASP (1-deoxy-D-xylulose-5-phosphate synthase OS=Anabaena sp. (strain PCC 7120) GN=dxs PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.633e-13 Identity = 46/119 (38.66%), Postives = 68/119 (57.14%), Query Frame = -3 Query: 437 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMA 793 L IGK +I R G DV I + +V S++AAEIL++ GI A VIN R ++PLD I +K R+VT+EEG G G+ + ++++ + PV+RI DV + +A E A Sbjct: 494 LEIGKGEILRNGDDVLIIGYGTMVYPSMQAAEILSEHGIEATVINARFVKPLDTELIVPLAQKIGRVVTLEEGCVMGGFGSAVAEALLDAD---VVVPVKRIGIPDVLVEHATPDESKA 609
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: DXS_DESHY (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfitobacterium hafniense (strain Y51) GN=dxs PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.357e-13 Identity = 46/121 (38.02%), Postives = 66/121 (54.55%), Query Frame = -3 Query: 488 LLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERI 850 L Y S E+ + LP+GKA+I +EGKD+T+ +V L AA L G+ A VINLR I PLDR +I R T R++TVE+ G+G+ + + +E + D VER+ Sbjct: 469 LRYPRSVGQGVELTEELRELPVGKAEILQEGKDITLIGVGPMVYTCLAAAVELRHRGVEATVINLRYINPLDRESILRYARMTKRIITVEDHMLAGGMGSAVMEVLGDEGLT--DVVVERL 587
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: DXS_DESHD (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dxs PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.357e-13 Identity = 46/121 (38.02%), Postives = 66/121 (54.55%), Query Frame = -3 Query: 488 LLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERI 850 L Y S E+ + LP+GKA+I +EGKD+T+ +V L AA L G+ A VINLR I PLDR +I R T R++TVE+ G+G+ + + +E + D VER+ Sbjct: 469 LRYPRSVGQGVELTEELRELPVGKAEILQEGKDITLIGVGPMVYTCLAAAVELRHRGVEATVINLRYINPLDRESILRYARMTKRIITVEDHMLAGGMGSAVMEVLGDEGLT--DVVVERL 587
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_MYCGE (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma genitalium GN=pdhB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.255e-12 Identity = 44/122 (36.07%), Postives = 70/122 (57.38%), Query Frame = -3 Query: 458 EVLDSSFCLPIGKAKIEREGKDVTITAFSKIVG--LSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYA 817 E+ + +PIG+A + EG ++TI ++ + ++L + L +GI E+I+LR+I P D+ T+ SV+KT RL+ V E AEI SV EE F+YL +R+ G D+ +P A Sbjct: 185 EIPSDYYTVPIGEANLISEGSELTIVSYGPTMFDLINLVYSGELKDKGI--ELIDLRTISPWDKQTVFNSVKKTGRLLVVTEAVKSFTTSAEIITSVTEELFTYLKKAPQRVTGFDIVVPLA 304
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: DXS_SYNSC (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain CC9605) GN=dxs PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.255e-12 Identity = 40/109 (36.70%), Postives = 65/109 (59.63%), Query Frame = -3 Query: 515 GESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFS 841 GE P+ E ++ LPIG+ ++ REG D+ I A+ +V +L A +L + G+S VIN R +RPLD++ I+ R+ R+VT+EEG G GA + S+ ++ + Sbjct: 480 GEGVPLMEEGWET---LPIGRGELLREGDDLMIVAYGSMVAPALATATLLEEAGLSTTVINARFLRPLDQALIHPLARRIPRVVTMEEGALPGGFGAAVLESLTDQDIN 585
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: DXS_NOSP7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dxs PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.639e-12 Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = -3 Query: 458 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYA 793 L IGK++I R G DV I A+ +V ++AAEIL++ GI A VIN R ++PLD I +K R++T+EEG G G+ I ++++ + PV+R DV + +A Sbjct: 494 LEIGKSEILRTGDDVLIVAYGTMVYPGMQAAEILSEHGIEATVINARFVKPLDTELILPLAKKIGRVITLEEGCIMGGFGSAIAEALMDAD---ILVPVKRFGVPDVLVDHA 602 The following BLAST results are available for this feature:
BLAST of CV884337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884337 ID=CV884337; Name=CV884337; organism=Citrus sinensis; type=EST; length=858bpback to top |