CV884337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: DXS_CYAP4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dxs PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.639e-12 Identity = 43/112 (38.39%), Postives = 67/112 (59.82%), Query Frame = -3 Query: 458 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYA 793 LPIGKA++ R+G D+ + A+ +V +L+AAEIL + GI+A V+N R +PLD I K R+VTVEEG G G+ + ++ ++ + PV RI D+ + +A Sbjct: 492 LPIGKAEVLRQGDDLLMLAYGSMVYPTLQAAEILREHGIAATVVNARFAKPLDTELILPLAEKLGRVVTVEEGCLIGGFGSAVLEALQDQE---ILVPVTRIGIPDILVEHA 600
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_MYCPN (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma pneumoniae GN=pdhB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.651e-12 Identity = 44/122 (36.07%), Postives = 70/122 (57.38%), Query Frame = -3 Query: 458 EVLDSSFCLPIGKAKIEREGKDVTITAFSKIVG--LSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYA 817 E+ + +PIG+A + +G ++TI ++ + +++ L +GI E+I+LR+I P D+ T+ SV+KT RL+ V E EI ASV EE FSYL A +R+ G D+ +P A Sbjct: 186 EIPADYYTVPIGQANLISQGNNLTIVSYGPTMFDLINMVYGGELKDKGI--ELIDLRTISPWDKETVFNSVKKTGRLLVVTEAAKTFTTSGEIIASVTEELFSYLKAAPQRVTGWDIVVPLA 305
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: DXS_SYNJA (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain JA-3-3Ab) GN=dxs PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.769e-12 Identity = 43/119 (36.13%), Postives = 69/119 (57.98%), Query Frame = -3 Query: 437 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMA 793 +PIGKA++ R G +V I A+ +V SL+AAEIL + GIS V+N R +PLD I +++ +VTVEEG G G+ + ++++ + P+ R+ DV + +A E +A Sbjct: 499 IPIGKAEVLRSGGEVLILAYGSMVHPSLQAAEILKEHGISTTVVNARFAKPLDTELILPLAQQSRLVVTVEEGCLMGGFGSAVGEALLDAD---IRVPLLRLGVPDVWVEHATPEESLA 614
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: DXS_MICAN (1-deoxy-D-xylulose-5-phosphate synthase OS=Microcystis aeruginosa (strain NIES-843) GN=dxs PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.228e-12 Identity = 45/135 (33.33%), Postives = 72/135 (53.33%), Query Frame = -3 Query: 404 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMA-----VPQVEDIVRAA 793 LPIGK +I R G D+ + + +V SL+ AEIL++ GI A V+N R ++PLD I ++ ++VT+EEG G G+ + ++ + + + PV+R D + +A E A PQ+ V AA Sbjct: 494 LPIGKGEILRSGDDILLLGYGTMVNTSLQVAEILSEHGIEATVVNARFVKPLDTELIFPLAQRLGKVVTLEEGCLMGGFGSAVLEALQDAN---ILVPVKRFGVPDKLVDHATPEESFADLGLTSPQIAQQVLAA 625
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: DXS_GLOVI (1-deoxy-D-xylulose-5-phosphate synthase OS=Gloeobacter violaceus GN=dxs PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.134e-12 Identity = 40/105 (38.10%), Postives = 61/105 (58.10%), Query Frame = -3 Query: 527 GESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE 841 G P+ AE D +PIGKA++ R G D+ I A +V SL+AA +L++ GI A V+N R +PLD + R+ R+VTVEEG G G+ + ++++ Sbjct: 483 GSGAPLMAEGWDP---VPIGKAEVLRSGDDLLIVAIGTMVHPSLQAAALLSEHGIDATVVNARFAKPLDTELLLPLARRIGRVVTVEEGCRMGGFGSAVLEALMD 584
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: DXS_CYAP7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain PCC 7424) GN=dxs PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.134e-12 Identity = 39/119 (32.77%), Postives = 67/119 (56.30%), Query Frame = -3 Query: 437 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMA 793 LPIGK +I R G D+ + + +V +++ AEIL + GI A V+N R ++PLD I ++T ++VT+EEG G G+ + ++++ + + PV+R D + +A E A Sbjct: 493 LPIGKGEILRNGDDLLLLGYGTMVNTAMQVAEILGEHGIEATVVNARFVKPLDTDLIVPLAKQTGKVVTLEEGCLMGGFGSAVAEALLDHN---VLVPVKRFGVPDQLVDHAKPDESFA 608
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: DXS_LYSSC (1-deoxy-D-xylulose-5-phosphate synthase OS=Lysinibacillus sphaericus (strain C3-41) GN=dxs PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.062e-11 Identity = 38/125 (30.40%), Postives = 68/125 (54.40%), Query Frame = -3 Query: 476 LLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGAD 850 L Y + + D LPIG ++ REGKD +I F + ++++AA++LA++GI EV+N R I+P+D+ ++ + ++T+EE + G G+ + YL+A V+R+ D Sbjct: 471 LRYPRGNGIGVPLDDELVALPIGSWEVLREGKDASILTFGTTIPMAMQAADMLAQQGIDIEVVNARFIKPMDKDMLHRILSNHKPILTIEEAVLKGGFGSGVLE--FAHDHGYLNAIVDRMGIPD 593
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: DXS1_GEOMG (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dxs1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.388e-11 Identity = 40/93 (43.01%), Postives = 52/93 (55.91%), Query Frame = -3 Query: 515 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFS 793 LPIGK +I REG D + A V + +AAE LA EGI V+N R ++PLDR I + R T RL+ VEE Q G G + + EE + Sbjct: 490 LPIGKGEILREGLDGALLAIGSTVYPAREAAEALAAEGIDLAVVNARFVKPLDRDLILSLARTTGRLIIVEENVIQGGFGTAVLELLEEEGIN 582
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: DXS_SYNS3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain CC9311) GN=dxs PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.367e-11 Identity = 43/122 (35.25%), Postives = 67/122 (54.92%), Query Frame = -3 Query: 476 GESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGAD 841 GE P+ E ++ LPIG ++ REG DV I A+ +V ++ A+ LA G+ VIN R +RPLD + I+ ++ ++VT+EEG G G+ + S+ E+ L P+ RI D Sbjct: 480 GEGVPLMEEGWEA---LPIGCGEVVREGNDVLIVAYGAMVPKAMATAKCLAAVGVEVAVINARYLRPLDEALIHPMAKQIGKIVTMEEGALAGGFGSAVLESLQEKG---LAIPMLRIGIPD 595
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: DXS_PROMP (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dxs PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.037e-11 Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = -3 Query: 455 LPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAA 793 L IG+ +I EG DV I A+ +V + + A +L GISA +IN R +RPLD+ I VRK ++VT+EEG G G+ I + + ++ PV RI DV + +A+ Sbjct: 493 LKIGEGEILEEGDDVLIIAYGSMVQSATETANLLKNRGISACIINARFVRPLDQDLIIPLVRKLKKVVTMEEGTLVGGFGSAIVEMLNDND---INIPVLRIGIPDVLVDHAS 602 The following BLAST results are available for this feature:
BLAST of CV884337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884337 ID=CV884337; Name=CV884337; organism=Citrus sinensis; type=EST; length=858bpback to top |