CV884336
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884336 vs. ExPASy Swiss-Prot
Match: ODPB_HUMAN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens GN=PDHB PE=1 SV=3) HSP 1 Score: 326.635 bits (836), Expect = 1.201e-88 Identity = 157/254 (61.81%), Postives = 197/254 (77.56%), Query Frame = 2 Query: 155 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRVIRPLDRSTINAS 916 A Q+ VR+A+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS G VPIVFRGPNGA+AGV AQHS C+AAWY PGLKV+SP++SEDA+GL+K+AIRD +PVV LENEL+YG F E F +PIGKAKIER+G +T+ + S+ VG L+AA +L+KEG+ EVIN+R IRP+D TI AS Sbjct: 29 AALQVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEAS 282
BLAST of CV884336 vs. ExPASy Swiss-Prot
Match: ODPB_ZYMMO (Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas mobilis GN=pdhB PE=3 SV=2) HSP 1 Score: 321.242 bits (822), Expect = 5.047e-87 Identity = 164/248 (66.13%), Postives = 197/248 (79.44%), Query Frame = 2 Query: 164 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRVIRPLDRSTI 907 Q +REAL A+ EEM D +VF+MGEEV EYQGAYK+++GLL+++G RV+DTPI+E GF+GIGVGAA GL+PV+EFMT NFSMQAIDHIINSAAK++YMS GQ+ PIVFRGPNGAA VGAQH+ + WYA+VPGL VL+PY + DA+GLLKAAIR DPVVFLE ELLYG++F V F LPIGKA+I REGKDVTI ++S V +L AAE LAKEGI AEVI+LR +RPLD+ TI Sbjct: 138 QQTLREALRDAMAEEMRRDDRVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPISEYGFSGIGVGAAMEGLRPVIEFMTMNFSMQAIDHIINSAAKTHYMSGGQVRCPIVFRGPNGAAPRVGAQHTQNFGPWYAAVPGLVVLAPYDAIDAKGLLKAAIRSDDPVVFLECELLYGKTFDVPKM---DDFVLPIGKARIIREGKDVTIVSYSIGVSFALTAAEALAKEGIDAEVIDLRTLRPLDKETI 382
BLAST of CV884336 vs. ExPASy Swiss-Prot
Match: ODPB_RHIME (Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium meliloti GN=pdhB PE=3 SV=2) HSP 1 Score: 317.005 bits (811), Expect = 9.519e-86 Identity = 158/247 (63.97%), Postives = 196/247 (79.35%), Query Frame = 2 Query: 167 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRVIRPLDRSTI 907 M VREAL A+ EEM A+ VF+MGEEV EYQGAYK+++GLL+++G RV+DTPITE GF G+GVGAA GL+P+VEFMTFNF+MQAID IINSAAK+ YMS GQ+ PIVFRGP+GAAA V AQHS CYAAWY+ +PGLKV+ PY++ DA+GLLKAAIRDP+PV+FLENE+LYG+SF V LD F LPIGKA+I R GKD T+ +F + ++KAA L +GI E+I+LR IRP+D T+ Sbjct: 138 MTVREALRDAMAEEMRANEDVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPITEHGFAGVGVGAAMTGLRPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGAPIVFRGPSGAAARVAAQHSQCYAAWYSHIPGLKVVMPYTAADAKGLLKAAIRDPNPVIFLENEILYGQSFEVPK--LD-DFVLPIGKARIHRTGKDATLVSFGIGMTYAIKAAAELEAQGIDVEIIDLRTIRPMDLPTV 381
BLAST of CV884336 vs. ExPASy Swiss-Prot
Match: ODPB_ASCSU (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Ascaris suum PE=1 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 2.344e-84 Identity = 156/261 (59.77%), Postives = 192/261 (73.56%), Query Frame = 2 Query: 134 NLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRVIRPLDRSTINAS 916 ++R +S + VR+ALN+ALDEE+ D +VFL+GEEV +Y GAYKISKGL +KYG R+ DTPITE G+ VGAA GL+P+ EFM+ NFSMQ IDHIINSAAK++YMS+G+ VPIVFRG NGAA GV QHS + AW+ PG+KV+ PY EDARGLLKAA+RD +PV+ LENE+LYG FPVS E F LP G+AKI+R GKD+TI + S V +SL AA+ LAK GI EVINLR +RPLD T+ S Sbjct: 23 SVRRLASGTLNVTVRDALNAALDEEIKRDDRVFLIGEEVAQYDGAYKISKGLWKKYGDGRIWDTPITEMAIAGLSVGAAMNGLRPICEFMSMNFSMQGIDHIINSAAKAHYMSAGRFHVPIVFRGANGAAVGVAQQHSQDFTAWFMHCPGVKVVVPYDCEDARGLLKAAVRDDNPVICLENEILYGMKFPVSPEAQSPDFVLPFGQAKIQRPGKDITIVSLSIGVDVSLHAADELAKSGIDCEVINLRCVRPLDFQTVKDS 283
BLAST of CV884336 vs. ExPASy Swiss-Prot
Match: ODPB_RICBR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia bellii (strain RML369-C) GN=pdhB PE=3 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 5.223e-84 Identity = 155/248 (62.50%), Postives = 195/248 (78.63%), Query Frame = 2 Query: 164 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRVIRPLDRSTI 907 Q+ VREAL A+ EEM D KVF+MGEEV EYQGAYK+++GLLE++GP+RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA+DHI+NSAAK++YMS GQ+ PIVFRGPNGAA+ V AQHS YAA Y+ +PGLKV++PYS+ED +GL+ AIRD +PV+FLENE+LYG SF +S V +P GKAK+ +EG VTI FS V L+L AA IL + I+ EVI+LR I+PLD TI Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAMDHIVNSAAKTHYMSGGQVRCPIVFRGPNGAASRVAAQHSQNYAACYSYIPGLKVVAPYSAEDHKGLMITAIRDDNPVIFLENEILYGHSFDISENVEP----IPFGKAKVLKEGDSVTIVTFSIQVKLALDAANILQSDNINCEVIDLRTIKPLDIDTI 245
BLAST of CV884336 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 7.542e-83 Identity = 154/248 (62.10%), Postives = 190/248 (76.61%), Query Frame = 2 Query: 164 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRVIRPLDRSTI 907 Q+ VREAL A+ EEM D KVF+MGEEV EYQGAYK+++GLLE++GP+RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ PIVFRGPNGAA+ V AQHS Y A Y+ VPGLKV++PYS+ED +GL+ AIRD +PV+FLENE+LYG SF V + +P G+AKI REG VTI FS V L+L AA +L + I EVI+LR I+PLD TI Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQAKCPIVFRGPNGAASRVAAQHSQNYTACYSHVPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFDVPETIEP----IPFGQAKILREGSSVTIVTFSIQVKLALDAANVLQNDNIDCEVIDLRTIKPLDTDTI 245
BLAST of CV884336 vs. ExPASy Swiss-Prot
Match: ODPB_RICCN (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia conorii GN=pdhB PE=3 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 3.743e-82 Identity = 152/248 (61.29%), Postives = 190/248 (76.61%), Query Frame = 2 Query: 164 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRVIRPLDRSTI 907 Q+ VREAL A+ EEM D KVF++GEEV EYQGAYK+++GLLE++GP+RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ+ PIVFRGPNGAA+ V AQHS Y A Y+ +PGLKV++PYS+ED +GL+ AIRD +PVVFLENE+LYG SF V + +P G+AKI REG VTI FS V L+L AA + + I EVI+LR I+PLD TI Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVVFLENEILYGHSFDVPKTIEP----IPFGQAKILREGSSVTIVTFSIQVKLALDAANFVQNDNIDCEVIDLRTIKPLDTETI 245
BLAST of CV884336 vs. ExPASy Swiss-Prot
Match: ODPB_RICPR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia prowazekii GN=pdhB PE=3 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 1.019e-79 Identity = 148/248 (59.68%), Postives = 189/248 (76.21%), Query Frame = 2 Query: 164 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRVIRPLDRSTI 907 Q+ VREAL A+ EEM D KVF++GEEV EYQGAYK+++GLLE++G +RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ+ PIVFRGPNGAA+ V AQHS Y A Y+ +PGLKV++PYS+ED +GL+ AIRD +PV+FLENE+LYG SF +V D +P KAKI +EG +VTI FS V L+L IL + I E+I+LR I+PLD +I Sbjct: 2 QITVREALRDAMQEEMLRDEKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF----DVPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKLALDVVNILQNDNIDCELIDLRTIKPLDTDSI 245
BLAST of CV884336 vs. ExPASy Swiss-Prot
Match: ODPB_RICTY (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia typhi GN=pdhB PE=3 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 1.331e-79 Identity = 148/248 (59.68%), Postives = 189/248 (76.21%), Query Frame = 2 Query: 164 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRVIRPLDRSTI 907 Q+ VREAL A+ EEM D KVF++GEEV EYQGAYK+++GLLE++G +RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ+ PIVFRGPNGAA+ V AQHS Y A Y+ +PGLKV++PYS+ED +GL+ AIRD +PV+FLENE+LYG SF +V D +P KAKI +EG +VTI FS V L+L IL + I E+I+LR I+PLD + I Sbjct: 2 QITVREALRDAMQEEMLRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF----DVPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKLALDVVNILQNDNIDCELIDLRTIKPLDTNMI 245
BLAST of CV884336 vs. ExPASy Swiss-Prot
Match: ODPB_CYAME (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon merolae GN=pdhB PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 6.018e-56 Identity = 112/251 (44.62%), Postives = 168/251 (66.93%), Query Frame = 2 Query: 164 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRVIRPLDRSTINAS 916 ++ + EAL A+DEEM+ D +VF++GE+VG Y G+YK++K L KYG RVLDTPI E FTG+ +GAA GLKPVVE M +F + A + I N+A +Y S G S+P+V RGP G + A+HS A++ +VPGLK+++ + +A+GLLKAAIRD +PV+FLE+ LLY + E+ + LP+ KA++ REG DVTI +S+++ ++A + L +G++ EVI+L ++P+D T+ S Sbjct: 4 KLFMYEALREAIDEEMARDKRVFVLGEDVGHYGGSYKVTKQLHTKYGDLRVLDTPIAENSFTGMAIGAAMTGLKPVVEGMNLSFLLLAFNQISNNAGMLHYTSGGNWSIPLVIRGPGGIGKQLSAEHSQRIEAYFQAVPGLKIVACSTPYNAKGLLKAAIRDNNPVLFLEHVLLYN----LKQEIPKQEYVLPLDKAQVVREGSDVTIITYSRMLHHVMQAVKQLVAQGMNPEVIDLISLKPIDLETLVTS 250 The following BLAST results are available for this feature:
BLAST of CV884336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 193
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884336 ID=CV884336; Name=CV884336; organism=Citrus sinensis; type=EST; length=916bpback to top |