CV884319

Overview
NameCV884319
Unique NameCV884319
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884319 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.253e-11
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = -1
Query:  464 SW--DPTLVNPCTWFHITCNQDNR-----VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSL 748
            SW  DP +     W  + C   +      +T LDL +S L+G +   +  L HLQ L+L  NN+ G +P  L ++KSL+ ++L  NN+SG +PPSL + K +
Sbjct:  375 SWQGDPCVPKQLLWDGLNCKNSDISTPPIITSLDLSSSGLTGIITQAIKNLTHLQILDLSDNNLTGEVPEFLADIKSLLVINLSGNNLSGSVPPSLLQKKGM 476          
BLAST of CV884319 vs. ExPASy Swiss-Prot
Match: PII2_ARATH (Piriformospora indica-insensitive protein 2 OS=Arabidopsis thaliana GN=PII-2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.253e-11
Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = -1
Query:  353 CNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSN-----DLCGT 700
            CN   R+ RL    ++ +G +      L+ L  L+L +N+  GT+P   G+L SL+ LDL NN + G +P  L  LK+L  L L +NR +G + + +  I SL  + +S+N     D+ GT
Sbjct:  188 CNL-KRLKRLVFAGNSFAGMIPNCFKGLKELLILDLSRNSFSGTLPTSFGDLVSLLKLDLSNNLLEGNLPQELGFLKNLTLLDLRNNRFSGGLSKNIENIQSLTELVLSNNPMGEEDMVGT 307          
BLAST of CV884319 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.637e-11
Identity = 51/162 (31.48%), Postives = 77/162 (47.53%), Query Frame = -1
Query:  269 SWDPTLVNPCTWFHITCNQDNR-VTRLDLGNSNLSGRLVPE-LGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEGPELLG 748
            +W+ T     +W  +TC  D   V  L L    L G + P  LGKLE L+ L L  N + G +P ++ +L SL  + L +NN SG++P  ++  + L  L L+ N  TG+IP     +  L  + + +N L G +P         LN   N+     P  LG
Sbjct:   66 NWNSTNHICKSWVGVTCTSDGTSVHALRLPGIGLLGPIPPNTLGKLESLRILSLRSNLLSGNLPPDIHSLPSLDYIYLQHNNFSGEVPSFVS--RQLNILDLSFNSFTGKIPATFQNLKQLTGLSLQNNKLSGPVPNLDTVSLRRLNLSNNHLNGSIPSALG 225          
BLAST of CV884319 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.792e-11
Identity = 46/139 (33.09%), Postives = 69/139 (49.64%), Query Frame = -1
Query:  257 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEGPELLGLASY 673
            L L ++ LSG++  +   L HL+ L L  N   G  P     L +LI LD+ +NN +G IP S+  L  L  L L +N  +G +P   +G+      +VS+N+L G+IP+S         +F  N  L G  L    S+
Sbjct:   96 LSLRSNRLSGQIPSDFSNLTHLRSLYLQHNEFSGEFPTSFTQLNNLIRLDISSNNFTGSIPFSVNNLTHLTGLFLGNNGFSGNLPSISLGLVDF---NVSNNNLNGSIPSS--LSRFSAESFTGNVDLCGGPLKPCKSF 229          
BLAST of CV884319 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.792e-11
Identity = 40/111 (36.04%), Postives = 62/111 (55.86%), Query Frame = -1
Query:  440 SW--DPTLVNPCTWFHITCNQDN-----RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLA-KLKSLVFLRLNDN 748
            SW  DP +     W  +TC   N     R+  LDL +S L+G +VPE+  L  L+ L+   NN+ G +P  L  +KSL+ ++L  NN+SG +P +L  K+K+ + L +  N
Sbjct:  385 SWQGDPCVPQQLLWDGLTCEYTNMSTPPRIHSLDLSSSELTGIIVPEIQNLTELKKLDFSNNNLTGGVPEFLAKMKSLLVINLSGNNLSGSVPQALLNKVKNGLKLNIQGN 495          
BLAST of CV884319 vs. ExPASy Swiss-Prot
Match: TMKL1_ARATH (Putative kinase-like protein TMKL1 OS=Arabidopsis thaliana GN=TMKL1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.792e-11
Identity = 41/113 (36.28%), Postives = 66/113 (58.41%), Query Frame = -1
Query:  347 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKL-KSLVFLRLNDNRLTGQIPRELVGIS---SLKVVDVSSNDLCGTIP 673
            L L ++NL+G L  E+G+   LQ + L  N++ G+IP+ELG   SL  +DL  N ++G +PPS+  L   LV  +++ N L+G +P   +  S   +L+V+D+  N   G  P
Sbjct:  104 LQLPSANLTGSLPREIGEFSMLQSVFLNINSLSGSIPLELGYTSSLSDVDLSGNALAGVLPPSIWNLCDKLVSFKIHGNNLSGVLPEPALPNSTCGNLQVLDLGGNKFSGEFP 216          
BLAST of CV884319 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.646e-11
Identity = 49/155 (31.61%), Postives = 84/155 (54.19%), Query Frame = -1
Query:  341 ALYALRRSLSDPDNVLQSWDPTLVNPC--TWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 799
            AL  +  S++ P  + Q W  +  +PC   W  ITC+  +RVT++ L +  LSG L   L KL  +   ++  NN+ G +P +L    +L  L+L NN  +G    S++ +  L +L L  N+L  Q+  +   ++SL ++D+SSN   G++P +
Sbjct:   34 ALNIMFSSMNSPGQLSQ-WTASGGDPCGQNWKGITCS-GSRVTQIKLPSLGLSGSLGFMLDKLTSVTEFDMSNNNLGGDLPYQLP--PNLERLNLANNQFTGSAQYSISMMAPLKYLNLAHNQLK-QLAIDFTKLTSLSILDLSSNAFIGSLPNT 183          
BLAST of CV884319 vs. ExPASy Swiss-Prot
Match: RLK_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RLK OS=Arabidopsis thaliana GN=RLK PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.646e-11
Identity = 61/188 (32.45%), Postives = 84/188 (44.68%), Query Frame = -1
Query:  275 DNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRL-VPELGKLEHLQYLELYKNNIQGTIP--VELGNLKSLI----------------------SLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEGPEL 763
            +N L SW+     PCTW  + CN  + V RL + N  LSG + +  L  L  L+ L    N  +G  P   +L  LKSL                        + L  N  +G+IP S+AKL  L+ LRL+ N+ TG+IP        L ++++S+N L G IP S          FE N  L G  L
Sbjct:   50 ENALASWNAKSP-PCTWSGVLCNGGS-VWRLQMENLELSGSIDIEALSGLTSLRTLSFMNNKFEGPFPDFKKLAALKSLYLSNNQFGGDIPGDAFEGMGWLKKVHLAQNKFTGQIPSSVAKLPKLLELRLDGNQFTGEIPE---FEHQLHLLNLSNNALTGPIPES--LSMTDPKVFEGNKGLYGKPL 230          
BLAST of CV884319 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.762e-11
Identity = 49/151 (32.45%), Postives = 71/151 (47.02%), Query Frame = -1
Query:  347 HITC-------NQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVE-----------LGN------------LKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 709
            +ITC       N    V R+ L + NL+G + PE  KL HL+ L+L +N++ G+IP E           +GN            L  L +L L  N  SG IPP + +L  L  L L  N  TG +  +L  + +L  + +S N+  G IP
Sbjct:   76 NITCDCSFLPQNSSCHVIRIALKSQNLTGIVPPEFSKLRHLKVLDLSRNSLTGSIPKEWASMRLEDLSFMGNRLSGPFPKVLTRLTMLRNLSLEGNQFSGPIPPDIGQLVHLEKLHLPSNAFTGPLTEKLGLLKNLTDMRISDNNFTGPIP 226          
BLAST of CV884319 vs. ExPASy Swiss-Prot
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.762e-11
Identity = 44/131 (33.59%), Postives = 69/131 (52.67%), Query Frame = -1
Query:  341 NPC--TWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 727
            +PC   W  + C+  N +T + +    + G L   L     +Q ++   N+I GTIP  L +  S+ +L L +N  +G IP +L+ L  L  L L  N L+G+IP     +S L  +D+SSN L G +P+S
Sbjct:   55 DPCGEKWQGVVCDSSN-ITEIRIPGMKVGGGLSDTLADFSSIQVMDFSSNHISGTIPQALPS--SIRNLSLSSNRFTGNIPFTLSFLSDLSELSLGSNLLSGEIPDYFQQLSKLTKLDLSSNILEGHLPSS 182          
The following BLAST results are available for this feature:
BLAST of CV884319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
Y5182_ARATH1.253e-1136.27Probable LRR receptor-like serine/threonine-protei... [more]
PII2_ARATH1.253e-1134.71Piriformospora indica-insensitive protein 2 OS=Ara... [more]
Y5830_ARATH1.637e-1131.48Probable inactive receptor kinase At5g58300 OS=Ara... [more]
Y2267_ARATH2.792e-1133.09Probable inactive receptor kinase At2g26730 OS=Ara... [more]
Y1756_ARATH2.792e-1136.04Probable LRR receptor-like serine/threonine-protei... [more]
TMKL1_ARATH2.792e-1136.28Putative kinase-like protein TMKL1 OS=Arabidopsis ... [more]
SRF7_ARATH3.646e-1131.61Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
RLK_ARATH3.646e-1132.45Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH4.762e-1132.45Probable LRR receptor-like serine/threonine-protei... [more]
SUB_ARATH4.762e-1133.59Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002F06_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T7_F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884319 ID=CV884319; Name=CV884319; organism=Citrus sinensis; type=EST; length=802bp
GATAGAAACACTTGGCTAGTATTGTATTACATCTAAAATTCTCATCTTGA
AAGTTGAAACATTTTTATGAAGATCACAACGACGCTATTACAGATGCATT
TAAGCAGTATAATACAATTTACATATATGATGGCTTCATTTCACCAATAA
CACTACGCTTTTTAGGTAAAGACGCTTTCGATCTTCGCGGACACATCTAT
TCGAAACCTGAGTAGAGCTTGAAGCAACAATCAATCGTTTATGAGCAGTT
TGTGTCATAACTTGCAAGTCCCAGCAACTCTGGACCTTCTAATCGAGGGT
TATTCTCAAAGTTGTTGAGTGGGATGTGTTCAAATGGTCCGCTTGTAGGA
ATTGTTCCACACAGATCATTGCTTGAAACATCCACAACTTTGAGACTTGA
AATTCCAACAAGTTCCCTGGGAATTTGTCCAGTTAGCCGATTATCGTTAA
GCCGCAAAAAAACAAGAGATTTCAATTTAGCCAAGGAAGGAGGGATTTTC
CCCGAGATGTTGTTATTATACAAGTCCAAGCTGATGAGGCTCTTCAAGTT
ACCGAGCTCGACAGGGATAGTTCCTTGGATGTTGTTTTTGTAAAGTTCCA
GGTATTGCAAATGCTCGAGCTTGCCCAGTTCAGGGACGAGACGGCCGGAT
AGATTTGAATTACCCAAATCCAGTCGAGTAACGCGGTTGTCCTGATTACA
GGTTATGTGAAACCAAGTGCAGGGATTGACGAGAGTTGGATCCCAGCTCT
GAAGCACGTTATCGGGATCTGATAAGCTTCTCCTGAGCGCGTACAGCGCG
TC
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