EY665257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: PABP1_BOVIN (Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.914e-14 Identity = 37/82 (45.12%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 80 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEVLMIVALRQAS 325 P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLL++D++E+LH+LESPE+L++K EA+ VL ++A+ Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAA 623
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: PABP_USTMA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.317e-13 Identity = 44/87 (50.57%), Postives = 58/87 (66.67%), Query Frame = 2 Query: 38 AGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEVL 298 AG P D QP +TA ALA ASPE+Q+ +LGE++YP V + + A K+TGM+L++ TE+LHLLE EAL K EA+EVL Sbjct: 547 AGRPEAD----QPGALTA--AALAKASPEEQKQMLGEAIYPKVAASQPELAGKLTGMILELPVTELLHLLEESEALDAKVNEALEVL 627
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: PABPB_XENLA (Polyadenylate-binding protein 1-B OS=Xenopus laevis GN=pabpc1-B PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.317e-13 Identity = 37/82 (45.12%), Postives = 61/82 (74.39%), Query Frame = 2 Query: 80 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEVLMIVALRQAS 325 P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLL++D++E+LH+LESPE+L++K EA+ VL ++A+ Sbjct: 542 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAA 621
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 1.317e-13 Identity = 37/82 (45.12%), Postives = 61/82 (74.39%), Query Frame = 2 Query: 80 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEVLMIVALRQAS 325 P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLL++D++E+LH+LESPE+L++K EA+ VL ++A+ Sbjct: 542 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAA 621
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.317e-13 Identity = 36/73 (49.32%), Postives = 58/73 (79.45%), Query Frame = 2 Query: 80 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEVL 298 P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLL++D++E+LH+LESPE+L++K EA+ VL Sbjct: 553 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 623
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: PABP_CRYNE (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans GN=PAB1 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.721e-13 Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = 2 Query: 26 VDMGAGIPRRDASVGQPMPITALSTA--LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEVL 298 + G +P R P P A LA A+P +Q+ +LGE+LYPL+ + + + A K+TGMLL+MD+ E+LHL+ES AL+ K EA+ VL Sbjct: 549 IPRGGQMPARPHEQAAPAPQAGRLDAQSLARAAPAEQKQMLGEALYPLIHETQPELAGKITGMLLEMDNAELLHLVESQPALQEKVDEALRVL 641
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.247e-13 Identity = 37/87 (42.53%), Postives = 61/87 (70.11%), Query Frame = 2 Query: 80 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEVLMIVALRQASYPSDQ 340 P+TA + LA A P++Q+ +LGE +YP++ ++ A K+TGMLL++D++E+LH+LESPE+L +K EA+ VL ++ + S Q Sbjct: 541 PLTA--SLLAGAPPQEQKQMLGERIYPVIHEMHPTLAGKITGMLLEIDNSELLHMLESPESLHSKVEEAVAVLQAHQAKENAQKSAQ 625
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 5.007e-13 Identity = 34/80 (42.50%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 86 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEVLMIVALRQAS 325 T ++ LA+A P++Q+ +LGE L+PL++ + A K+TGMLL++D++E+L++LESPE+L++K EA+ VL ++A+ Sbjct: 539 TLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRSKVDEAVAVLQAHQAKEAT 618
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: EPABB_XENLA (Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-B PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.238e-12 Identity = 35/73 (47.95%), Postives = 55/73 (75.34%), Query Frame = 2 Query: 80 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEVL 298 P+TA + LA A ++Q+ +LGE +YPL+ ++ A K+TGMLL++D++E+LH+LESPE+L +K EA+ VL Sbjct: 541 PLTA--SLLAAAPLQEQKQILGERIYPLIHEMHPTLAGKITGMLLEIDNSELLHMLESPESLHSKVEEAVAVL 611
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: PABP_ASPOR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.229e-12 Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = 2 Query: 35 GAGIPRRDASVGQPMPITA---LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEV 295 G G A G+P A + AL+ A P QQ+ +LGE+LYP ++ + + A K+TGMLL+M++TE+L LLE EAL+ K EA+ V Sbjct: 641 GRGQNAAQAPAGRPEEAVAGGLTAQALSAAPPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMENTELLSLLEDEEALRAKVDEALNV 730 The following BLAST results are available for this feature:
BLAST of EY665257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665257 ID=EY665257; Name=EY665257; organism=Citrus sinensis; type=EST; length=943bpback to top |