EY665254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665254 vs. ExPASy Swiss-Prot
Match: RBS2_CHRVI (Ribulose bisphosphate carboxylase small chain 2 OS=Chromatium vinosum GN=cbbS2 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.951e-14 Identity = 38/110 (34.55%), Postives = 61/110 (55.45%), Query Frame = 2 Query: 221 KFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCINFIAAKP 550 ++ET SYLPPL+ E +L++I Y++ +GW LE H+ P YW MWK+P +G D +L E+ ++ YP VR++G+D Q + +F+A +P Sbjct: 15 RYETFSYLPPLNREEILEQILYILDNGWNASLE------------HEHPDRAFEYYWPMWKMPFFGEQDPNVILTEIESCRRSYPDHHVRLVGYDTYAQSKGHSFLAHRP 112
BLAST of EY665254 vs. ExPASy Swiss-Prot
Match: RBS_RHOCA (Ribulose bisphosphate carboxylase small chain OS=Rhodobacter capsulatus GN=cbbS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.121e-13 Identity = 38/114 (33.33%), Postives = 59/114 (51.75%), Query Frame = 2 Query: 218 KKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCINFIAAKPPGV 559 +K T SYLPP+ + + +++ +++++GW P +E H P + YW MWKLPM+G TD +L E+ + P VR+IG+DN Q Q N I + V Sbjct: 17 RKMGTFSYLPPMGEAEIRRQVEWIVKNGWNPGIE------------HTEPDFAAQIYWYMWKLPMFGETDVDAILAELKACHEANPGHHVRLIGYDNFTQSQGANMIVYRGTAV 118
BLAST of EY665254 vs. ExPASy Swiss-Prot
Match: RBS_NITVU (Ribulose bisphosphate carboxylase small chain OS=Nitrobacter vulgaris GN=cbbS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.240e-12 Identity = 40/116 (34.48%), Postives = 59/116 (50.86%), Query Frame = 2 Query: 191 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCINFI 538 M V LKK+ET SYLP ++ E + ++I + I GW P +E EKG + YW MWKLP++G V+ E+ +E+P VR + +DN Q Q + F+ Sbjct: 1 MAVQAYRSLKKYETFSYLPQMTPEQVRRQIAHAIAQGWNPAVE-HTEKGTPAK----------ASYWYMWKLPLFGEQSVDAVVAEIEACHREFPDQMVRFVAYDNYAQSQGMAFV 105
BLAST of EY665254 vs. ExPASy Swiss-Prot
Match: RBS1_THIFE (Ribulose bisphosphate carboxylase small chain 1 OS=Thiobacillus ferrooxidans GN=cbbS1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.619e-12 Identity = 38/106 (35.85%), Postives = 53/106 (50.00%), Query Frame = 2 Query: 221 KFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCINFI 538 K+ET SYLP + E + ++I YLI GW P +E H P YW MWKLPM+G V+ E+ + +P VR++G+DN Q Q F+ Sbjct: 12 KYETFSYLPAMGPEKMRRQIAYLINQGWNPGIE------------HVEPERASTYYWYMWKLPMFGEQSVDTVIMELEACHRAHPGHHVRLVGYDNYSQSQGSAFV 105
BLAST of EY665254 vs. ExPASy Swiss-Prot
Match: RBS_SYNPX (Ribulose bisphosphate carboxylase small chain OS=Synechococcus sp. (strain WH8102) GN=cbbS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.803e-11 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 2 Query: 227 ETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCINFI 538 ET +LPP++ + + +I Y+I GW P +E H P YW+ WKLP +G D V+ E+ + YP VRI+G+D Q Q F+ Sbjct: 17 ETFGFLPPMTQDEIYDQIAYIIAQGWSPLVE------------HVHPSNSMATYWSYWKLPFFGEKDLNVVVSELEACHRAYPDHHVRIVGYDAYTQSQGACFV 108
BLAST of EY665254 vs. ExPASy Swiss-Prot
Match: RBS_SYNPW (Ribulose bisphosphate carboxylase small chain OS=Synechococcus sp. (strain WH7803) GN=cbbS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.803e-11 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 2 Query: 227 ETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCINFI 538 ET +LPP++ + + +I Y+I GW P +E H P YW+ WKLP +G D V+ E+ + YP VRI+G+D Q Q F+ Sbjct: 17 ETFGFLPPMTQDEIYDQIAYIIAQGWSPLVE------------HVHPSNSMATYWSYWKLPFFGEKDLNVVVSELEACHRAYPDHHVRIVGYDAYTQSQGACFV 108
BLAST of EY665254 vs. ExPASy Swiss-Prot
Match: RBS_HALNC (Ribulose bisphosphate carboxylase small chain OS=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) GN=cbbS PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.803e-11 Identity = 35/106 (33.02%), Postives = 53/106 (50.00%), Query Frame = 2 Query: 221 KFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCINFI 538 K+ET SYLPP++ E + +I Y I GW P +E K + +YW MWKLP +G + VL E+ + YP V+++ +DN Q + F+ Sbjct: 12 KYETFSYLPPMNAERIRAQIKYAIAQGWSPGIEHVEVKNSM------------NQYWYMWKLPFFGEQNVDNVLAEIEACRSAYPTHQVKLVAYDNYAQSLGLAFV 105
BLAST of EY665254 vs. ExPASy Swiss-Prot
Match: RBS_GUITH (Ribulose bisphosphate carboxylase small chain OS=Guillardia theta GN=rbcS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.886e-11 Identity = 35/107 (32.71%), Postives = 56/107 (52.34%), Query Frame = 2 Query: 236 SYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQ--CINFIAAKP 550 S+LP L+DE ++K+I Y I W +E W H ++ YW +W LP++G D V+ E+ +K P +V++ FDN R V+ C++FI +P Sbjct: 9 SFLPDLTDEQIVKQIQYAISKNWALNVE------WTDDPHPRNA------YWDLWGLPLFGIKDPAAVMFEINACRKAKPACYVKVNAFDNSRGVESCCLSFIVQRP 103 The following BLAST results are available for this feature:
BLAST of EY665254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 128
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY665254 ID=EY665254; Name=EY665254; organism=Citrus sinensis; type=EST; length=1011bpback to top |