EY665254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665254 vs. ExPASy Swiss-Prot
Match: RBSB_SOLTU (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Solanum tuberosum GN=RBCS-2B PE=3 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.488e-74 Identity = 131/180 (72.78%), Postives = 157/180 (87.22%), Query Frame = 2 Query: 17 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCINFIAAKPPG 556 ASS++SSA VAT RA+ AQASMV PFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YL+++GW+PCLEFE E G+VYRE++KSPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RIIGFDN RQVQCI+FIA KP G Sbjct: 2 ASSIVSSAAVAT--RANGAQASMVGPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY665254 vs. ExPASy Swiss-Prot
Match: RBS2_PETHY (Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.488e-74 Identity = 132/180 (73.33%), Postives = 155/180 (86.11%), Query Frame = 2 Query: 17 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCINFIAAKPPG 556 ASS++SSA VAT+ A AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP G KK+ETLSYLP L+DE LLKEI YL+ GW+PCLEFE E G+VYRE+H SP YYDGRYWTMWKLPM+GCTDATQVL E+ E +K YP++++RIIGFDN RQVQCI+FIA KPPG Sbjct: 2 ASSVMSSAAVATSTNA--AQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKPPG 179
BLAST of EY665254 vs. ExPASy Swiss-Prot
Match: RBS1_SOLLC (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum lycopersicum GN=RBCS-1 PE=2 SV=2) HSP 1 Score: 280.026 bits (715), Expect = 1.488e-74 Identity = 132/181 (72.93%), Postives = 158/181 (87.29%), Query Frame = 2 Query: 17 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNN-DITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCINFIAAKPPG 556 ASS++SSA AT R+++AQASMVAPFTGLKS+++FP TKK NN DITS+ASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LL EI YL+++GW+PCLEFE E+G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP ++VRIIGFDN RQVQCI+FIA KP G Sbjct: 2 ASSIVSSAAAAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETERGFVYRENNSSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of EY665254 vs. ExPASy Swiss-Prot
Match: RBS1B_ARATH (Ribulose bisphosphate carboxylase small chain 1B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1B PE=1 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.488e-74 Identity = 132/179 (73.74%), Postives = 152/179 (84.92%), Query Frame = 2 Query: 17 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCINFIAAKPP 553 ASSM+SSA V T S AQA+MVAPFTGLKSS++FP T+K NNDITSI SNGGRV CMKVWPP G KKFETLSYLP L+D L KE++YL+R+ WIPC+EFELE G+VYREH +PGYYDGRYWTMWKLP++GCTD+ QVLKEV E +KEYP +F+RIIGFDN RQVQCI+FIA KPP Sbjct: 2 ASSMLSSAAVVT----SPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176
BLAST of EY665254 vs. ExPASy Swiss-Prot
Match: RBS2_BRANA (Ribulose bisphosphate carboxylase small chain F1, chloroplastic OS=Brassica napus GN=RBCS F1 PE=3 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.943e-74 Identity = 132/179 (73.74%), Postives = 153/179 (85.47%), Query Frame = 2 Query: 17 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCINFIAAKPP 553 ASSM+SSA V T S AQA+MVAPFTGLKSS+AFP T+K NNDITSIASNGGRV CMKVWPP G KKFETLSYLP L++ L KE++YL+R+ WIPC+EFELE G+VYREH +PGYYDGRYWTMWKLP++GCTD+ QVLKEV E + EYP++F+RIIGFDN RQVQCI+FIA KPP Sbjct: 2 ASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWPPVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPP 176
BLAST of EY665254 vs. ExPASy Swiss-Prot
Match: RBS_CUCSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Cucumis sativus GN=RBCS PE=2 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 2.538e-74 Identity = 124/178 (69.66%), Postives = 157/178 (88.20%), Query Frame = 2 Query: 17 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCINFIAAKP 550 ASS++SSA VA+ N AS AQASMVAPFTGLKSS+ FP T+K N DIT++ASN G+VQCMKVWPP GL+KFETLSYLP +S+E L KE +YL+R+GW+PC+EF++ G+VYRE+H+SPG+YDGRYWTMWKLPM+GCTD++QV++E+ E +KEYP +F+R+IGFDN RQVQCI+FIA KP Sbjct: 2 ASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCMKVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGFYDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKP 179
BLAST of EY665254 vs. ExPASy Swiss-Prot
Match: RBSC_SOLTU (Ribulose bisphosphate carboxylase small chain 2C, chloroplastic OS=Solanum tuberosum GN=RBCS-2C PE=3 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 2.538e-74 Identity = 131/180 (72.78%), Postives = 157/180 (87.22%), Query Frame = 2 Query: 17 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCINFIAAKPPG 556 ASS++SSA VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YL+++GW+PCLEFE E G+VYRE++KSPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RIIGFDN RQVQCI+FIA KP G Sbjct: 2 ASSVMSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY665254 vs. ExPASy Swiss-Prot
Match: RBSA_SOLTU (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum tuberosum GN=RBCS-2A PE=3 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 2.538e-74 Identity = 131/180 (72.78%), Postives = 157/180 (87.22%), Query Frame = 2 Query: 17 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCINFIAAKPPG 556 ASS++SSA VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YL+++GW+PCLEFE E G+VYRE++KSPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RIIGFDN RQVQCI+FIA KP G Sbjct: 2 ASSVMSSAAVAT--RGNGAQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY665254 vs. ExPASy Swiss-Prot
Match: RBS1_BRANA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Brassica napus GN=RBCS PE=2 SV=2) HSP 1 Score: 279.256 bits (713), Expect = 2.538e-74 Identity = 132/179 (73.74%), Postives = 152/179 (84.92%), Query Frame = 2 Query: 17 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCINFIAAKPP 553 ASSM+SSA V T S AQA+MVAPFTGLKSSSAFP T+K NNDITSI SNGGRV CMKVWPP G KKFETLSYLP L++ L KE++YL+R+ WIPC+EFELE G+VYREH +PGYYDGRYWTMWKLP++GCTD+ QVLKEV E + EYP++F+RIIGFDN RQVQCI+FIA KPP Sbjct: 2 ASSMLSSAAVVT----SPAQATMVAPFTGLKSSSAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPP 176
BLAST of EY665254 vs. ExPASy Swiss-Prot
Match: RBS2B_ARATH (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B PE=2 SV=2) HSP 1 Score: 278.87 bits (712), Expect = 3.314e-74 Identity = 132/179 (73.74%), Postives = 150/179 (83.80%), Query Frame = 2 Query: 17 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCINFIAAKPP 553 ASSM SS V T S AQA+MVAPFTGLKSS++FP T+K NNDITSI SNGGRV CMKVWPP G KKFETLSYLP LSD L KE++YL+R+ WIPC+EFELE G+VYREH +PGYYDGRYWTMWKLP++GCTD+ QVLKEV E +KEYP +F+RIIGFDN RQVQCI+FIA KPP Sbjct: 2 ASSMFSSTAVVT----SPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176 The following BLAST results are available for this feature:
BLAST of EY665254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 128
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665254 ID=EY665254; Name=EY665254; organism=Citrus sinensis; type=EST; length=1011bpback to top |