EY665252

Overview
NameEY665252
Unique NameEY665252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMP (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 9.477e-55
Identity = 105/165 (63.64%), Postives = 132/165 (80.00%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKK 601
            ER   + S+L + RII  G  ++D +++ +VAQLL+L+A DPHKDI IY+NSPGGSVTAG+AI+DTM+ I PDV T+C G+AASMGAFLLS GAKGKR +LPNSRIMIHQPLGGAQG   +I+I A E+L  K  LN  LA HT QSLEKIN++T+RDYF+SP++
Sbjct:   36 ERAFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPHKDIQIYINSPGGSVTAGLAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAKHTNQSLEKINEDTERDYFLSPEE 200          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNP6 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.238e-54
Identity = 105/167 (62.87%), Postives = 133/167 (79.64%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + RI+  G  VDD +A+ IVAQLL+L+A DP KDI +Y+NSPGGSVTAGMAI+DTM+ + PDV+T+C GLAASMGAFLLS GA+GKR +LP++RIMIHQPLGGAQG   DI+I A E+L+ K+ LN  LA HTGQ LEKI  +TDRD+F+SP++ K
Sbjct:   49 ERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAK 215          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNE7 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.238e-54
Identity = 105/167 (62.87%), Postives = 133/167 (79.64%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + RI+  G  VDD +A+ IVAQLL+L+A DP KDI +Y+NSPGGSVTAGMAI+DTM+ + PDV+T+C GLAASMGAFLLS GA+GKR +LP++RIMIHQPLGGAQG   DI+I A E+L+ K+ LN  LA HTGQ LEKI  +TDRD+F+SP++ K
Sbjct:   49 ERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAK 215          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_STAS1 (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=clpP PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 2.111e-54
Identity = 101/167 (60.48%), Postives = 134/167 (80.24%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + RII  G  +DD++AN IV+QLL+L A D  KDI +Y+NSPGGSVTAG AI+DT++HI+PDV T+C+G+AASMG+FLL+AGAKGKR++LPN+ +MIHQPLGGAQG  T+I+I+AN +L  +A LN  LA  TGQS+EKI Q+TDRD F+S ++ K
Sbjct:   15 ERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTRAKLNQILAERTGQSIEKIEQDTDRDNFLSAEEAK 181          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP4_PROM9 (ATP-dependent Clp protease proteolytic subunit 4 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP4 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 2.111e-54
Identity = 105/165 (63.64%), Postives = 130/165 (78.79%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKK 601
            ER   + S+L + RII  G  ++D +++ +VAQLL+L+A DP KDI IY+NSPGGSVTAGMAI+DTM+ I PDV T+C G+AASMGAFLLS GAKGKR +LPNSRIMIHQPLGGAQG   +I+I A E+L  K  LN  LA HTGQ LEKIN++T+RDYF+SP +
Sbjct:   42 ERAFDIYSRLLRERIIFLGSGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPGGSVTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSE 206          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNPX (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain WH8102) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.757e-54
Identity = 109/183 (59.56%), Postives = 137/183 (74.86%), Query Frame = 2
Query:   62 PVHAQGPPPANPMVQE-----RFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISP 595
            P+ A GP P   +V++     R   + S+L + RII  G  VDD +A+ +VAQ+L+L+A DP KDI IY+NSPGGSVTAG+AI+DTM+ + PDV T+C GLAASMGAFLLS G KGKR +LPN+RIMIHQPLGGAQG   DI+I A E+L  K  LNG +A HTGQ L+KI ++TDRDYF+SP
Sbjct:   19 PISAPGPLPT--VVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGCKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLMADHTGQPLDKIAEDTDRDYFLSP 199          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_GEOSM (ATP-dependent Clp protease proteolytic subunit OS=Geobacter sp. (strain M21) GN=clpP PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.703e-54
Identity = 105/167 (62.87%), Postives = 131/167 (78.44%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + RII  GG +DD++AN+++AQLL+L+A DP KDI +Y+NSPGG VTAGMAI+DTM++I+  VST+CVG AASMGAFLLS G KGKRYSL NSRIMIHQPLGG QG  TDI I A E+L  K  LN  LA HTGQS+EK+  +T+RDYF+S ++ K
Sbjct:   14 ERSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMIHQPLGGFQGQATDIHIHAKEILRMKDELNALLAEHTGQSVEKVAADTERDYFMSGEEAK 180          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_GEOBB (ATP-dependent Clp protease proteolytic subunit OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=clpP PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.703e-54
Identity = 105/167 (62.87%), Postives = 131/167 (78.44%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + RII  GG +DD++AN+++AQLL+L+A DP KDI +Y+NSPGG VTAGMAI+DTM++I+  VST+CVG AASMGAFLLS G KGKRYSL NSRIMIHQPLGG QG  TDI I A E+L  K  LN  LA HTGQS+EK+  +T+RDYF+S ++ K
Sbjct:   14 ERSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMIHQPLGGFQGQATDIHIHAKEILRMKDQLNALLAEHTGQSVEKVAADTERDYFMSGEEAK 180          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP2_MYXXA (ATP-dependent Clp protease proteolytic subunit 2 OS=Myxococcus xanthus GN=clpP2 PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.703e-54
Identity = 101/167 (60.48%), Postives = 133/167 (79.64%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   +IS+L + RI+  G  +DDD+AN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAG+AI+DTM++++  VST+CVG AASMGA LL AGAKGKRY+LP+SRIMIHQPLGG +G  TDI+I A E+L  KA LN  +  HTGQS+E++ ++TDRDYF+   + K
Sbjct:   17 ERSYDIISRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGASEAK 183          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_DESRM (ATP-dependent Clp protease proteolytic subunit OS=Desulfotomaculum reducens (strain MI-1) GN=clpP PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 6.143e-54
Identity = 102/168 (60.71%), Postives = 134/168 (79.76%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTKK 610
            ER   + S+L + RII  GG +DD +AN+++AQ L+L+A DP KDI +Y+NSPGG VTAG+AI+DTM++I+P VST+C+G AASMG+FLL+AGA GKRY+LP +RIMIHQPLGG QG  TDIDI A E+L  K  LN  LA+HTGQ LE+I ++T+RDYF+S ++ KK
Sbjct:   16 ERAYDIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPGGVVTAGLAIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAPGKRYALPMARIMIHQPLGGVQGQATDIDIHAKEILRMKDLLNDRLAHHTGQPLEQITRDTERDYFMSAEEAKK 183          
The following BLAST results are available for this feature:
BLAST of EY665252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP3_PROMP9.477e-5563.64ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP3_SYNP61.238e-5462.87ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP2_SYNE71.238e-5462.87ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_STAS12.111e-5460.48ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP4_PROM92.111e-5463.64ATP-dependent Clp protease proteolytic subunit 4 O... [more]
CLPP1_SYNPX2.757e-5459.56ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_GEOSM4.703e-5462.87ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_GEOBB4.703e-5462.87ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP2_MYXXA4.703e-5460.48ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_DESRM6.143e-5460.71ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-G07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665252 ID=EY665252; Name=EY665252; organism=Citrus sinensis; type=EST; length=973bp
CCACGCGTCCGGGATTTGGTCCATTAGGGATGATTTGCAAATCCCATCTT
CACCATACTTCCCTGTACATGCGCAAGGGCCACCACCTGCTAACCCGATG
GTGCAAGAGCGGTTTCAGAGTGTTATCAGTCAACTTTTCCAGCATAGAAT
AATTCGCTGTGGTGGAGCTGTTGATGATGACATGGCGAACATTATTGTAG
CTCAGCTTCTCTATCTTGATGCTATTGATCCTCACAAGGATATTGTTATC
TATGTCAATTCTCCAGGAGGATCAGTTACTGCCGGTATGGCCATATTTGA
CACTATGAAGCATATTCGACCTGATGTCTCCACTGTTTGTGTTGGATTAG
CAGCTAGTATGGGAGCTTTCCTGCTTAGTGCTGGGGCCAAAGGAAAAAGA
TACAGTTTGCCCAACTCAAGGATAATGATTCATCAGCCTCTTGGTGGTGC
ACAAGGTGGGCAAACCGACATAGATATTTCAGCTAATGAAATGCTGCATC
CCAAGGCAAACCTGAATGGGTACCTTGCCTACCACACTGGTCAAAGTCTG
GAAAAAATCAACCAGAATACTGACCGTGATTATTTTATAAGCCCAAAAAA
AACCAAAAAATTATGGGCTTATTGACGGGGTTTCCATGAATCCCCTTAAA
AGCCCCCCACCCGCTGCCCGCTGCGGCAAAGGGAAAGGAAAAGCCCAGGG
TGGGACCCACCCTGGGTATCTTTGGCATTAATGGAAGGGGAATTTGAAAA
ATTTAAATTAAACTTTTTTGTTTTGGCCTTTCCATTTTTTTTGTTTTGTT
AAAAAATTTGAAAATGTATAAAACAAAAAATGAAGAAAAAAAAAAAATTT
TTGGGTGCCCGTTTTTTTGAATTTAAAGCGCAAAAAAAAAAAAAATTTTA
AAAAAATAATAACAACATTTTGTGTGGGAAAAAAAAAAAAAAAAAAAAAG
AGGGGGGGGGGCGCGACCAAATT
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