EY665252

Overview
NameEY665252
Unique NameEY665252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_STRZJ (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pneumoniae (strain JJA) GN=clpP PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 5.394e-42
Identity = 86/168 (51.19%), Postives = 122/168 (72.62%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGG--QTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKT 604
            ER   + S+L + RII   G V+D+MAN ++AQLL+LDA D  KDI +YVN+PGGSV+AG+AI DTM  I+ DV T+ +G+AASMG  + S+GAKGKR+ LPN+  MIHQP+GG  GG  QTD+ I+A  +L  +  L   LA ++GQS+EK++ + +RD ++S ++T
Sbjct:   13 ERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQET 180
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_STRR6 (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=clpP PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 5.394e-42
Identity = 86/168 (51.19%), Postives = 122/168 (72.62%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGG--QTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKT 604
            ER   + S+L + RII   G V+D+MAN ++AQLL+LDA D  KDI +YVN+PGGSV+AG+AI DTM  I+ DV T+ +G+AASMG  + S+GAKGKR+ LPN+  MIHQP+GG  GG  QTD+ I+A  +L  +  L   LA ++GQS+EK++ + +RD ++S ++T
Sbjct:   13 ERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQET 180
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_STRPS (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pneumoniae (strain CGSP14) GN=clpP PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 5.394e-42
Identity = 86/168 (51.19%), Postives = 122/168 (72.62%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGG--QTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKT 604
            ER   + S+L + RII   G V+D+MAN ++AQLL+LDA D  KDI +YVN+PGGSV+AG+AI DTM  I+ DV T+ +G+AASMG  + S+GAKGKR+ LPN+  MIHQP+GG  GG  QTD+ I+A  +L  +  L   LA ++GQS+EK++ + +RD ++S ++T
Sbjct:   13 ERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQET 180
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_STRPN (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pneumoniae GN=clpP PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 5.394e-42
Identity = 86/168 (51.19%), Postives = 122/168 (72.62%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGG--QTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKT 604
            ER   + S+L + RII   G V+D+MAN ++AQLL+LDA D  KDI +YVN+PGGSV+AG+AI DTM  I+ DV T+ +G+AASMG  + S+GAKGKR+ LPN+  MIHQP+GG  GG  QTD+ I+A  +L  +  L   LA ++GQS+EK++ + +RD ++S ++T
Sbjct:   13 ERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQET 180
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_STRPJ (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=clpP PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 5.394e-42
Identity = 86/168 (51.19%), Postives = 122/168 (72.62%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGG--QTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKT 604
            ER   + S+L + RII   G V+D+MAN ++AQLL+LDA D  KDI +YVN+PGGSV+AG+AI DTM  I+ DV T+ +G+AASMG  + S+GAKGKR+ LPN+  MIHQP+GG  GG  QTD+ I+A  +L  +  L   LA ++GQS+EK++ + +RD ++S ++T
Sbjct:   13 ERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQET 180
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_STRPI (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=clpP PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 5.394e-42
Identity = 86/168 (51.19%), Postives = 122/168 (72.62%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGG--QTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKT 604
            ER   + S+L + RII   G V+D+MAN ++AQLL+LDA D  KDI +YVN+PGGSV+AG+AI DTM  I+ DV T+ +G+AASMG  + S+GAKGKR+ LPN+  MIHQP+GG  GG  QTD+ I+A  +L  +  L   LA ++GQS+EK++ + +RD ++S ++T
Sbjct:   13 ERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQET 180
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_STRP2 (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=clpP PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 5.394e-42
Identity = 86/168 (51.19%), Postives = 122/168 (72.62%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGG--QTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKT 604
            ER   + S+L + RII   G V+D+MAN ++AQLL+LDA D  KDI +YVN+PGGSV+AG+AI DTM  I+ DV T+ +G+AASMG  + S+GAKGKR+ LPN+  MIHQP+GG  GG  QTD+ I+A  +L  +  L   LA ++GQS+EK++ + +RD ++S ++T
Sbjct:   13 ERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQET 180
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_BRUSU (ATP-dependent Clp protease proteolytic subunit OS=Brucella suis GN=clpP PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 5.394e-42
Identity = 83/165 (50.30%), Postives = 119/165 (72.12%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKK 601
            ER   + S+L + RII   G V+D M+ ++ AQLL+L+A +P K+I +Y+NSPGG VT+GMAI+DTM+ IRP VST+C+G AASMG+ LL+AGA G RY+LPN+RIM+HQP GG QG  +DI+  A +++  K  LN     HTG+  + I +  DRD+F++ ++
Sbjct:   23 ERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEINMYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQE 187
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_BRUSI (ATP-dependent Clp protease proteolytic subunit OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=clpP PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 5.394e-42
Identity = 83/165 (50.30%), Postives = 119/165 (72.12%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKK 601
            ER   + S+L + RII   G V+D M+ ++ AQLL+L+A +P K+I +Y+NSPGG VT+GMAI+DTM+ IRP VST+C+G AASMG+ LL+AGA G RY+LPN+RIM+HQP GG QG  +DI+  A +++  K  LN     HTG+  + I +  DRD+F++ ++
Sbjct:   23 ERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEINMYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQE 187
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_BRUC2 (ATP-dependent Clp protease proteolytic subunit OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=clpP PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 5.394e-42
Identity = 83/165 (50.30%), Postives = 119/165 (72.12%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKK 601
            ER   + S+L + RII   G V+D M+ ++ AQLL+L+A +P K+I +Y+NSPGG VT+GMAI+DTM+ IRP VST+C+G AASMG+ LL+AGA G RY+LPN+RIM+HQP GG QG  +DI+  A +++  K  LN     HTG+  + I +  DRD+F++ ++
Sbjct:   23 ERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEINMYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQE 187
The following BLAST results are available for this feature:
BLAST of EY665252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_STRZJ5.394e-4251.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STRR65.394e-4251.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STRPS5.394e-4251.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STRPN5.394e-4251.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STRPJ5.394e-4251.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STRPI5.394e-4251.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STRP25.394e-4251.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BRUSU5.394e-4250.30ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BRUSI5.394e-4250.30ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BRUC25.394e-4250.30ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-G07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665252 ID=EY665252; Name=EY665252; organism=Citrus sinensis; type=EST; length=973bp
CCACGCGTCCGGGATTTGGTCCATTAGGGATGATTTGCAAATCCCATCTT
CACCATACTTCCCTGTACATGCGCAAGGGCCACCACCTGCTAACCCGATG
GTGCAAGAGCGGTTTCAGAGTGTTATCAGTCAACTTTTCCAGCATAGAAT
AATTCGCTGTGGTGGAGCTGTTGATGATGACATGGCGAACATTATTGTAG
CTCAGCTTCTCTATCTTGATGCTATTGATCCTCACAAGGATATTGTTATC
TATGTCAATTCTCCAGGAGGATCAGTTACTGCCGGTATGGCCATATTTGA
CACTATGAAGCATATTCGACCTGATGTCTCCACTGTTTGTGTTGGATTAG
CAGCTAGTATGGGAGCTTTCCTGCTTAGTGCTGGGGCCAAAGGAAAAAGA
TACAGTTTGCCCAACTCAAGGATAATGATTCATCAGCCTCTTGGTGGTGC
ACAAGGTGGGCAAACCGACATAGATATTTCAGCTAATGAAATGCTGCATC
CCAAGGCAAACCTGAATGGGTACCTTGCCTACCACACTGGTCAAAGTCTG
GAAAAAATCAACCAGAATACTGACCGTGATTATTTTATAAGCCCAAAAAA
AACCAAAAAATTATGGGCTTATTGACGGGGTTTCCATGAATCCCCTTAAA
AGCCCCCCACCCGCTGCCCGCTGCGGCAAAGGGAAAGGAAAAGCCCAGGG
TGGGACCCACCCTGGGTATCTTTGGCATTAATGGAAGGGGAATTTGAAAA
ATTTAAATTAAACTTTTTTGTTTTGGCCTTTCCATTTTTTTTGTTTTGTT
AAAAAATTTGAAAATGTATAAAACAAAAAATGAAGAAAAAAAAAAAATTT
TTGGGTGCCCGTTTTTTTGAATTTAAAGCGCAAAAAAAAAAAAAATTTTA
AAAAAATAATAACAACATTTTGTGTGGGAAAAAAAAAAAAAAAAAAAAAG
AGGGGGGGGGGCGCGACCAAATT
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