CV884212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RB11B_HUMAN (Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4) HSP 1 Score: 72.4034 bits (176), Expect = 3.472e-12 Identity = 44/123 (35.77%), Postives = 65/123 (52.85%), Query Frame = -2 Query: 468 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 827 TIGVE + I+ WDTAGQE++ + YY A++++D+ LTY+NV W ++L NI I+L GNK D+++ R V + F K NL + E SA + N E+ F Sbjct: 43 TIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RB11B_DISOM (Ras-related protein Rab-11B OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.472e-12 Identity = 44/123 (35.77%), Postives = 65/123 (52.85%), Query Frame = -2 Query: 468 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 827 TIGVE + I+ WDTAGQE++ + YY A++++D+ LTY+NV W ++L NI I+L GNK D+++ R V + F K NL + E SA + N E+ F Sbjct: 43 TIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RB11B_BOVIN (Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 3.472e-12 Identity = 44/123 (35.77%), Postives = 65/123 (52.85%), Query Frame = -2 Query: 468 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 827 TIGVE + I+ WDTAGQE++ + YY A++++D+ LTY+NV W ++L NI I+L GNK D+++ R V + F K NL + E SA + N E+ F Sbjct: 43 TIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB2_LYMST (Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.472e-12 Identity = 45/130 (34.62%), Postives = 73/130 (56.15%), Query Frame = -2 Query: 447 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVK-NRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 827 TIGVE + +I+ WDTAGQE F + YY A++++D+T R T+ ++ TW D + N+ I+L GNK D++ R+VK ++ F R+ L + E SAK+ N E+ F+ A+++ Sbjct: 38 TIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEI 167
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.472e-12 Identity = 43/130 (33.08%), Postives = 69/130 (53.08%), Query Frame = -2 Query: 447 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 827 TIGV+ + I+ WDTAGQE+F + YY Q I+++D T + ++ NV W ++ R CEN+ +L GNK D+ N +V + +F + + E SAK+ N E+ F+ +AR + Sbjct: 42 TIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDI 171
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB19_BOVIN (Ras-related protein Rab-19 OS=Bos taurus GN=RAB19 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.472e-12 Identity = 45/131 (34.35%), Postives = 71/131 (54.20%), Query Frame = -2 Query: 447 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVDV-KNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKL 827 TIGV+ + K++ WDTAGQE+F + YY AII +D+T R T+++VP W ++ + N+ I+L GNK D+ + R V + +K L E SAK + N ++ F+ +AR+L Sbjct: 49 TIGVDFTVRALEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKCDLWEKRHVLFEDACILAEKYGLLAVLETSAKESKNIDEVFVLMAREL 179
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB18_CAEEL (Ras-related protein Rab-18 OS=Caenorhabditis elegans GN=rab-18 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.472e-12 Identity = 42/143 (29.37%), Postives = 75/143 (52.45%), Query Frame = -2 Query: 408 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC--ENIPIVLCGNKVDVKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPA 827 TIGV+ + +++ WDTAGQE+F L YY Q I ++DVT+R +++ + W +++ C +NI ++ NK+D+ NR V ++ + F ++ + E SAK+ + F L K+ P+L + P+ Sbjct: 43 TIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDMPNRVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDLWDNDRPS 185
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.534e-12 Identity = 43/130 (33.08%), Postives = 70/130 (53.85%), Query Frame = -2 Query: 447 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 827 TIGV+ F ++ WDTAGQE+F + YY II++DVT + ++ NV W +++ R E + +L GNK D+ +++V V F N+ + E SAK + N E+ FL ++R++ Sbjct: 40 TIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 169
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RBL2A_HUMAN (Rab-like protein 2A OS=Homo sapiens GN=RABL2A PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.534e-12 Identity = 36/98 (36.73%), Postives = 53/98 (54.08%), Query Frame = -2 Query: 468 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPF 761 WDTAGQE+F + YY I++FD+ ++TY+N+ TW+ +L IP ++ NK+D N V K F +K +L Y +SA N K F Sbjct: 75 WDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREFRPEIPCIVVANKIDDIN--VTQKSFNFAKKFSLPLYFVSAADGTNVVKLF 170
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.534e-12 Identity = 47/148 (31.76%), Postives = 71/148 (47.97%), Query Frame = -2 Query: 393 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPE 827 TIGVE ++ WDTAGQE++ + YY A++ +D+T R T+ NV W R+L NI I+L GNK D+K+ + ++Q +K+ L + E SA N +K F + + H + ALA E Sbjct: 44 TIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDI-----YHIISKKALAAQE 186 The following BLAST results are available for this feature:
BLAST of CV884212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 226
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884212 ID=CV884212; Name=CV884212; organism=Citrus sinensis; type=EST; length=828bpback to top |