CV884212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB5A_DICDI (Ras-related protein Rab-5A OS=Dictyostelium discoideum GN=rab5A PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.010e-11 Identity = 43/134 (32.09%), Postives = 70/134 (52.24%), Query Frame = -2 Query: 435 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVDV--KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDP 827 TIG N ++F WDTAGQE++ L YY Q AI+++D+ + +++ W ++L R NI I L GNK+D+ K + A+ + + L + E SAK++ N + F+ +A+KL P Sbjct: 41 TIGAAFLAQTVCLNDTTVKFEIWDTAGQERYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALAGNKLDLAAKRKVETAEAQQYAEENGLLFMETSAKTSQNVNELFVEIAKKLPKTP 174
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.010e-11 Identity = 44/130 (33.85%), Postives = 74/130 (56.92%), Query Frame = -2 Query: 447 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQ-VKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 827 TIGVE + +I+ WDTAGQE F + YY A++++D+T R T+ ++ +W D + N+ I+L GNK D+++R+ VK ++ F R+ L + E SAK+ N E+ F+ A+++ Sbjct: 38 TIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RBL2A_PONAB (Rab-like protein 2A OS=Pongo abelii GN=RABL2A PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.319e-11 Identity = 36/98 (36.73%), Postives = 52/98 (53.06%), Query Frame = -2 Query: 468 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPF 761 WDTAGQE+F + YY I++FDV ++TYKN+ W+ +L IP ++ NK+D + V K F +K +L Y +SA N K F Sbjct: 75 WDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYKNLSAWYTELREFRPEIPCLVVANKIDA-DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLF 171
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RB18A_LYMST (Ras-related protein Rab-18A OS=Lymnaea stagnalis GN=RAB18A PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.319e-11 Identity = 44/136 (32.35%), Postives = 68/136 (50.00%), Query Frame = -2 Query: 429 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV--LCGNKVDVKNRQV-KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNL 827 TIGV+ K + WDTAGQE+F L YY Q I+++DV+++ ++ + W +L +V L GNK+D N +V K + + F RK ++ + E SAK+N + F L K+ P L Sbjct: 41 TIGVDFKVKTLTVEGNKTKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVSSKQSFNKLDAWLNELETFSTKHDMVKMLVGNKIDRANHEVTKDEGLKFARKHHMLFIEASAKTNDGVQCAFEELVEKIIQTPGL 176
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RABZ_DICDI (Ras-related protein RabZ OS=Dictyostelium discoideum GN=rabZ PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.319e-11 Identity = 40/116 (34.48%), Postives = 64/116 (55.17%), Query Frame = -2 Query: 447 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQV----KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 779 KI C+DTAGQEKF L YY ++ +D+ + T+ NV W ++ R+ N+PI++ NK D+ ++V AK+ F KN+ E+SAK + E+ F+ LA ++ Sbjct: 99 KISLKCYDTAGQEKFRALSQSYYRCADGIMLFYDIANQKTFDNVGRWLEEVHRLAGPNVPILIIANKCDLNEKRVVNFNNAKK--FADDKNIPIIEVSAKESLGVEEAFIKLASEI 212
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB9B_PONAB (Ras-related protein Rab-9B OS=Pongo abelii GN=RAB9B PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.319e-11 Identity = 43/134 (32.09%), Postives = 65/134 (48.51%), Query Frame = -2 Query: 447 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDVKNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKL 827 TIGVE D + + WDTAGQE+F LR +Y C ++ F V R +++N+ W ++ E+ P V+ GNKVD ++RQV ++ +N Y E SAK + N F R++ Sbjct: 39 TIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVDKEDRQVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAFEEAVRQV 172
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB9B_MOUSE (Ras-related protein Rab-9B OS=Mus musculus GN=Rab9b PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.319e-11 Identity = 43/134 (32.09%), Postives = 64/134 (47.76%), Query Frame = -2 Query: 447 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 827 TIGVE D + + WDTAGQE+F LR +Y C ++ F V R +++N+ W ++ ++ P V+ GNKVD ++RQV + Q N Y E SAK + N F R++ Sbjct: 39 TIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPDHFPFVVLGNKVDKEDRQVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAFEEAVRQV 172
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB9B_HUMAN (Ras-related protein Rab-9B OS=Homo sapiens GN=RAB9B PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.319e-11 Identity = 43/134 (32.09%), Postives = 65/134 (48.51%), Query Frame = -2 Query: 447 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDVKNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKL 827 TIGVE D + + WDTAGQE+F LR +Y C ++ F V R +++N+ W ++ E+ P V+ GNKVD ++RQV ++ +N Y E SAK + N F R++ Sbjct: 39 TIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQV 172
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB5C_PONAB (Ras-related protein Rab-5C OS=Pongo abelii GN=RAB5C PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.319e-11 Identity = 41/113 (36.28%), Postives = 63/113 (55.75%), Query Frame = -2 Query: 447 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDV-KNRQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 776 ++F WDTAGQE++ L YY Q AI+++D+T T+ W ++L R NI I L GNK D+ R V+ ++ + N L + E SAK+ N + F+ +A+KL Sbjct: 70 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB5C_MOUSE (Ras-related protein Rab-5C OS=Mus musculus GN=Rab5c PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.319e-11 Identity = 41/113 (36.28%), Postives = 63/113 (55.75%), Query Frame = -2 Query: 447 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDV-KNRQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 776 ++F WDTAGQE++ L YY Q AI+++D+T T+ W ++L R NI I L GNK D+ R V+ ++ + N L + E SAK+ N + F+ +A+KL Sbjct: 70 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182 The following BLAST results are available for this feature:
BLAST of CV884212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 226
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884212 ID=CV884212; Name=CV884212; organism=Citrus sinensis; type=EST; length=828bpback to top |