CV884212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: SEC4_CANAL (Ras-related protein SEC4 OS=Candida albicans GN=SEC4 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 44/127 (34.65%), Postives = 67/127 (52.76%), Query Frame = -2 Query: 456 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVK-NRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLA 827 TIG++ + +I+ WDTAGQE+F + YY ++++DVT +++NV W + + + E+ I L GNK D + NRQV +Q K N+ + E SAKSN N + F LA Sbjct: 46 TIGIDFKIRTIESKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELA 172
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 40/123 (32.52%), Postives = 66/123 (53.66%), Query Frame = -2 Query: 468 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 827 TIGVE + ++ WDTAGQE++ + YY A++++D+T +T++NV W ++L +NI I+L GNK D+++ R V + F ++N + E SA + N E F Sbjct: 46 TIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAF 168
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 48/153 (31.37%), Postives = 76/153 (49.67%), Query Frame = -2 Query: 381 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAP-PEVQID 827 TIGVE T I+ WDTAGQE++ + YY A++++D+ + TYK+V W +L + NI I+L GNK D+++ R+V + F K L + E SA + N E F + ++ H + P+ + P+ ID Sbjct: 45 TIGVEFATRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQI-----YHIMSRPSHSTGPQTTID 192
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB7_ARATH (Ras-related protein Rab7 OS=Arabidopsis thaliana GN=RAB7 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 41/135 (30.37%), Postives = 67/135 (49.63%), Query Frame = -2 Query: 453 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRD-LCRVCEN----IPIVLCGNKVDV---KNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLAR 827 TIG + + + + WDTAGQE+F L +Y C ++++DV +++++ WH + L R P +L GNKVD+ +R V K+ K N+ Y+E SAK +YN + FL + + Sbjct: 40 TIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPFILLGNKVDIDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITK 174
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 42/130 (32.31%), Postives = 67/130 (51.54%), Query Frame = -2 Query: 447 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 827 TIGV+ + I+ WDTAGQE+F + YY I+++DVT R +Y NV W +++ R EN+ +L GNK D+ ++V F + + E SAK+ N E+ F+ +A ++ Sbjct: 40 TIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 38/130 (29.23%), Postives = 69/130 (53.08%), Query Frame = -2 Query: 447 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 827 TIGV+ + I+ WDTAGQE+F + YY I+++DVT +++ NV W +++ R C+++ +L GNK D+ +++ + + + E SAKS+ N E+ F+ +A ++ Sbjct: 40 TIGVDFKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEI 169
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: CPAS2_DICDI (Circularly permutated Ras protein 2 OS=Dictyostelium discoideum GN=cpras2 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 32/111 (28.83%), Postives = 67/111 (60.36%), Query Frame = -2 Query: 441 DTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIP-IVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 758 DTAGQE++ +RD YY HG I+ + + +R +++N+ +++ LCR+ C++ +++ G K D+++++ +K+ + + R + E SAK+ +N F +++ AG Sbjct: 2853 DTAGQEEYSAMRDQYYRHGDAFILAYSINSRSSFQNLQSYYNQLCRIKDCDSYACVIVIGTKADLEDQRQVSKEDGLLYARSLGAAFIETSAKTGFNVHTAFAIVSKLSAG 2963
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RHN1_NICPL (Ras-related protein RHN1 OS=Nicotiana plumbaginifolia GN=RHN1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.013e-11 Identity = 44/143 (30.77%), Postives = 75/143 (52.45%), Query Frame = -2 Query: 408 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN-RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPA 827 TIG N ++F WDTAGQE++ L YY AII++D+T+ ++ W ++L + N+ + L GNK D+++ R+V A++ + ++N L + E SAK+ N F +A++L P ++PA Sbjct: 42 TIGAAFFSSTLAVNNATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMALAGNKADLEDRRKVTAEEARLYAEENGLFFMETSAKTAVNVNAIFYEIAKRL---PRAQPAQNPA 181
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RB27B_BOVIN (Ras-related protein Rab-27B OS=Bos taurus GN=RAB27B PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 5.013e-11 Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = -2 Query: 474 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL--CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEK 779 K+ WDTAGQE+F L ++ ++MFD+T++ ++ NV W L CEN IVL GNK D+ + R+V +Q K ++ Y+E SA + N EK Sbjct: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARDLAEKYSIPYFETSAATGQNVEK 172
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.013e-11 Identity = 39/130 (30.00%), Postives = 70/130 (53.85%), Query Frame = -2 Query: 447 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVK-NRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 827 TIG++ +I+ WDTAGQE+F + YY I+++D+T +++N+ W + + + +L GNK D++ RQV+ +Q R+ ++++E SAKS+ N ++ F LAR + Sbjct: 40 TIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDI 169 The following BLAST results are available for this feature:
BLAST of CV884212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 226
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884212 ID=CV884212; Name=CV884212; organism=Citrus sinensis; type=EST; length=828bpback to top |