CV884212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.013e-11 Identity = 39/130 (30.00%), Postives = 70/130 (53.85%), Query Frame = -2 Query: 447 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVK-NRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 827 TIG++ KI+ WDTAGQE+F + YY I+++D+T +++N+ W + + + +L GNK D++ R+V+ +Q R+ ++++E SAKS+ N ++ F LAR + Sbjct: 40 TIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: YPTV5_VOLCA (GTP-binding protein yptV5 OS=Volvox carteri GN=YPTV5 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.547e-11 Identity = 41/134 (30.60%), Postives = 64/134 (47.76%), Query Frame = -2 Query: 453 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV--KNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLAR 827 TIG + + + K+ WDTAGQE+F L +Y C +++FDV ++ ++ W + +N P V+ GNK+D NRQV K+ K ++ Y+E SAK + N E F + R Sbjct: 40 TIGADFLTKEIEVDDKKVTMQIWDTAGQERFQSLGSAFYRGADCCMLVFDVNNAKSFDDLDNWRDEFIIQAGPSDPDNFPFVVLGNKIDEVGVNRQVTEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITR 173
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.547e-11 Identity = 46/152 (30.26%), Postives = 75/152 (49.34%), Query Frame = -2 Query: 393 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQV--TFHRKKNLQYYEISAKSNYNFEKPFLYLA----RKLAGDPNLHFVESPALAPPE 827 TIGV+ + I+ WDTAGQE+F + YY I+++DVT + ++ NV W ++ R EN+ +L GNK D+ +++V V F + + + E SAK+ N E+ F+ +A ++A P P + P E Sbjct: 40 TIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPTKAGGPVVRPQE 191
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RBH1B_ARATH (Ras-related protein RABH1B OS=Arabidopsis thaliana GN=RABH1B PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.547e-11 Identity = 42/132 (31.82%), Postives = 67/132 (50.76%), Query Frame = -2 Query: 441 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVD-VKNRQVKAKQVTFH-RKKNLQYYEISAKSNYNFEKPFLYLARKLAG 827 TIG++ + +R WDTAGQE+F L Y A+I++DV +R ++ N W ++ ++ +VL GNK D V RQV ++ R+ N+ + E SAK+ +N + F +A L G Sbjct: 41 TIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPG 172
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RB27B_MOUSE (Ras-related protein Rab-27B OS=Mus musculus GN=Rab27b PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 6.547e-11 Identity = 39/106 (36.79%), Postives = 57/106 (53.77%), Query Frame = -2 Query: 474 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL--CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEK 779 K+ WDTAGQE+F L ++ ++MFD+T++ ++ NV W L CEN IVL GNK D+ + R+V +Q K + Y+E SA + N EK Sbjct: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEK 172
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.547e-11 Identity = 39/124 (31.45%), Postives = 63/124 (50.81%), Query Frame = -2 Query: 465 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFL 827 TIGVE ++ WDTAGQE++ + YY A++++D+T R T+ ++P W +L NI I+L GNK D+++++ + F +K+ L + E SA E FL Sbjct: 47 TIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFL 170
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 6.547e-11 Identity = 43/123 (34.96%), Postives = 62/123 (50.41%), Query Frame = -2 Query: 468 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 827 TIGVE + I+ WDTAGQE++ + YY A++++D+ LTY+NV W ++L NI I+L GNK D+++ R V + F K L + E SA N E F Sbjct: 43 TIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAF 165
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAS1_RHIRA (Ras-like protein 1 OS=Rhizomucor racemosus GN=RAS1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.547e-11 Identity = 35/108 (32.41%), Postives = 68/108 (62.96%), Query Frame = -2 Query: 447 DTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN--IPIVLCGNKVDVK-NRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 758 DTAGQE++ +R+ Y +G+ ++++ +T+RL+++ + T+++ +CRV + P+VL GNK D++ +RQV +++ K Q+ E SAK N ++ F + R + Sbjct: 64 DTAGQEEYSAMREQYMRNGEGFLLVYSITSRLSFEEITTFYQQICRVKDRDYFPMVLVGNKCDLEGDRQVSSQEGRDLAKNFGCQFIETSAKQRINVDEAFFEVVRDI 171
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB7_PRUAR (Ras-related protein Rab7 OS=Prunus armeniaca PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.547e-11 Identity = 37/113 (32.74%), Postives = 58/113 (51.33%), Query Frame = -2 Query: 453 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV---KNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLAR 761 WDTAGQE+F L +Y C ++++DV +++N+ W + EN P V+ GNK+DV +R V K+ K N+ Y+E SAK +N + F +A+ Sbjct: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQATPSDPENFPFVVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDDAFQCIAK 174
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.547e-11 Identity = 39/130 (30.00%), Postives = 70/130 (53.85%), Query Frame = -2 Query: 447 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVK-NRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 827 TIG++ KI+ WDTAGQE+F + YY I+++D+T +++N+ W + + + +L GNK D++ R+V+ +Q R+ ++++E SAKS+ N ++ F LAR + Sbjct: 40 TIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169 The following BLAST results are available for this feature:
BLAST of CV884212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 226
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884212 ID=CV884212; Name=CV884212; organism=Citrus sinensis; type=EST; length=828bpback to top |