CV884212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: GSP1_NEUCR (GTP-binding nuclear protein GSP1/Ran OS=Neurospora crassa GN=gsp-1 PE=2 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 2.365e-69 Identity = 125/174 (71.84%), Postives = 140/174 (80.46%), Query Frame = -2 Query: 306 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDEDDD 827 T+GVEVHPL F TN G+I+F WDTAGQEKFGGLRDGYYI+GQC IIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVDVK R+VKAK +TFHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G+ L FV +PALAPP +D A PLP+E+DD Sbjct: 39 TLGVEVHPLGFSTNFGQIQFDVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVDVKERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNNALEFVAAPALAPPTAVVDQELMEKYRAEMDEAAQMPLPNEEDD 212
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RANT_RAT (GTP-binding nuclear protein Ran, testis-specific isoform OS=Rattus norvegicus GN=Rasl2-9 PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 2.002e-68 Identity = 123/174 (70.69%), Postives = 138/174 (79.31%), Query Frame = -2 Query: 306 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDEDDD 827 T+GVEVH L F TN G I+F WDTAGQEKFGGLRDGYYI QCAIIMFDVT+R+TYKNVP+WH+DL RVCENIPIVLCGNKVD+K+ +VKAK + FHRKKNLQYY+ISAKSNYNFEKPF +LARKL GDPNL FV PALAPPEV +D + LPDE+DD Sbjct: 42 TLGVEVHTLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPSWHKDLVRVCENIPIVLCGNKVDIKDMKVKAKPILFHRKKNLQYYDISAKSNYNFEKPFFWLARKLIGDPNLEFVAMPALAPPEVVMDPALAAQYEHDLEVAQTTALPDEEDD 215
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RANT_MOUSE (GTP-binding nuclear protein Ran, testis-specific isoform OS=Mus musculus GN=Rasl2-9 PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.416e-68 Identity = 123/174 (70.69%), Postives = 138/174 (79.31%), Query Frame = -2 Query: 306 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDEDDD 827 T+GVEVH L F TN G I+F WDTAGQEKFGGLRDGYYI QCAIIMFDVT+R+TYKNVP+WH+DL RVCENIPIVLCGNKVDVK+ +VKAK + FHRKKNLQYY+ISA+SNYNFEKPF +LARKL GDPNL FV PALAPPEV +D + LPDE+DD Sbjct: 42 TLGVEVHTLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPSWHKDLVRVCENIPIVLCGNKVDVKDMKVKAKPILFHRKKNLQYYDISARSNYNFEKPFFWLARKLIGDPNLEFVAMPALAPPEVVMDPALAAQYEHDLEVAQTTALPDEEDD 215
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAN_DICDI (GTP-binding nuclear protein Ran OS=Dictyostelium discoideum GN=ranA PE=1 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 9.009e-61 Identity = 109/174 (62.64%), Postives = 130/174 (74.71%), Query Frame = -2 Query: 306 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDEDDD 827 T+GV VHPL F+TN GKI F WDTAGQEKFGGLRDGYYI G CAIIMFDVT+R++YKNVP WH DL RVCENIPIVLCGNKVDVK+R+VK Q+ FHR+ NL YY++SAKSNYNFEKPF++L KL G+ + V+ P L PE +D A+ PLP+++DD Sbjct: 38 TLGVSVHPLIFYTNFGKIHFNVWDTAGQEKFGGLRDGYYIQGNCAIIMFDVTSRISYKNVPNWHSDLTRVCENIPIVLCGNKVDVKDRKVKPSQIVFHRRYNLSYYDVSAKSNYNFEKPFVWLTSKLLGNKAVTLVQQPTLKLPETVLDSNLMSLYEKEVADAAALPLPEDNDD 211
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAN4_ARATH (GTP-binding nuclear protein Ran-4 OS=Arabidopsis thaliana GN=RAN4 PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.537e-60 Identity = 112/168 (66.67%), Postives = 130/168 (77.38%), Query Frame = -2 Query: 324 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDXXXXXXXXXXXXXXASQPL 827 T+GV+++PLDFFTN GKIRF CWDTAGQEK+ GL+D YYIHGQCAIIMFDVTAR TY N+ W+RDL RVC+NIPIVLCGNKVDV +RQ+K K V++HRKK LQYYE+SAK+N NFEKPFLYLAR++AGD L FVES PE QID +QPL Sbjct: 45 TLGVDIYPLDFFTNRGKIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRVCKNIPIVLCGNKVDVPSRQIKPKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRIAGDAKLSFVES-----PEAQIDNLDVESLQLLTVEAGTQPL 207
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAN_PLAFA (GTP-binding nuclear protein Ran OS=Plasmodium falciparum PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 8.433e-59 Identity = 107/149 (71.81%), Postives = 126/149 (84.56%), Query Frame = -2 Query: 381 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQID 827 T+GVEVHPL F TN GK +F WDTAGQEKFGGLRDGYYI CAIIMFDV++R+TYKNVP W+RD+ RVCE IP+VL GNKVDVK+RQVK++Q+ FHRK+NLQYY++SA+SNYNFEKPFL+LAR+L+ PNL FV A A PE QID Sbjct: 41 TLGVEVHPLKFQTNFGKTQFNVWDTAGQEKFGGLRDGYYIKSDCAIIMFDVSSRITYKNVPNWYRDITRVCETIPMVLVGNKVDVKDRQVKSRQIQFHRKRNLQYYDLSARSNYNFEKPFLWLARRLSNQPNLVFVGEHAKA-PEFQID 188
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAN_TETPY (GTP-binding nuclear protein Ran OS=Tetrahymena pyriformis PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 4.788e-54 Identity = 103/180 (57.22%), Postives = 129/180 (71.67%), Query Frame = -2 Query: 300 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQI--DXXXXXXXXXXXXXXASQ--PLPDEDDDAF 827 T GV V + T G IRF WDTAGQEK GGLR+GYYI AI+MFDVT+R+TYKN+P WH+DL R+CEN+PIVL GNKVD K+ +VKA+Q+TFHRK++LQYY++SAKSNY +EKPFL++ RKL GDPNL+ VE ALAP ++ + D +Q LPDE+DD F Sbjct: 43 TQGVNVSNMILHTTKGAIRFNIWDTAGQEKLGGLREGYYIGADAAIMMFDVTSRITYKNIPKWHKDLTRICENVPIVLVGNKVDSKDSKVKARQITFHRKRSLQYYDVSAKSNYQYEKPFLWILRKLTGDPNLNLVEGIALAPVDIHMTEDQIKQLQMEHDEAMNLAQQGQLPDEEDDEF 222
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAN_TETTH (GTP-binding nuclear protein Ran OS=Tetrahymena thermophila PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.054e-53 Identity = 102/182 (56.04%), Postives = 128/182 (70.33%), Query Frame = -2 Query: 300 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQ----IDXXXXXXXXXXXXXXASQP--LPDEDDDAF 827 T GV V + +T G IRF WDTAGQEK GGLR+GYYI AI+MFDVT+R+TYKN+P WH+DL R+CENIPIVL GNKVD K+R+VKA+Q+TFHRK++LQYY++SAKSNY +EKPFL++ RKL GDP L+ VE AL P+ + D +Q LPD++DD F Sbjct: 43 TQGVNVSNMVLYTTKGPIRFNIWDTAGQEKLGGLREGYYIGANAAIMMFDVTSRITYKNIPKWHKDLTRICENIPIVLVGNKVDSKDRKVKARQITFHRKRSLQYYDVSAKSNYQYEKPFLWILRKLTGDPTLNLVEGIALVAPDTEHVMTEDQIKQLEMEQAEAMNLAQQGVLPDDEDDEF 224
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RANL_DROME (GTP-binding nuclear protein Ran-like OS=Drosophila melanogaster GN=ran-like PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.719e-49 Identity = 95/169 (56.21%), Postives = 114/169 (67.46%), Query Frame = -2 Query: 321 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDXXXXXXXXXXXXXXASQPLP 827 T+GVEV L F TN G R WDTAGQE++GGLRDGY++ QCAIIMFDV + TY NV WHRDL RVC NIPIV+CGNKVD+ +++ K V F RK N+ E+SAKSNYN EKPF+YL RKL GDP+L V+SPA+ PP+V S+PLP Sbjct: 42 TLGVEVEQLLFNTNRGVFRIDVWDTAGQERYGGLRDGYFVQSQCAIIMFDVASSNTYNNVKRWHRDLVRVCGNIPIVICGNKVDIMHKKTWKKGVDFDRKTNIYLIEMSAKSNYNVEKPFVYLLRKLVGDPSLQLVQSPAIQPPKVVFTDEMSRQVESLFNEAKSKPLP 210
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAN_GIALA (GTP-binding nuclear protein Ran OS=Giardia lamblia PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.683e-39 Identity = 81/189 (42.86%), Postives = 111/189 (58.73%), Query Frame = -2 Query: 312 TIGVEVHPLDFFT------NCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-----------IPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDED 827 TIGVE+ L F+ N ++ DTAGQEKFGGLRDGYY+ ++ FDVT R+TYKNV +W+RD+ R+C + IVL GNK DVK+R+++ + V FHR KN+ Y EISAK N+N+E P L + R L DP + F ++PAL P ++ +D + PLPD+D Sbjct: 38 TIGVEIRQLPFYVAGQSCPNGREVLLNVHDTAGQEKFGGLRDGYYVDSDACLLFFDVTNRVTYKNVESWYRDVFRICPTRRDASTGEEKPLAIVLVGNKCDVKDREIRTQTVKFHRSKNIPYVEISAKDNFNYELPILSILRTLLNDPTIQFSQAPALLPADIGMDAATREQINKDLEAVNNVPLPDDD 226 The following BLAST results are available for this feature:
BLAST of CV884212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 226
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884212 ID=CV884212; Name=CV884212; organism=Citrus sinensis; type=EST; length=828bpback to top |