CV884205

Overview
NameCV884205
Unique NameCV884205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV884205_ssr756 microsatellite CV884205_ssr756:756..767. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7277 contig Csv1_Contig7277:1..824. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 8.855e-30
Identity = 78/194 (40.21%), Postives = 109/194 (56.19%), Query Frame = -1
Query:  159 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLKGILG 722
            + DFCVA  DLK      G  C  P  V A DF FSGL + GNT + + + VT   V Q P +N +G+SL R+D A  G  P HTHP  SEIL++V G +  GF+SS+   N ++ K L  GD+ +FP G++HFQVN G   A+ F   +S N G+      +F +N  +  +L+ +   LD + VK L+   G
Sbjct:   28 LQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKFG 220          
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.157e-29
Identity = 74/190 (38.95%), Postives = 112/190 (58.95%), Query Frame = -1
Query:  171 VNDFCVADLKLSD--SPA--GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 722
            + DFCVA  +     SPA  G+PC P + V +DDF F+GL  AG+T +   A++ P  V  FPA+N LG+++ R+DLA GGV P+H+HP A+E++ V+ G +  GF+ S+A   Y K + +G+    P+GL+HFQ N G   A     FNS  PG+     ALF  +  +   ++ ++  +D   +K LK
Sbjct:   40 IQDFCVAVPRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFV-STAGKYYSKVVGEGETFAIPRGLMHFQYNPGNASARAMTVFNSQLPGVVPAATALFGADPEIPDAVLAKSFQVDAEIIKLLK 228          
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.510e-29
Identity = 78/194 (40.21%), Postives = 108/194 (55.67%), Query Frame = -1
Query:  159 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLKGILG 722
            + DFCVA  DLK      G  C  P  V A DF FSGL V GNT + + + VT   V Q P +N +G+SL R+D A  G  P HTHP  SEIL++V G +  GF+SS+   N ++ K L  GD+ +FP G++HFQ+N G   A+ F   +S N G+      +F +N  +  +L+ +   LD   VK L+   G
Sbjct:   28 LQDFCVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQLNIGKIPAIAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDANVVKELQAKFG 220          
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GL114_ARATH (Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.365e-29
Identity = 75/190 (39.47%), Postives = 106/190 (55.79%), Query Frame = -1
Query:  171 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 722
            + DFCVA  DLK      G  C  P    A+DF +SGL  AG T + + + VT   V Q P +N LG+SL R+D A  G  P HTHP A+EIL++V G +  GF+SS+   N ++ K L  GD+ +FP G++HFQVN G   A+ F   +S N G+      +F +   ++  ++ Q   LD   VK L+
Sbjct:   28 LQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLE 217          
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.395e-29
Identity = 70/175 (40.00%), Postives = 98/175 (56.00%), Query Frame = -1
Query:  216 VNDFCVADLKLSDS--PAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLV 722
            + DFCV   K +D     G  C  P  V  DDF+F GL +  NT + +  A T    A  P +N LG+S+ARLD A  G+ P HTHP A+E+ +V+ G    GF++S+     N ++ K L KGD+ +FPQGL+HFQ+N G    +G    +S NPG+     A+F     SQL+
Sbjct:   28 LQDFCVGVNKPNDGLFVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISVARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIHFQLNIGNYPGVGISGLSSQNPGVITIANAVFGPEHLSQLM 202          
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.395e-29
Identity = 67/161 (41.61%), Postives = 99/161 (61.49%), Query Frame = -1
Query:  243 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSG-ADGALGFVSFNSPNPGLQITDFALF 722
            + D CVAD        G+ C P + +TA DF F+G+G      + + +AVT A V +   +N LG+SLAR+D A GG+ P HTHP A+E++ V+ G +  GFI ++AN ++ KT+KKG++ +FP+GL+H+Q N+  A  A    +FNS  PG Q     LF
Sbjct:   27 LQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFI-TTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLF 186          
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.740e-29
Identity = 74/190 (38.95%), Postives = 107/190 (56.32%), Query Frame = -1
Query:  171 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 722
            + DFCVA  DLK      G  C  P    A+DF FSGL  AG+T + + + VT   V Q P +N +G+SL R+D A  G  P HTHP A+EIL+++ G +  GF+SS+   N ++ K L  GD+ +FP G++HFQVN G   A+ F   +S N G+      +F +   ++  ++ Q   LD   VK L+
Sbjct:   28 LQDFCVAIDDLKNGVFVNGKFCKDPKQAKAEDFFFSGLNQAGSTNNKVRSNVTTVNVDQIPGLNTMGISLVRIDYAPYGQNPPHTHPRATEILVLIEGTLYVGFVSSNQDNNRLFAKVLYPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNIVKDLE 217          
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.791e-29
Identity = 66/161 (40.99%), Postives = 95/161 (59.01%), Query Frame = -1
Query:  240 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFA 722
            + D CVAD        G+PC     +T  DF F+G+       S + +AVT A V + P +N L +SLAR+D A GG+ P HTHP A+E++ V+ G +  GFI ++AN ++ KT+K G++ +FP+GL+HFQ N+G   A    +FNS  PG       LFA
Sbjct:   28 LQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFI-TTANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFA 187          
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.181e-28
Identity = 72/167 (43.11%), Postives = 100/167 (59.88%), Query Frame = -1
Query:  234 VNDFCVADLK-LSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 722
            + DFCVADL   + S  G+PC P +    DDF+FS  L  AGNT++   +AVT   VA++P  N LG+S+ R+D A GG  P H HP A+EI +V+ G +  G + S  S N +Y + ++ G+  + P+GL+HFQ N G   A   VSFNS NPG+      LF +N
Sbjct:   29 LQDFCVADLDGKAVSVNGHPCKPMSEA-GDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSN 194          
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GL34_ARATH (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.720e-28
Identity = 59/136 (43.38%), Postives = 89/136 (65.44%), Query Frame = -1
Query:  267 GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGL 674
            GYPC  P  +TA DF  + L  AG+T + + + VT     +FP +N LGLS++R DL + G +P H+HP +SE+L VV G + AGF+ ++ N ++   L+KGD+ +FP+GLLHF ++ G + A  F  +NS NPG+
Sbjct:   41 GYPCKNPTKITAQDFKSTKLTEAGDTDNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVVFAGFVDTN-NKIFQTVLQKGDVFVFPKGLLHFCLSGGFEPATAFSFYNSQNPGV 175          
The following BLAST results are available for this feature:
BLAST of CV884205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL118_ARATH8.855e-3040.21Germin-like protein subfamily 1 member 18 OS=Arabi... [more]
GL37_ORYSJ1.157e-2938.95Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GL116_ARATH1.510e-2940.21Germin-like protein subfamily 1 member 16 OS=Arabi... [more]
GL114_ARATH3.365e-2939.47Germin-like protein subfamily 1 member 14 OS=Arabi... [more]
GLP1_MESCR4.395e-2940.00Germin-like protein OS=Mesembryanthemum crystallin... [more]
GL24_ARATH4.395e-2941.61Germin-like protein subfamily 2 member 4 OS=Arabid... [more]
GL113_ARATH5.740e-2938.95Germin-like protein subfamily 1 member 13 OS=Arabi... [more]
GL22_ARATH9.791e-2940.99Germin-like protein subfamily 2 member 2 OS=Arabid... [more]
OXO2_HORVU2.181e-2843.11Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
GL34_ARATH3.720e-2843.38Germin-like protein subfamily 3 member 4 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002A01_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T7_A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884205 ID=CV884205; Name=CV884205; organism=Citrus sinensis; type=EST; length=869bp
GAGAATTTTATTTATTCAGAAGAAAAGATAGGGGAAGTGAGAACAGAGAA
AATACTAACTCGTGAATTCCAACAATCAAATACATTAGCAACTAAATGAA
ATTAAGAACTCAAAACTACAAATGAAGAATGTGGTAACTAATAAGCCTAG
CCGGTGCCACCAAGGATACCCTTGAGCCTCTTCACCGTAGCATCGTCAAG
GAAAGTGGTCTGCTCCACCAATTGGGAAGACAAGTTGTTGGCAAATAAGG
CGAAATCGGTGATTTGGAGTCCAGGATTCGGGCTGTTGAAGCTAACAAAA
CCGAGGGCTCCGTCCGCGCCGGAATTTACTTGAAAATGCAACAACCCTTG
TGGAAAGATCATGATATCTCCCTTCTTAAGCGTCTTTACGTAAACAGTGT
TAGCTGAAGAGGAAATGAACCCGGCAGTTATGCAGCCATGCACAACAAGA
AGGATTTCGGAAGCAGCTGGATGAGTGTGCATTGGGATTACGCCACCCTT
TGCAAGATCTAGGCGTGCCAAGGAGAGTCCGAGGCCATTCACGGCCGGAA
ATTGAGCTACAAATGCAGGTGTCACTGCCGCGTTGATAATACTCGTGGTG
TTTCCGGCCACGCCGAGGCCCGAAAATACGAAGTCGTCAGCGGTAACCAT
AGCAGGGGGCACGCAAGGATAGCCGGCGGGACTATCCGACAGCTTTAGGT
CAGCGACGCAGAAGTCGTTAACCATAGCATTGGAGGAAGAGGATACGAAA
GCAAGGAAGAAGAAGAAGAGAATGTGAAGCATTTTGACTAATATTTATTT
TTTTTTTTTTTTTTTATTGGGAATATAAAATTTCATAAGCCAAAGTATAT
AATGATATGTTATTCAAAA
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