CV884205

Overview
NameCV884205
Unique NameCV884205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.041e-26
Identity = 71/195 (36.41%), Postives = 106/195 (54.36%), Query Frame = -1
Query:  156 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLKGILGG 722
            + DFCVADL    +  G+ C  PA    D+F+FS  +   G+  +  N + VT   VA++P VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I +    N  Y K ++ G+  + P+GL+HFQ N G   A   VSFNS NPG+      LF +N  + + ++ +   +D   V+ LK    G
Sbjct:   34 LQDFCVADLDSKVTVNGHAC-KPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDMGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDTGVVELLKSKFTG 227          
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.482e-26
Identity = 64/164 (39.02%), Postives = 97/164 (59.15%), Query Frame = -1
Query:  237 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD-GALGFVSFNSPNPGLQITDFALFAN 722
            + DFCVAD+K      G+PC  P  V +DDF  +    +  +T + + + VT   V  FP +N LG+SLAR+D A  GV P H HP A+E+L V+ G +  GF++S+ N ++ K + KGD  +FP+ ++HFQ+N   +  A+   S NS NPG+     A+F +
Sbjct:   29 LQDFCVADMKSPVRVNGFPCKNPMEVNSDDFFNAAKFDMPRSTMNKVGSNVTNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRATELLTVLEGTLYVGFVTSNPNRLFSKVVHKGDTFVFPKAMIHFQMNLDHNKPAVAQSSLNSQNPGVITIASAVFGS 192          
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GL88_ORYSJ (Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.548e-26
Identity = 68/188 (36.17%), Postives = 106/188 (56.38%), Query Frame = -1
Query:  171 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 722
            + DFCVAD        G+ C+ P  VTAD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP+GL+HFQ N      A+   + +S NPG      A+F +   +S +++ +   ++  T+  L+
Sbjct:   28 LQDFCVADKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDKVLAKAFQVEKGTIDWLQ 215          
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GL85_ORYSJ (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.758e-26
Identity = 68/188 (36.17%), Postives = 105/188 (55.85%), Query Frame = -1
Query:  171 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 722
            + DFCVAD+       G+ C+ P  V AD F  +        T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FPQGL+HFQ N      A+   + +S NPG      A+F +   +S +++ +   ++  T+  L+
Sbjct:   28 LQDFCVADMHSPVRVNGFACLNPMEVNADHFFKAAKLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPQGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVLAKAFQVEKGTIDWLQ 215          
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GL19_ARATH (Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.758e-26
Identity = 67/166 (40.36%), Postives = 92/166 (55.42%), Query Frame = -1
Query:  234 VNDFCVADLKLSDSPA--GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSS-ANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 722
            + DFCV     +D     G  C  P +VT +DF F+GL  A        + VT   V   P +N LG+SL R+D    G  P HTHP ASE+L V  G +  GF++S+  N ++ KTL +GD+ +FPQGL+HFQVN G   A+ F   +S NPG+      +F +N
Sbjct:   28 LQDFCVGVNTPADGVFVNGKFCKDPKLVTVEDFFFTGLHEARPPNPKTGSNVTAVNVNNLPGLNTLGISLVRIDYGVYGQNPPHTHPRASEVLYVAVGTLFVGFVTSNPENRLFSKTLYEGDVFVFPQGLIHFQVNVGKYPAVAFAGLSSQNPGVITIADTVFGSN 193          
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GL810_ORYSJ (Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.013e-25
Identity = 64/164 (39.02%), Postives = 94/164 (57.32%), Query Frame = -1
Query:  237 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFAN 722
            + DFCVAD+       G+ C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP+GL+HFQ N      A+   + +S NPG      A+F +
Sbjct:   28 LQDFCVADMHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGS 191          
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GL89_ORYSJ (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.323e-25
Identity = 65/164 (39.63%), Postives = 94/164 (57.32%), Query Frame = -1
Query:  237 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFAN 722
            + DFCVAD        G+ C+ P  VTAD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP GL+HFQ N      A+   + +S NPG+     A+F +
Sbjct:   28 LQDFCVADKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLHVGFVTSNPNNTLFSKVLNKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGVITIANAVFGS 191          
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.728e-25
Identity = 67/188 (35.64%), Postives = 104/188 (55.32%), Query Frame = -1
Query:  171 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 722
            + DFCVAD        G+ C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP+GL+HFQ N      A+   + +S NPG      A+F +   +S  ++ +   ++  T+  L+
Sbjct:   29 LQDFCVADKHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAALSSQNPGAITIANAVFGSKPPISDDILAKAFQVEKGTIDWLQ 216          
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GL86_ORYSJ (Germin-like protein 8-6 OS=Oryza sativa subsp. japonica GN=Os08g0189500 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.728e-25
Identity = 68/188 (36.17%), Postives = 105/188 (55.85%), Query Frame = -1
Query:  171 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 722
            + DFCVAD        G+ C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K LKKGD+ +FP GL+HFQ N      A+   + +S NPG      A+F +   +S +++ +   ++  T+  L+
Sbjct:   29 LQDFCVADEHSPVLVNGFACLDPKHVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLKKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVLAKAFQVEKGTIDWLQ 216          
BLAST of CV884205 vs. ExPASy Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.257e-25
Identity = 66/166 (39.76%), Postives = 95/166 (57.23%), Query Frame = -1
Query:  234 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFANN 722
            + DFCVADL       G+ C  P   +ADDF  +  L    +T + + + VT   V Q P +N LG+S+ARLD A  G+ P HTHP A+EI  V+ G +  GF++S+  N +  K L KGD+ +FP+GL+HFQ N      A+   + +S NPG+     A+F +N
Sbjct:   30 LQDFCVADLNSPVRVNGFVCKNPMNASADDFFKAAMLDKPRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNPDNRLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNPGVITIANAVFGSN 195          
The following BLAST results are available for this feature:
BLAST of CV884205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL34_ORYSJ2.041e-2636.41Putative germin-like protein 3-4 OS=Oryza sativa s... [more]
GL84_ORYSJ3.482e-2639.02Germin-like protein 8-4 OS=Oryza sativa subsp. jap... [more]
GL88_ORYSJ4.548e-2636.17Germin-like protein 8-8 OS=Oryza sativa subsp. jap... [more]
GL85_ORYSJ7.758e-2636.17Germin-like protein 8-5 OS=Oryza sativa subsp. jap... [more]
GL19_ARATH7.758e-2640.36Putative germin-like protein subfamily 1 member 9 ... [more]
GL810_ORYSJ1.013e-2539.02Germin-like protein 8-10 OS=Oryza sativa subsp. ja... [more]
GL89_ORYSJ1.323e-2539.63Germin-like protein 8-9 OS=Oryza sativa subsp. jap... [more]
GL87_ORYSJ1.728e-2535.64Germin-like protein 8-7 OS=Oryza sativa subsp. jap... [more]
GL86_ORYSJ1.728e-2536.17Germin-like protein 8-6 OS=Oryza sativa subsp. jap... [more]
GL82_ORYSJ2.257e-2539.76Germin-like protein 8-2 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002A01_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T7_A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884205 ID=CV884205; Name=CV884205; organism=Citrus sinensis; type=EST; length=869bp
GAGAATTTTATTTATTCAGAAGAAAAGATAGGGGAAGTGAGAACAGAGAA
AATACTAACTCGTGAATTCCAACAATCAAATACATTAGCAACTAAATGAA
ATTAAGAACTCAAAACTACAAATGAAGAATGTGGTAACTAATAAGCCTAG
CCGGTGCCACCAAGGATACCCTTGAGCCTCTTCACCGTAGCATCGTCAAG
GAAAGTGGTCTGCTCCACCAATTGGGAAGACAAGTTGTTGGCAAATAAGG
CGAAATCGGTGATTTGGAGTCCAGGATTCGGGCTGTTGAAGCTAACAAAA
CCGAGGGCTCCGTCCGCGCCGGAATTTACTTGAAAATGCAACAACCCTTG
TGGAAAGATCATGATATCTCCCTTCTTAAGCGTCTTTACGTAAACAGTGT
TAGCTGAAGAGGAAATGAACCCGGCAGTTATGCAGCCATGCACAACAAGA
AGGATTTCGGAAGCAGCTGGATGAGTGTGCATTGGGATTACGCCACCCTT
TGCAAGATCTAGGCGTGCCAAGGAGAGTCCGAGGCCATTCACGGCCGGAA
ATTGAGCTACAAATGCAGGTGTCACTGCCGCGTTGATAATACTCGTGGTG
TTTCCGGCCACGCCGAGGCCCGAAAATACGAAGTCGTCAGCGGTAACCAT
AGCAGGGGGCACGCAAGGATAGCCGGCGGGACTATCCGACAGCTTTAGGT
CAGCGACGCAGAAGTCGTTAACCATAGCATTGGAGGAAGAGGATACGAAA
GCAAGGAAGAAGAAGAAGAGAATGTGAAGCATTTTGACTAATATTTATTT
TTTTTTTTTTTTTTTATTGGGAATATAAAATTTCATAAGCCAAAGTATAT
AATGATATGTTATTCAAAA
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