EY665244

Overview
NameEY665244
Unique NameEY665244
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1136
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS_FRIAG (Plastocyanin, chloroplastic OS=Fritillaria agrestis GN=PETE PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.890e-28
Identity = 70/153 (45.75%), Postives = 91/153 (59.48%), Query Frame = 3
Query:   84 GLKAGATPARVVGSTMKASASAVPKLSIKATLKD-VGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVTRMEK-ALTFYTGPSPRSGLVGTMIV 536
            GLKAG  P     S    +  +    S+KA+ K+ +G                  +EVLLGG DGSLAFVPS+  V++GE +VFKNNAG+PHNV+FDEDE+P GV+   ISM  EDLLN PGET++VT  EK   + Y  P   +G+ G + V
Sbjct:   16 GLKAGRAPTTPSTSIKPPTPMS---FSVKASFKEAIGTALVATAAGAVLASNALAVEVLLGGSDGSLAFVPSNIEVAAGETVVFKNNAGFPHNVLFDEDEVPKGVDAGAISMKEEDLLNAPGETFSVTLKEKGTYSIYCSPHQGAGMAGKITV 165          
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS_VICFA (Plastocyanin OS=Vicia faba GN=PETE PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 5.499e-28
Identity = 63/98 (64.29%), Postives = 74/98 (75.51%), Query Frame = 3
Query:  246 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVTRMEK-ALTFYTGPSPRSGLVGTMIV 536
            +EVLLG  DG LAFVP+SF VS+G+ IVFKNNAG+PHNVVFDEDEIPSGV+ +KISM  EDLLN PGETY+V    K    FY  P   +G+VG + V
Sbjct:    1 VEVLLGASDGGLAFVPNSFEVSAGDTIVFKNNAGFPHNVVFDEDEIPSGVDAAKISMPEEDLLNAPGETYSVKLDAKGTYKFYCSPHQGAGMVGQVTV 98          
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS_GINBI (Plastocyanin OS=Ginkgo biloba GN=PETE PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 9.707e-25
Identity = 55/98 (56.12%), Postives = 71/98 (72.45%), Query Frame = 3
Query:  246 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVTRMEK-ALTFYTGPSPRSGLVGTMIV 536
            +EVL+GG  G LAF+P+   V++GE+IVFKNNAG+PHNV+FDED +P+GV+VS ISMS EDLLN PGETY V   +K    F+  P    G+ G + V
Sbjct:    1 VEVLMGGSGGELAFIPNELQVNAGEQIVFKNNAGFPHNVIFDEDAVPAGVDVSSISMSEEDLLNAPGETYVVKLDKKGTYRFFCAPHQGIGMSGIVTV 98          
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS_DAUCA (Plastocyanin OS=Daucus carota GN=PETE PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.391e-23
Identity = 57/97 (58.76%), Postives = 70/97 (72.16%), Query Frame = 3
Query:  249 EVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVTRMEK-ALTFYTGPSPRSGLVGTMIV 536
            EV LG DDG+L F PSSFSV+ GE I FKNNAG+PHN+VFDEDE+P+GV+VSKIS   ED L+G GE++ VT  EK    FY  P   +G+ G + V
Sbjct:    2 EVKLGADDGALVFSPSSFSVAKGEGISFKNNAGFPHNIVFDEDEVPAGVDVSKISQ--EDYLDGAGESFTVTLTEKGTYKFYCEPHAGAGMKGEVTV 96          
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS_PETCR (Plastocyanin A/B OS=Petroselinum crispum GN=PETE PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.078e-23
Identity = 56/97 (57.73%), Postives = 67/97 (69.07%), Query Frame = 3
Query:  249 EVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVTRMEK-ALTFYTGPSPRSGLVGTMIV 536
            EV LG DDG L F PSSF+V++GEKI FKNNAG+PHN+VFDEDE+P+GV   KIS    + LNG GETY VT  EK    FY  P   +G+ G + V
Sbjct:    2 EVKLGSDDGGLVFSPSSFTVAAGEKITFKNNAGFPHNIVFDEDEVPAGVNAEKISQ--PEYLNGAGETYEVTLTEKGTYKFYCEPHAGAGMKGEVTV 96          
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS_ORYSJ (Plastocyanin, chloroplastic OS=Oryza sativa subsp. japonica GN=PETE PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 5.889e-22
Identity = 55/97 (56.70%), Postives = 68/97 (70.10%), Query Frame = 3
Query:  249 EVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVT-RMEKALTFYTGPSPRSGLVGTMIV 536
            EVLLG + G L F P+ F+V SGE I FKNNAG+PHNVVFDED +PSGV+VSKIS   E+ LN PGET++VT  +     FY  P   +G+VG + V
Sbjct:   59 EVLLGANGGVLVFEPNDFTVKSGETITFKNNAGFPHNVVFDEDAVPSGVDVSKISQ--EEYLNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTV 153          
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS_ORYSI (Plastocyanin, chloroplastic OS=Oryza sativa subsp. indica GN=PETE PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 5.889e-22
Identity = 55/97 (56.70%), Postives = 68/97 (70.10%), Query Frame = 3
Query:  249 EVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVT-RMEKALTFYTGPSPRSGLVGTMIV 536
            EVLLG + G L F P+ F+V SGE I FKNNAG+PHNVVFDED +PSGV+VSKIS   E+ LN PGET++VT  +     FY  P   +G+VG + V
Sbjct:   59 EVLLGANGGVLVFEPNDFTVKSGETITFKNNAGFPHNVVFDEDAVPSGVDVSKISQ--EEYLNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTV 153          
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS_HORVU (Plastocyanin, chloroplastic OS=Hordeum vulgare GN=PETE PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.238e-21
Identity = 54/97 (55.67%), Postives = 67/97 (69.07%), Query Frame = 3
Query:  249 EVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVT-RMEKALTFYTGPSPRSGLVGTMIV 536
            +VLLG + G L F P+ FSV +GE I FKNNAGYPHNVVFDED +PSGV+VSKIS   E+ L  PGET++VT  +     FY  P   +G+VG + V
Sbjct:   60 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQ--EEYLTAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTV 154          
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS_PHYPA (Plastocyanin, chloroplastic OS=Physcomitrella patens GN=PETE PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 5.512e-20
Identity = 58/154 (37.66%), Postives = 81/154 (52.60%), Query Frame = 3
Query:   84 GLKAG--ATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVT-RMEKALTFYTGPSPRSGLVGTMIV 536
            GLKA   A PAR+  +++   A  V   +    LK VG                    V +GGDDG+L F P   SV++GE + F NN G+PHNVVFDED +P+GV+   I+   ED LNGP E++++T +      FY  P   +G+ G + V
Sbjct:   16 GLKAETKAAPARLSSTSVVRMAPVVRASASSDALKTVGKALLAASSSLLLVASANAATVKMGGDDGALGFYPKDISVAAGESVTFVNNKGFPHNVVFDEDAVPAGVKTEDINH--EDYLNGPNESFSITFKTPGTYEFYCEPHQGAGMKGVVTV 167          
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS_CHLRE (Plastocyanin, chloroplastic OS=Chlamydomonas reinhardtii GN=PETE PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.950e-18
Identity = 48/96 (50.00%), Postives = 61/96 (63.54%), Query Frame = 3
Query:  252 VLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVTRMEKA-LTFYTGPSPRSGLVGTMIV 536
            V LG D G+L FVP + ++ SGE + F NNAG+PHN+VFDED IPSGV    IS   +D LN PGETY+V         +Y  P   +G+VG +IV
Sbjct:   51 VKLGADSGALEFVPKTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISR--DDYLNAPGETYSVKLTAAGEYGYYCEPHQGAGMVGKIIV 144          
The following BLAST results are available for this feature:
BLAST of EY665244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
PLAS_FRIAG1.890e-2845.75Plastocyanin, chloroplastic OS=Fritillaria agresti... [more]
PLAS_VICFA5.499e-2864.29Plastocyanin OS=Vicia faba GN=PETE PE=1 SV=1[more]
PLAS_GINBI9.707e-2556.12Plastocyanin OS=Ginkgo biloba GN=PETE PE=1 SV=1[more]
PLAS_DAUCA2.391e-2358.76Plastocyanin OS=Daucus carota GN=PETE PE=1 SV=1[more]
PLAS_PETCR4.078e-2357.73Plastocyanin A/B OS=Petroselinum crispum GN=PETE P... [more]
PLAS_ORYSJ5.889e-2256.70Plastocyanin, chloroplastic OS=Oryza sativa subsp.... [more]
PLAS_ORYSI5.889e-2256.70Plastocyanin, chloroplastic OS=Oryza sativa subsp.... [more]
PLAS_HORVU2.238e-2155.67Plastocyanin, chloroplastic OS=Hordeum vulgare GN=... [more]
PLAS_PHYPA5.512e-2037.66Plastocyanin, chloroplastic OS=Physcomitrella pate... [more]
PLAS_CHLRE3.950e-1850.00Plastocyanin, chloroplastic OS=Chlamydomonas reinh... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-F10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665244 ID=EY665244; Name=EY665244; organism=Citrus sinensis; type=EST; length=1136bp
CAAAAAGAAAAAACAGCAGAACCCCATTTACAGTTACAATGGCTACTGTC
ACCTCTGCAGCTGTCACCGTCCCAACTTTCACCGGCCTTAAAGCCGGTGC
AACACCAGCCAGAGTTGTTGGTTCCACCATGAAGGCCTCAGCCTCTGCTG
TCCCAAAGCTCAGCATCAAGGCCACACTCAAAGATGTTGGAGTGGCCGTT
GCGGCCACAGCTGCCAGCGCAATGCTTGCTAGCAATGCCATGGCCATTGA
GGTTTTGCTTGGTGGTGATGATGGGTCCTTGGCTTTTGTTCCAAGCTCTT
TCTCTGTCAGCTCCGGTGAAAAGATTGTGTTCAAGAACAATGCTGGGTAC
CCACACAACGTTGTTTTCGATGAAGATGAGATTCCGAGTGGTGTTGAAGT
TTCAAAAATCTCCATGTCTATCGAAGACCTTCTCAATGGCCCTGGAGAAA
CTTATGCTGTTACTCGAATGGAAAAAGCACTTACTTTTTACACTGGTCCC
TCTCCAAGGAGTGGGCTGGTTGGGACAATGATTGTAATTAATTCCCTTTC
AAATTTGTTTGCCCCTCCACTTGGTTAAGATCCCTTCTTTTGGTTTTGAG
GATTTCTCTACTTTCAATTGGTGAGAAAAGGTTTGAGTGAAAAAAATAAC
ACAACCAAAAAACATTGTATTCCAATAATTTATAGCGAAATTCTAGTATT
TATAATTAACTCCGTGCCCTTTACTTTTTATAACAAAAATAATTTATCAA
TTCCATAAATATATGGGGTGTCTCTATCTTTCCTTTTATATCCATTAAGC
ATATATACTCATTTCGACACCTAATATTTTTACGCCCGCAATAACAAATA
GGCAAGCCCAGAAGCCAAATTACGGAACACCTTAATCTAATTGTTAAAGA
AATATACATACTGTACTATATTGAAAAAAACTATAAAATAAATATACAAT
TAGGAATAAATCTTTCAAATACAATTACATAAACATATTAAATGATAGAG
ATGTAAAATTACACGGTTCAGATGACTATGAACCCTGTAACTGAAAAAGT
TTATCAATCAAATAACAATTAACATTAGAATATAGAAATAGTATATTAAA
CATAAATCACGTGACTAGGATGATGCATATATAAGA
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