EY665243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_PYRCJ (50S ribosomal protein L10e OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.113e-26 Identity = 68/153 (44.44%), Postives = 88/153 (57.52%), Query Frame = 1 Query: 28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDE-FPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483 M RPARCYR+IK PY + + G P +I +D+G F LV+ E+ + +ALEAAR +KY+ KY G ++LR+ V P HVL N+ML+ AGADRLQ GMR AF P G ARV GQV+ V K + H +EAL Sbjct: 1 MPARPARCYRRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARAAFTMVAKLVAEERGQIRMQALEAARQISSKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVIFYVEFKPEHLAHVKEAL 153
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_PYRAR (50S ribosomal protein L10e OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl10e PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 4.229e-26 Identity = 65/149 (43.62%), Postives = 85/149 (57.05%), Query Frame = 1 Query: 37 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDE-FPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEA 480 RPARCYR+IK PY + + G P +I +D+G FP L+ E+ + +ALEAAR +KY+ KY G ++LR+ V P HVL N+ML+ AGADRLQ GMR AF P G ARV GQ+L K + H +EA Sbjct: 4 RPARCYRRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARATFPMVAKLIVEERGQIRMQALEAARQMASKYLTKYVGDANYYLRLNVIPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQILFYAEFKPEHLAHIKEA 152
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_THENV (50S ribosomal protein L10e OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl10e PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 7.214e-26 Identity = 65/150 (43.33%), Postives = 85/150 (56.67%), Query Frame = 1 Query: 37 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDE-FPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483 RPARCY++IK PY + + G P +I +D+G FP LV E+ + +ALEAAR KY++KY G ++LR+ P HVL N+ML+ AGADRLQ GMR AF P G ARV GQV+ K + H +EAL Sbjct: 4 RPARCYKRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARAAFPLVAKLVVQERGQIRMQALEAARQMAYKYLSKYVGDANYYLRLEAVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEAGQVIFYAEFKPEHVAHMKEAL 153
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_PYRAE (50S ribosomal protein L10e OS=Pyrobaculum aerophilum GN=rpl10e PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.230e-25 Identity = 66/150 (44.00%), Postives = 85/150 (56.67%), Query Frame = 1 Query: 37 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGV-DEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483 RPARCY++IK PY + + G P +I +D+G F LV E+ + +ALEAAR +KY+ KY G ++LR+ V P HVL N+ML+ AGADRLQ GMR AF P G ARV GQVL K + H +EAL Sbjct: 4 RPARCYKRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARTAFTMTAKLVVEERGQIRMQALEAARQMASKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVLFYAEFKPEHLPHIKEAL 153
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_META3 (50S ribosomal protein L10e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl10e PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 2.099e-25 Identity = 67/155 (43.23%), Postives = 89/155 (57.42%), Query Frame = 1 Query: 28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALSPC 492 M RP++CYR+I Y + ++ R VP PK+ Y G KG D FP VHLV + + ALE+ARI NKY G+ + ++RV+P VL NKM S AGADR+ GMR +F K GT ARV GQ ++++ N HA+EAL C Sbjct: 1 MALRPSKCYREINKPAYTRKKYIRAVPQPKVVHYVNG--NKGGD-FPVEVHLVVKDDIQIRHNALESARIVGNKYTQNKCGRLGYKFQIRVYPHQVLRENKMASGAGADRISDGMRLSFGKAVGTAARVRKGQKIITISTTPENVIHAKEALRRC 152
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_PYRIL (50S ribosomal protein L10e OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl10e PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.741e-25 Identity = 65/150 (43.33%), Postives = 86/150 (57.33%), Query Frame = 1 Query: 37 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDE-FPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483 RPARCYR+IK PY + + G P +I +D+G+ F LV E+ + +ALEAAR KY++KY G ++LR+ V P HVL N+ML+ AGADRLQ GMR AF P G ARV GQV+ + + H +EAL Sbjct: 4 RPARCYRRIKGPPYTREEYIHGAPMIQIPKFDMGVTSAAARAAFSMVAKLVVEERGQIRMQALEAARQMAYKYLSKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVIFYAEFRPEHIAHIKEAL 153
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_METJA (50S ribosomal protein L10e OS=Methanocaldococcus jannaschii GN=rpl10e PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.741e-25 Identity = 63/149 (42.28%), Postives = 87/149 (58.39%), Query Frame = 1 Query: 37 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483 RP RCYR + PY + + +GVP PK+ + +G EFP V+LV+ + ALEAAR+A NKY+ K G+ + ++RV+P +L +KM + AGADR+ GMR AF KP GT ARV GQ +L+V A+EAL Sbjct: 5 RPNRCYRDVDKPPYTRKEYVKGVPQPKVVHFIMGNLSA---EFPVKVNLVATRPIQIRHNALEAARVAANKYLTKMCGRMGYKFQIRVYPHQILREHKMATGAGADRISDGMRLAFGKPIGTAARVKEGQAILTVWVNPDKFPAAKEAL 150
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_ARCFU (50S ribosomal protein L10e OS=Archaeoglobus fulgidus GN=rpl10e PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.976e-25 Identity = 61/152 (40.13%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483 M R+PAR +R+++ +PY ++ + G P ++R++D+G K +FP + LV+ E + ALEAAR+ NKY+++ AG + L++R+ P H+L +KM AGADR+ GMR AF KP G ARV G ++SV K + A+EAL Sbjct: 1 MARKPARMWRRLE-RPYTRTEYIDGAPGTRVRMFDMGNKSA---DFPVMLTLVAKEAVQIRENALEAARVVANKYVSRRAGASNYKLKLRIFPHHILREHKMAVGAGADRISQGMRAAFGKPVGRAARVKPGTKIMSVWVKPEHFEIAKEAL 148
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_METMP (50S ribosomal protein L10e OS=Methanococcus maripaludis GN=rpl10e PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 8.818e-24 Identity = 62/155 (40.00%), Postives = 87/155 (56.13%), Query Frame = 1 Query: 28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALSPC 492 M RPARCYR I+ + Y + + R VP PK+ Y +G EFP V LVS + ALE++RIA NKY+ G+ + +RV+P +L NKM + AGADR+ GMR +F K GT A+V GQ ++++ + A+EAL C Sbjct: 1 MALRPARCYRTIERRSYTRKEYVRAVPQPKVVHYVMGNPSA---EFPVQVQLVSKSDILIRHNALESSRIAGNKYILSECGRTGYLFNIRVYPHEILRENKMAAGAGADRISDGMRLSFGKAVGTAAKVKKGQEIITIGVNPEKFYAAKEALRRC 152
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_THEVO (50S ribosomal protein L10e OS=Thermoplasma volcanium GN=rpl10e PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.566e-23 Identity = 62/152 (40.79%), Postives = 91/152 (59.87%), Query Frame = 1 Query: 28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483 M +PAR Y +I Y + F GVP PKI + G +K+ +FP + L++ E V ALEAAR++ N+ M + AG D F+L+V +P HVL +KM + AGADR+ +GMR AF +P GT ARV V++ R ++++H + AL Sbjct: 1 MVTKPARMYTRITGPAYTRKEFMGGVPYPKITTFVQGNQKR---DFPIEMQLIAMESCQVRHTALEAARVSVNRRMTEAAGLDNFYLKVVPYPHHVLREHKMATGAGADRISSGMRAAFGRPVGTAARVYQNDVIMIGRTDEAHAHELKIAL 149 The following BLAST results are available for this feature:
BLAST of EY665243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665243 ID=EY665243; Name=EY665243; organism=Citrus sinensis; type=EST; length=984bpback to top |