CV720153

Overview
NameCV720153
Unique NameCV720153
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5545 contig Csv1_Contig5545:52..781. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGO3_BOVIN (Protein argonaute-3 OS=Bos taurus GN=EIF2C3 PE=2 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 7.830e-47
Identity = 114/245 (46.53%), Postives = 147/245 (60.00%), Query Frame = 1
Query:   10 KINDQYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYKPIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADIPKFTVIVAQKNHHTKLFQASGPE------NVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIH 726
            K + Q L+N+ LKIN KLGGIN++L   Q    P +   P + LG DV+H   G    PS+AAVVGS      SRY A VR Q  + E+I  L           ++RELL+ FY++++  KP +II +RDGVSE QF QVL  EL  I +A   L +   P  T IV QK HHT+LF A   E      N+P GT VDT I HP  +DFY+C+HAG+ GTSRP+HYHVL D+  F+ D+LQ L +
Sbjct:  555 KTSPQTLSNLCLKINVKLGGINNILVPHQR---PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRYCATVRVQRPRQEIIQDLAS---------MVRELLIQFYKSTRF-KPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKDYQPGITYIVVQKRHHTRLFCADRTERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDNCFTADELQLLTY 785          
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGO7_ORYSJ (Protein argonaute 7 OS=Oryza sativa subsp. japonica GN=AGO7 PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.023e-46
Identity = 108/251 (43.03%), Postives = 144/251 (57.37%), Query Frame = 1
Query:    7 TKINDQYLTNVLLKINSKLGGINSLLALEQSSLIPLI--KDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYKPIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADIPKFTVIVAQKNHHTKLFQAS--------GPENVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIHS 729
            +K+  Q+LTN+ LKIN+KLGG N  L       IP I   + P M +G DV+H  P     PSV AVV S +WP  ++Y + +R+Q+ + E+I+ L         D +  ELL +F +    + P +II FRDGVSE+QF +VL  E+  +            P  T IV QK HHT+LF             +N+PPGTVVDT I HPR +DFY+C+H G  GTSRP HYHVL DE  F  D++Q LIH+
Sbjct:  745 SKLTSQFLTNLALKINAKLGGCNIALYSSFPCQIPRIFLSEEPVMFMGADVTHPHPLDDSSPSVVAVVASMNWPSANKYISRMRSQTHRKEIIEQL---------DVMAGELLEEFLK-EVGKLPSRIIFFRDGVSETQFYKVLKEEMHAVRTTCSRYPGYK-PLITFIVVQKRHHTRLFHRERNGSSSHYSDQNIPPGTVVDTVITHPREFDFYLCSHWGTKGTSRPTHYHVLWDENNFRSDEVQQLIHN 984          
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGO3_ORYSJ (Protein argonaute 3 OS=Oryza sativa subsp. japonica GN=AGO3 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.336e-46
Identity = 113/248 (45.56%), Postives = 146/248 (58.87%), Query Frame = 1
Query:   10 KINDQYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGR--SDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYKPIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADIPKFTVIVAQKNHHTKLFQASGPE------NVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIHS 729
            K  DQY+TN+ LKIN K+GG N  + L+  S IP++     M +G DV+H  PG    DIPS+AAVV S      S+Y   +R Q  + EMI  L          G I + L+  Y    ++KP  II FRDGVS+ QF+ VLN EL  +      +   D PK TVIVA+K HHT+LF     +      NV PGTVVDT +V P  YDFY+C+H G +GTSRP HY+ LLDE GF+ DDLQ L+++
Sbjct:  760 KRQDQYITNLALKINGKIGGSN--MQLDPDS-IPVVSAKDFMFIGADVNHPPPGNVSKDIPSIAAVVASVDKGA-SKYVTRIRAQYHRCEMIQNL----------GDICKELIGAYEKVNKKKPDSIIYFRDGVSDGQFDMVLNEELADM---ENKIMVGDYPKITVIVAKKRHHTRLFPKDRNQRQTKNGNVLPGTVVDTDVVDPTAYDFYLCSHKGEVGTSRPTHYYSLLDEHGFASDDLQKLVYN 990          
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGO2_ORYSJ (Protein argonaute 2 OS=Oryza sativa subsp. japonica GN=AGO2 PE=2 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.744e-46
Identity = 110/243 (45.27%), Postives = 147/243 (60.49%), Query Frame = 1
Query:   19 DQYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYKPIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADIPKFTVIVAQKNHHTKLF------QASGPENVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIHS 729
            DQY++N+ LKIN K+GG N  L  E    +P I   P M +G DV+H SPG  + PS+AAVV S      S+Y   +R Q  + E+I  L          G + + L+  +    + KP++II FRDGVS+ QF+ VLN EL  + KA +    +  P  TVIVA+K HHT+LF      Q +   NV PGTVVDT +V P  YDFY+C+H G+IGTSRP HY+ LLDE GF+ DDLQ L+++
Sbjct:  730 DQYMSNLALKINGKIGGSNIQLFGES---LPRISGAPYMFIGADVNHPSPGNVESPSIAAVVASVDQGA-SKYVPRIRAQPHRCEVIQHL----------GDMCKELIGVFEKRNRVKPQRIIYFRDGVSDGQFDMVLNEELADMEKAIKTKDYS--PTITVIVAKKRHHTRLFPKDLNQQQTKNGNVLPGTVVDTGVVDPAAYDFYLCSHNGLIGTSRPTHYYSLLDEHGFASDDLQKLVYN 956          
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGO2_XENTR (Protein argonaute-2 OS=Xenopus tropicalis GN=eif2c2 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.886e-46
Identity = 112/241 (46.47%), Postives = 147/241 (61.00%), Query Frame = 1
Query:   22 QYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYKPIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADIPKFTVIVAQKNHHTKLFQASGPE------NVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIH 726
            Q L+N+ LKIN KLGG+N++L L Q    P +   P + LG DV+H   G    PS+AAVVGS      +RY A VR Q  + E+I  L           ++RELL+ FY++++  KP +II +RDGVSE QF QVL+ EL  I +A   L +   P  T IV QK HHT+LF     E      N+P GT VDT+I HP  +DFY+C+HAG+ GTSRP+HYHVL D+  FS D+LQ L +
Sbjct:  570 QTLSNLCLKINVKLGGVNNIL-LPQGR--PPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDL---------SAMVRELLIQFYKSTRF-KPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDRNERVGKSGNIPAGTTVDTKITHPSEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTY 796          
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGO2_XENLA (Protein argonaute-2 OS=Xenopus laevis GN=eif2c2 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.886e-46
Identity = 112/241 (46.47%), Postives = 147/241 (61.00%), Query Frame = 1
Query:   22 QYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYKPIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADIPKFTVIVAQKNHHTKLFQASGPE------NVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIH 726
            Q L+N+ LKIN KLGG+N++L L Q    P +   P + LG DV+H   G    PS+AAVVGS      +RY A VR Q  + E+I  L           ++RELL+ FY++++  KP +II +RDGVSE QF QVL+ EL  I +A   L +   P  T IV QK HHT+LF     E      N+P GT VDT+I HP  +DFY+C+HAG+ GTSRP+HYHVL D+  FS D+LQ L +
Sbjct:  561 QTLSNLCLKINVKLGGVNNIL-LPQGR--PPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDL---------SAMVRELLIQFYKSTRF-KPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDRNERVGKSGNIPAGTTVDTKITHPSEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTY 787          
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGO2_RAT (Protein argonaute-2 OS=Rattus norvegicus GN=Eif2c2 PE=2 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 5.075e-46
Identity = 112/241 (46.47%), Postives = 147/241 (61.00%), Query Frame = 1
Query:   22 QYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYKPIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADIPKFTVIVAQKNHHTKLFQASGPE------NVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIH 726
            Q L+N+ LKIN KLGG+N++L L Q    P +   P + LG DV+H   G    PS+AAVVGS      +RY A VR Q  + E+I  L           ++RELL+ FY++++  KP +II +RDGVSE QF QVL+ EL  I +A   L +   P  T IV QK HHT+LF     E      N+P GT VDT+I HP  +DFY+C+HAG+ GTSRP+HYHVL D+  FS D+LQ L +
Sbjct:  559 QTLSNLCLKINVKLGGVNNIL-LPQGR--PPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDLA---------AMVRELLIQFYKSTRF-KPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKEYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTY 785          
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGO2_RABIT (Protein argonaute-2 (Fragment) OS=Oryctolagus cuniculus GN=EIF2C2 PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 6.628e-46
Identity = 112/241 (46.47%), Postives = 147/241 (61.00%), Query Frame = 1
Query:   22 QYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYKPIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADIPKFTVIVAQKNHHTKLFQASGPE------NVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIH 726
            Q L+N+ LKIN KLGG+N++L L Q    P +   P + LG DV+H   G    PS+AAVVGS      +RY A VR Q  + E+I  L           ++RELL+ FY++++  KP +II +RDGVSE QF QVL+ EL  I +A   L +   P  T IV QK HHT+LF     E      N+P GT VDT+I HP  +DFY+C+HAG+ GTSRP+HYHVL D+  FS D+LQ L +
Sbjct:  539 QTLSNLCLKINVKLGGVNNIL-LPQGR--PPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDLA---------AMVRELLIQFYKSTRF-KPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTY 765          
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGO2_MOUSE (Protein argonaute-2 OS=Mus musculus GN=Eif2c2 PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 6.628e-46
Identity = 112/241 (46.47%), Postives = 147/241 (61.00%), Query Frame = 1
Query:   22 QYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYKPIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADIPKFTVIVAQKNHHTKLFQASGPE------NVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIH 726
            Q L+N+ LKIN KLGG+N++L L Q    P +   P + LG DV+H   G    PS+AAVVGS      +RY A VR Q  + E+I  L           ++RELL+ FY++++  KP +II +RDGVSE QF QVL+ EL  I +A   L +   P  T IV QK HHT+LF     E      N+P GT VDT+I HP  +DFY+C+HAG+ GTSRP+HYHVL D+  FS D+LQ L +
Sbjct:  559 QTLSNLCLKINVKLGGVNNIL-LPQGR--PPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDLA---------AMVRELLIQFYKSTRF-KPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTY 785          
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGO2_HUMAN (Protein argonaute-2 OS=Homo sapiens GN=EIF2C2 PE=1 SV=3)

HSP 1 Score: 184.111 bits (466), Expect = 6.628e-46
Identity = 112/241 (46.47%), Postives = 147/241 (61.00%), Query Frame = 1
Query:   22 QYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYKPIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADIPKFTVIVAQKNHHTKLFQASGPE------NVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIH 726
            Q L+N+ LKIN KLGG+N++L L Q    P +   P + LG DV+H   G    PS+AAVVGS      +RY A VR Q  + E+I  L           ++RELL+ FY++++  KP +II +RDGVSE QF QVL+ EL  I +A   L +   P  T IV QK HHT+LF     E      N+P GT VDT+I HP  +DFY+C+HAG+ GTSRP+HYHVL D+  FS D+LQ L +
Sbjct:  558 QTLSNLCLKINVKLGGVNNIL-LPQGR--PPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDLA---------AMVRELLIQFYKSTRF-KPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTY 784          
The following BLAST results are available for this feature:
BLAST of CV720153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
AGO3_BOVIN7.830e-4746.53Protein argonaute-3 OS=Bos taurus GN=EIF2C3 PE=2 S... [more]
AGO7_ORYSJ1.023e-4643.03Protein argonaute 7 OS=Oryza sativa subsp. japonic... [more]
AGO3_ORYSJ1.336e-4645.56Protein argonaute 3 OS=Oryza sativa subsp. japonic... [more]
AGO2_ORYSJ1.744e-4645.27Protein argonaute 2 OS=Oryza sativa subsp. japonic... [more]
AGO2_XENTR3.886e-4646.47Protein argonaute-2 OS=Xenopus tropicalis GN=eif2c... [more]
AGO2_XENLA3.886e-4646.47Protein argonaute-2 OS=Xenopus laevis GN=eif2c2 PE... [more]
AGO2_RAT5.075e-4646.47Protein argonaute-2 OS=Rattus norvegicus GN=Eif2c2... [more]
AGO2_RABIT6.628e-4646.47Protein argonaute-2 (Fragment) OS=Oryctolagus cuni... [more]
AGO2_MOUSE6.628e-4646.47Protein argonaute-2 OS=Mus musculus GN=Eif2c2 PE=1... [more]
AGO2_HUMAN6.628e-4646.47Protein argonaute-2 OS=Homo sapiens GN=EIF2C2 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0012P18_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0012P18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV720153 ID=CV720153; Name=CV720153; organism=Citrus sinensis; type=EST; length=730bp
TCTCCTACTAAGATTAATGATCAGTATCTTACAAATGTATTACTTAAGAT
CAATTCTAAGCTTGGAGGAATAAATTCTTTATTGGCATTGGAGCAATCCT
CTCTCATCCCCCTGATAAAAGATACTCCTACAATGATTTTGGGTATGGAT
GTCTCTCATGGATCTCCTGGTCGATCAGATATTCCATCAGTTGCAGCAGT
TGTTGGCTCTCAATCTTGGCCTCTGATTTCAAGGTATAGGGCAGCTGTAA
GAACACAATCTTCGAAGGTAGAGATGATAGATGCTTTGTACAAGCCTATA
GCAAATGGGAATGATGATGGTATCATCAGGGAGCTGCTCTTGGACTTCTA
CCGAACAAGCAAGCAACGCAAACCCAAACAGATTATTATATTCAGGGATG
GAGTGAGTGAATCACAATTTAATCAGGTTTTGAACATTGAGCTGGAACAA
ATCATAAAGGCCTACCAGCATCTTGGCGAGGCTGACATTCCCAAGTTCAC
TGTTATAGTGGCTCAAAAGAACCACCACACCAAGCTATTCCAAGCCAGTG
GTCCAGAAAATGTTCCTCCTGGGACAGTTGTGGACACAAGGATTGTGCAT
CCAAGGAATTATGACTTCTACATGTGCGCCCATGCAGGGATGATCGGAAC
TTCGAGACCAGCTCACTACCATGTCTTGCTTGATGAGATTGGTTTCTCTC
CAGATGACCTGCAAAATCTTATCCACTCTC
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