EY665235

Overview
NameEY665235
Unique NameEY665235
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1063
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UB2D3_MACFA (Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.944e-29
Identity = 60/94 (63.83%), Postives = 71/94 (75.53%), Query Frame = 1 
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            MA KRI KEL DL +DPP  CSAGPV +DMFHWQATIMGP DSPY GGVF +TIHFP DYPFKPPKVAF T+++   +  + G+  L   ++QW
Sbjct:    1 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP-NINSNGSICLDILRSQW 93
[Close]
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UB2D3_HUMAN (Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.944e-29
Identity = 60/94 (63.83%), Postives = 71/94 (75.53%), Query Frame = 1 
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            MA KRI KEL DL +DPP  CSAGPV +DMFHWQATIMGP DSPY GGVF +TIHFP DYPFKPPKVAF T+++   +  + G+  L   ++QW
Sbjct:    1 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP-NINSNGSICLDILRSQW 93
[Close]
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UB2D2_XENLA (Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.944e-29
Identity = 60/94 (63.83%), Postives = 71/94 (75.53%), Query Frame = 1 
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            MA KRI KEL DL +DPP  CSAGPV +DMFHWQATIMGP DSPY GGVF +TIHFP DYPFKPPKVAF T+++   +  + G+  L   ++QW
Sbjct:    1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP-NINSNGSICLDILRSQW 93
[Close]
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UB2D2_RAT (Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.944e-29
Identity = 60/94 (63.83%), Postives = 71/94 (75.53%), Query Frame = 1 
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            MA KRI KEL DL +DPP  CSAGPV +DMFHWQATIMGP DSPY GGVF +TIHFP DYPFKPPKVAF T+++   +  + G+  L   ++QW
Sbjct:    1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP-NINSNGSICLDILRSQW 93
[Close]
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UB2D2_PIG (Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.944e-29
Identity = 60/94 (63.83%), Postives = 71/94 (75.53%), Query Frame = 1 
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            MA KRI KEL DL +DPP  CSAGPV +DMFHWQATIMGP DSPY GGVF +TIHFP DYPFKPPKVAF T+++   +  + G+  L   ++QW
Sbjct:    1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP-NINSNGSICLDILRSQW 93
[Close]
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UB2D2_MOUSE (Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.944e-29
Identity = 60/94 (63.83%), Postives = 71/94 (75.53%), Query Frame = 1 
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            MA KRI KEL DL +DPP  CSAGPV +DMFHWQATIMGP DSPY GGVF +TIHFP DYPFKPPKVAF T+++   +  + G+  L   ++QW
Sbjct:    1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP-NINSNGSICLDILRSQW 93
[Close]
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UB2D2_HUMAN (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.944e-29
Identity = 60/94 (63.83%), Postives = 71/94 (75.53%), Query Frame = 1 
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            MA KRI KEL DL +DPP  CSAGPV +DMFHWQATIMGP DSPY GGVF +TIHFP DYPFKPPKVAF T+++   +  + G+  L   ++QW
Sbjct:    1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP-NINSNGSICLDILRSQW 93
[Close]
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UB2D2_BOVIN (Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.944e-29
Identity = 60/94 (63.83%), Postives = 71/94 (75.53%), Query Frame = 1 
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            MA KRI KEL DL +DPP  CSAGPV +DMFHWQATIMGP DSPY GGVF +TIHFP DYPFKPPKVAF T+++   +  + G+  L   ++QW
Sbjct:    1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP-NINSNGSICLDILRSQW 93
[Close]
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 7.764e-29
Identity = 73/141 (51.77%), Postives = 94/141 (66.67%), Query Frame = 1 
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQWESCSYPFPKGLLTNPGSLFDGTKSRMDPFG*PKICSHVTKPTGNKYK 576
            MA KRI +EL DL KDPP+SCSAGPV +D+FHWQATIMGP DSPYAGGVF ++IHFP DYPFKPPKV F T+++   +  + G+  L   ++QW S +    K LL+    L D      DP   P+I +HV K   ++Y+
Sbjct:    1 MALKRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHP-NINSNGSICLDILRDQW-SPALTISKVLLSICSLLTDPNPD--DPLV-PEI-AHVYKTDRSRYE 135
[Close]
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 7.764e-29
Identity = 72/145 (49.66%), Postives = 93/145 (64.14%), Query Frame = 1 
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQWESCSYPFPKGLLTNPGSLFDGTKSRMDPFG*PKICSHVTKPTGNKYKTNWK 588
            M+ KRI KEL DL +DPP+SCSAGPV +D++HWQA+IMGPPDSPYAGGVF ++IHFP DYP KPPK+A  TK++   +  + G   L   K+QW S +    K LL+    L D      DP   P+I +H+ K    KY+   K
Sbjct:    1 MSLKRINKELSDLGRDPPSSCSAGPVGDDLYHWQASIMGPPDSPYAGGVFFLSIHFPTDYPLKPPKIALTTKIYHP-NINSNGNICLDILKDQW-SPALTISKVLLSICSLLTDANPD--DPLV-PEI-AHIYKQDRKKYEATAK 139
The following BLAST results are available for this feature:
BLAST of EY665235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
UB2D3_MACFA5.944e-2963.83Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fasci... [more]
UB2D3_HUMAN5.944e-2963.83Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens... [more]
UB2D2_XENLA5.944e-2963.83Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laev... [more]
UB2D2_RAT5.944e-2963.83Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norve... [more]
UB2D2_PIG5.944e-2963.83Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa G... [more]
UB2D2_MOUSE5.944e-2963.83Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus... [more]
UB2D2_HUMAN5.944e-2963.83Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens... [more]
UB2D2_BOVIN5.944e-2963.83Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus G... [more]
UBC4_SCHPO7.764e-2951.77Ubiquitin-conjugating enzyme E2 4 OS=Schizosacchar... [more]
UBC4_CANAL7.764e-2949.66Ubiquitin-conjugating enzyme E2 4 OS=Candida albic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-E10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665235 ID=EY665235; Name=EY665235; organism=Citrus sinensis; type=EST; length=1063bp
AATTTTTCTCCTGCTTCCATTTTTCCTTCGCCGTTCAATTTTTTTAAGTA
TCTCAGTTTTTGTTTCTAATTTTCCCGATCTCCCTGTCTCCCTCACGAAT
CCACATATTGCAAGGCCAAATCAGGAGGATCTGCTGCTTCTCAGGTTGAA
ACTATGGCGTCGAAACGGATCTTGAAGGAGCTCAAAGATTTGCAGAAGGA
TCCTCCTACATCATGCAGTGCCGGTCCTGTTGCTGAAGACATGTTTCATT
GGCAGGCGACAATCATGGGTCCTCCAGATAGTCCGTATGCTGGGGGTGTT
TTTCTAGTTACCATCCATTTTCCCCCAGACTATCCATTCAAGCCTCCCAA
GGTAGCATTCATGACAAAGGTATTTTCATCCTAACATTAAATAGCAATGG
GAGCATTTGCCTTGACATCTTGAAAGAACCAATGGGAGTCCTGCTCTTAC
CCATTTCCAAAGGGGTTGCTAACCAATCCTGGTTCATTATTTGACGGAAC
CAAATCCCGAATGGATCCGTTTGGGTAACCCAAAATTTGCTCACATGTTA
CAAAACCGACAGGGAACAAGTACAAAACCAACTGGAAGGGAACTGGAACC
CAAAAGTATGGCAATGGGCTAAACCCTGGGGTTTATGGGGGGGGAGGGGG
GGTCCCTTTTTCTTTTTTAATTCTGGGTTTTCAAGGTAAAGGAAAAAAAA
ATTCTGGACCGTGTCATATCCATAAAAAAGGTGGAAAATTAAAAAAAAGG
GTCCACATAATATCCCCCCCAAAATTGGAAAAAGGAAAAAAAACCGGGTT
AGATTTCTTAAAACTGGTAAAAAAGAGAAAAATGGTCACACTTGAGGTAC
AAAACAAAGAACTGGACTTTCACTAAAAATAGAGGTGTCCATTATGGACT
CCATCACTAAAATTTGTGTAATCGAACTTACTTTTTAAACAAAAATAAAG
TCAAAAAACAATTTTTATTATTTATTATAATAAGATAAAAAAAAAACAAA
ATAAAAGAAGAGAGGGGGGACGTACTGCTCATCNTATTTATCATGAGAAT
GATATCAATTGTA
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