EY665235

Overview
NameEY665235
Unique NameEY665235
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1063
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC1_COLGL (Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum gloeosporioides GN=UBC1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.950e-28
Identity = 59/94 (62.77%), Postives = 72/94 (76.60%), Query Frame = 1
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            MA KRI KEL DL +DPP+SCSAGPV ED+FHWQATIMGP DSPY+GGVF + IHFP DYPFKPPKV F T+++   +  + G+  L   ++QW
Sbjct:    1 MAFKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHP-NINSNGSICLDILRDQW 93          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC5_YEAST (Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae GN=UBC5 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.853e-28
Identity = 58/93 (62.37%), Postives = 71/93 (76.34%), Query Frame = 1
Query:  157 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            +SKRI KEL DL +DPP SCSAGPV +D++HWQA+IMGP DSPYAGGVF ++IHFP DYPFKPPKV F TK++   +  + G   L   K+QW
Sbjct:    3 SSKRIAKELSDLGRDPPASCSAGPVGDDLYHWQASIMGPSDSPYAGGVFFLSIHFPTDYPFKPPKVNFTTKIYHP-NINSSGNICLDILKDQW 94          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.239e-26
Identity = 57/94 (60.64%), Postives = 68/94 (72.34%), Query Frame = 1
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            MA KRI KEL DL +DPP  CSAGPV EDMFHWQATIMGP DSPY GG F +TI FP +YPFKPPKV F T+++   +  + G+  L   ++QW
Sbjct:    1 MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHP-NVNSNGSICLDILRSQW 93          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.239e-26
Identity = 57/94 (60.64%), Postives = 68/94 (72.34%), Query Frame = 1
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            MA KRI KEL DL +DPP  CSAGPV EDMFHWQATIMGP DSPY GG F +TI FP +YPFKPPKV F T+++   +  + G+  L   ++QW
Sbjct:    1 MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHP-NVNSNGSICLDILRSQW 93          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.619e-26
Identity = 60/95 (63.16%), Postives = 72/95 (75.79%), Query Frame = 1
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            MASKRI +EL+D+Q+ PP +CSAGPVAE D+FHWQATIMGP DSPY+GGVF V+I F  DYPFKPPKV F TKV+   +  + G+  L   K QW
Sbjct:    1 MASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHP-NIDSKGSICLDILKEQW 94          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.734e-20
Identity = 47/108 (43.52%), Postives = 71/108 (65.74%), Query Frame = 1
Query:  112 KAKSGGSAASQVETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            ++K   S  S++ + ++KRI KEL D+  DPP +CSAGP  ++++ W++TI+GPP S Y GGVF + I F P+YPFKPPKV F T+++   +  + G   L   K+ W
Sbjct:   33 ESKVSMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHC-NINSQGVICLDILKDNW 139          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.734e-20
Identity = 47/108 (43.52%), Postives = 71/108 (65.74%), Query Frame = 1
Query:  112 KAKSGGSAASQVETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            ++K   S  S++ + ++KRI KEL D+  DPP +CSAGP  ++++ W++TI+GPP S Y GGVF + I F P+YPFKPPKV F T+++   +  + G   L   K+ W
Sbjct:   33 ESKVSMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHC-NINSQGVICLDILKDNW 139          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.264e-20
Identity = 48/108 (44.44%), Postives = 69/108 (63.89%), Query Frame = 1
Query:  112 KAKSGGSAASQVETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            + K     A+++ T A KRI KEL ++  DPP +CSAGP  ++++ W++TI+GPP S Y GGVF + I F PDYPFKPPKV F T+++   +  + G   L   K+ W
Sbjct:   42 EGKISSKTAAKLSTSA-KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHC-NINSQGVICLDILKDNW 147          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.264e-20
Identity = 48/108 (44.44%), Postives = 69/108 (63.89%), Query Frame = 1
Query:  112 KAKSGGSAASQVETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            + K     A+++ T A KRI KEL ++  DPP +CSAGP  ++++ W++TI+GPP S Y GGVF + I F PDYPFKPPKV F T+++   +  + G   L   K+ W
Sbjct:   42 EGKISSKTAAKLSTSA-KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHC-NINSQGVICLDILKDNW 147          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.957e-20
Identity = 44/93 (47.31%), Postives = 63/93 (67.74%), Query Frame = 1
Query:  157 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            ++KRI KEL ++  DPP +CSAGP  ++++ W +TI+GPP S Y GGVF + IHF P+YPFKPPKV F T+++   +  + G   L   K+ W
Sbjct:   87 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHC-NINSQGVICLDILKDNW 178          
The following BLAST results are available for this feature:
BLAST of EY665235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
UBC1_COLGL2.950e-2862.77Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletot... [more]
UBC5_YEAST3.853e-2862.37Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharo... [more]
U2D2B_RAT1.239e-2660.64Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norv... [more]
U2D2B_MOUSE1.239e-2660.64Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculu... [more]
UBC12_ARATH1.619e-2663.16Probable ubiquitin-conjugating enzyme E2 12 OS=Ara... [more]
UB2E1_MOUSE1.734e-2043.52Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus... [more]
UB2E1_HUMAN1.734e-2043.52Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens... [more]
UB2E2_MOUSE2.264e-2044.44Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus... [more]
UB2E2_HUMAN2.264e-2044.44Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens... [more]
UBCD2_DROME2.957e-2047.31Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-E10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665235 ID=EY665235; Name=EY665235; organism=Citrus sinensis; type=EST; length=1063bp
AATTTTTCTCCTGCTTCCATTTTTCCTTCGCCGTTCAATTTTTTTAAGTA
TCTCAGTTTTTGTTTCTAATTTTCCCGATCTCCCTGTCTCCCTCACGAAT
CCACATATTGCAAGGCCAAATCAGGAGGATCTGCTGCTTCTCAGGTTGAA
ACTATGGCGTCGAAACGGATCTTGAAGGAGCTCAAAGATTTGCAGAAGGA
TCCTCCTACATCATGCAGTGCCGGTCCTGTTGCTGAAGACATGTTTCATT
GGCAGGCGACAATCATGGGTCCTCCAGATAGTCCGTATGCTGGGGGTGTT
TTTCTAGTTACCATCCATTTTCCCCCAGACTATCCATTCAAGCCTCCCAA
GGTAGCATTCATGACAAAGGTATTTTCATCCTAACATTAAATAGCAATGG
GAGCATTTGCCTTGACATCTTGAAAGAACCAATGGGAGTCCTGCTCTTAC
CCATTTCCAAAGGGGTTGCTAACCAATCCTGGTTCATTATTTGACGGAAC
CAAATCCCGAATGGATCCGTTTGGGTAACCCAAAATTTGCTCACATGTTA
CAAAACCGACAGGGAACAAGTACAAAACCAACTGGAAGGGAACTGGAACC
CAAAAGTATGGCAATGGGCTAAACCCTGGGGTTTATGGGGGGGGAGGGGG
GGTCCCTTTTTCTTTTTTAATTCTGGGTTTTCAAGGTAAAGGAAAAAAAA
ATTCTGGACCGTGTCATATCCATAAAAAAGGTGGAAAATTAAAAAAAAGG
GTCCACATAATATCCCCCCCAAAATTGGAAAAAGGAAAAAAAACCGGGTT
AGATTTCTTAAAACTGGTAAAAAAGAGAAAAATGGTCACACTTGAGGTAC
AAAACAAAGAACTGGACTTTCACTAAAAATAGAGGTGTCCATTATGGACT
CCATCACTAAAATTTGTGTAATCGAACTTACTTTTTAAACAAAAATAAAG
TCAAAAAACAATTTTTATTATTTATTATAATAAGATAAAAAAAAAACAAA
ATAAAAGAAGAGAGGGGGGACGTACTGCTCATCNTATTTATCATGAGAAT
GATATCAATTGTA
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