EY665235

Overview
NameEY665235
Unique NameEY665235
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1063
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.681e-13
Identity = 40/115 (34.78%), Postives = 68/115 (59.13%), Query Frame = 1
Query:  151 TMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQWESCSYPFPKGLLTNPGSLFD 495
            T + +R++++ K LQ+DPP   S  P  +++  W+A I GP ++P+  G F +++ F  +YP KPP V F++K+F   +  A G+  L   +N+W S +Y     +LT+  SL D
Sbjct:    3 TPSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHP-NVYADGSICLDILQNRW-SPTYDV-AAILTSIQSLLD 114          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.121e-13
Identity = 31/73 (42.47%), Postives = 47/73 (64.38%), Query Frame = 1
Query:  157 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVF 375
            +S+R+ KE  DL++ P        V +++FHW  T +GP DS YAGG F  ++ FP DYPF+PP + F T+++
Sbjct:    8 SSRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIY 80          

HSP 2 Score: 20.7866 bits (42), Expect = 5.121e-13
Identity = 8/19 (42.11%), Postives = 13/19 (68.42%), Query Frame = 3
Query:  372 IFILTLNSNGSICLDILKE 428
            I+    +S G++CL ILK+
Sbjct:   79 IYHPNFDSEGNVCLAILKQ 97          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.972e-13
Identity = 45/144 (31.25%), Postives = 74/144 (51.39%), Query Frame = 1
Query:  145 VETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQWESCSYPFPKGLLTNPGSLFDGTKSRMDPFG*PKICSHVTKPTGNKYK 576
            + T A +R++++ K +Q+D P+  SA P+ +++  W A I+GP D+P+  G F + + F   YP KPP V F++++F   +  A G   L   +N+W S +Y     +LT+  SL +           P I S       N YK
Sbjct:    1 MSTPAKRRLMRDFKRMQQDAPSGVSASPLPDNVMSWNAVIIGPADTPFEDGTFRLILQFDEQYPNKPPSVKFISEMFHP-NVYASGELCLDILQNRW-SPTYDV-SSILTSIQSLLND----------PNISSPANVEAANLYK 131          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 5.972e-13
Identity = 37/92 (40.22%), Postives = 51/92 (55.43%), Query Frame = 1
Query:  160 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            S+RI KEL D+Q+D         + +D+ H +    GP  +PY GG F+V I  P DYPF+PPK+ F TK++        GA  L   K+QW
Sbjct:    6 SRRIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQW 97          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.019e-12
Identity = 40/117 (34.19%), Postives = 69/117 (58.97%), Query Frame = 1
Query:  145 VETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQWESCSYPFPKGLLTNPGSLFD 495
            + T A +R++++ K +++D P   SA P+ +++  W A I+GP D+PY  G F + + F  DYP KPP V F++++F   +  A G   L   +N+W + +Y     +LT+  SLF+
Sbjct:    1 MSTPARRRLMRDFKRMKEDSPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEDYPNKPPHVKFLSEMFHP-NVYANGEICLDILQNRW-TPTYDV-ASILTSIQSLFN 114          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC2_USTMA (Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis GN=UBC2 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.330e-12
Identity = 35/97 (36.08%), Postives = 54/97 (55.67%), Query Frame = 1
Query:  145 VETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            + T + KR++++ K L  DPP   S  P A+++  W A I GP D+P+  G F + + F   YP KPP V F++K+F   +  A G   L   +N+W
Sbjct:    1 MSTPSKKRLIRDFKRLSTDPPGGISGAPCADNLMIWNAVIFGPADTPFEDGTFKLVLTFDESYPNKPPTVKFLSKMFHP-NVYANGELCLDILQNRW 96          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.964e-12
Identity = 39/117 (33.33%), Postives = 69/117 (58.97%), Query Frame = 1
Query:  145 VETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQWESCSYPFPKGLLTNPGSLFD 495
            + T A +R++++ K +++D P   SA P+ +++  W A I+GP D+PY  G F + + F  +YP KPP V F++++F   +  A G   L   +N+W + +Y     +LT+  SLF+
Sbjct:    1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHP-NVYANGEICLDILQNRW-TPTYDV-ASILTSIQSLFN 114          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.964e-12
Identity = 39/117 (33.33%), Postives = 69/117 (58.97%), Query Frame = 1
Query:  145 VETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQWESCSYPFPKGLLTNPGSLFD 495
            + T A +R++++ K +++D P   SA P+ +++  W A I+GP D+PY  G F + + F  +YP KPP V F++++F   +  A G   L   +N+W + +Y     +LT+  SLF+
Sbjct:    1 MSTPARRRLMRDFKRMKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHP-NVYANGEICLDILQNRW-TPTYDV-ASILTSIQSLFN 114          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.964e-12
Identity = 35/97 (36.08%), Postives = 55/97 (56.70%), Query Frame = 1
Query:  145 VETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQW 435
            + T A +R++++ K LQ DPP   S  P+  ++  WQA I GP DS + G  F +++ F  +YP   P V F++K+F   +  A G+  L   +NQW
Sbjct:    1 MSTAARRRLMRDFKRLQSDPPAGISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFSEEYPNDAPTVKFLSKMFHP-NVYADGSICLDILQNQW 96          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC2_ASHGO (Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii GN=UBC2 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.964e-12
Identity = 39/117 (33.33%), Postives = 69/117 (58.97%), Query Frame = 1
Query:  145 VETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQWESCSYPFPKGLLTNPGSLFD 495
            + T A +R++++ K +++D P   SA P+ +++  W A I+GP D+PY  G F + + F  +YP KPP V F++++F   +  A G   L   +N+W + +Y     +LT+  SLF+
Sbjct:    1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHP-NVYANGEICLDILQNRW-TPTYDV-ASILTSIQSLFN 114          
The following BLAST results are available for this feature:
BLAST of EY665235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
UBC1_CAEEL2.681e-1334.78Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditi... [more]
UBC14_SCHPO5.121e-1342.47Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccha... [more]
UBC2_DEBHA5.972e-1331.25Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces ... [more]
UBC1_SCHPO5.972e-1340.22Ubiquitin-conjugating enzyme E2 1 OS=Schizosacchar... [more]
UBC2_CANGA1.019e-1234.19Ubiquitin-conjugating enzyme E2 2 OS=Candida glabr... [more]
UBC2_USTMA1.330e-1236.08Ubiquitin-conjugating enzyme E2 2 OS=Ustilago mayd... [more]
UBC2_YEAST2.964e-1233.33Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces... [more]
UBC2_KLULA2.964e-1233.33Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces... [more]
UBC2_DICDI2.964e-1236.08Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium... [more]
UBC2_ASHGO2.964e-1233.33Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossyp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-E10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665235 ID=EY665235; Name=EY665235; organism=Citrus sinensis; type=EST; length=1063bp
AATTTTTCTCCTGCTTCCATTTTTCCTTCGCCGTTCAATTTTTTTAAGTA
TCTCAGTTTTTGTTTCTAATTTTCCCGATCTCCCTGTCTCCCTCACGAAT
CCACATATTGCAAGGCCAAATCAGGAGGATCTGCTGCTTCTCAGGTTGAA
ACTATGGCGTCGAAACGGATCTTGAAGGAGCTCAAAGATTTGCAGAAGGA
TCCTCCTACATCATGCAGTGCCGGTCCTGTTGCTGAAGACATGTTTCATT
GGCAGGCGACAATCATGGGTCCTCCAGATAGTCCGTATGCTGGGGGTGTT
TTTCTAGTTACCATCCATTTTCCCCCAGACTATCCATTCAAGCCTCCCAA
GGTAGCATTCATGACAAAGGTATTTTCATCCTAACATTAAATAGCAATGG
GAGCATTTGCCTTGACATCTTGAAAGAACCAATGGGAGTCCTGCTCTTAC
CCATTTCCAAAGGGGTTGCTAACCAATCCTGGTTCATTATTTGACGGAAC
CAAATCCCGAATGGATCCGTTTGGGTAACCCAAAATTTGCTCACATGTTA
CAAAACCGACAGGGAACAAGTACAAAACCAACTGGAAGGGAACTGGAACC
CAAAAGTATGGCAATGGGCTAAACCCTGGGGTTTATGGGGGGGGAGGGGG
GGTCCCTTTTTCTTTTTTAATTCTGGGTTTTCAAGGTAAAGGAAAAAAAA
ATTCTGGACCGTGTCATATCCATAAAAAAGGTGGAAAATTAAAAAAAAGG
GTCCACATAATATCCCCCCCAAAATTGGAAAAAGGAAAAAAAACCGGGTT
AGATTTCTTAAAACTGGTAAAAAAGAGAAAAATGGTCACACTTGAGGTAC
AAAACAAAGAACTGGACTTTCACTAAAAATAGAGGTGTCCATTATGGACT
CCATCACTAAAATTTGTGTAATCGAACTTACTTTTTAAACAAAAATAAAG
TCAAAAAACAATTTTTATTATTTATTATAATAAGATAAAAAAAAAACAAA
ATAAAAGAAGAGAGGGGGGACGTACTGCTCATCNTATTTATCATGAGAAT
GATATCAATTGTA
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