EY665226
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 7.677e-39 Identity = 89/150 (59.33%), Postives = 104/150 (69.33%), Query Frame = 2 Query: 104 APSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 AP +EL +GGRI+MR+T + S WYGPDR KYLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L++ + + G + FSEGGLD LG + +SILA A Sbjct: 16 APRRDELVRRVGDSGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG-AQIFSEGGLDYLGNPN--LVHAQSILAIWA 160
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.003e-38 Identity = 85/137 (62.04%), Postives = 98/137 (71.53%), Query Frame = 2 Query: 128 NGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 NGGR +MR+T + S WYG DR KYLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++ + + G + FSEGGLD LG + +SILA A Sbjct: 31 NGGRATMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGS-QIFSEGGLDYLGNPN--LIHAQSILAVWA 162
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.710e-38 Identity = 92/159 (57.86%), Postives = 106/159 (66.67%), Query Frame = 2 Query: 80 FVGKAVNLAPSGNELSNG------GRISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 FVG+AV S NE GRI+MR+T + S WYG DR KYLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++ + + G + FSEGGLD LG + +SILA A Sbjct: 11 FVGQAVG--KSQNEFIRKVGNFGEGRITMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGS-QIFSEGGLDYLGNPN--LVHAQSILAIWA 162
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 2.234e-38 Identity = 84/136 (61.76%), Postives = 97/136 (71.32%), Query Frame = 2 Query: 131 GGRISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 GGR++MR+T + S WYG DR KYLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++ + G + FSEGGLD LG + +SILA A Sbjct: 4 GGRVTMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGS-QIFSEGGLDYLGNPN--LIHAQSILAIWA 134
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 6.499e-38 Identity = 84/136 (61.76%), Postives = 96/136 (70.59%), Query Frame = 2 Query: 131 GGRISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 GGR +MR+T + S WYG DR KYLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++ + G + FSEGGLD LG + +SILA A Sbjct: 32 GGRATMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGS-QIFSEGGLDYLGNPN--LIHAQSILAIWA 162
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.448e-37 Identity = 82/134 (61.19%), Postives = 96/134 (71.64%), Query Frame = 2 Query: 137 RISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 R++MR+T SKS S + WYG DR K+LGP SGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PELLA+ + + G + FSEGGLD LG + +SILA A Sbjct: 35 RVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAG-AQIFSEGGLDYLGNPS--LVHAQSILAIWA 165
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.470e-37 Identity = 89/151 (58.94%), Postives = 100/151 (66.23%), Query Frame = 2 Query: 101 LAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 L P NEL + RI+MR+T + S WYGPDR KYLGP S PSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIHCRWAMLGALGCVFPELLA+ + + G + FSEGGLD G + +SILA A Sbjct: 18 LRPQQNELVKKVGTAQARITMRRTVRSAPES--IWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAG-AQIFSEGGLDYAGNPN--LIHAQSILAIWA 163
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 3.225e-37 Identity = 86/135 (63.70%), Postives = 97/135 (71.85%), Query Frame = 2 Query: 134 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 GR SMR+T K+V S WYG DR K+LGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+FPELL++ Q + G + FSEGGLD LG + +SILA A Sbjct: 32 GRFSMRRT-VKAVPQ-SIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAG-AQIFSEGGLDYLGNPN--LVHAQSILAIWA 161
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 5.502e-37 Identity = 88/146 (60.27%), Postives = 98/146 (67.12%), Query Frame = 2 Query: 116 NELSNG-----GRISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 NELS R+ M SK+ SGS WYG DR YLGP SG PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+ + + G + F+EGGLD LG + +SILA A Sbjct: 21 NELSRKVGAGEARVQMMAPKSKA-PSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS-QIFAEGGLDYLGNPS--LVHAQSILAIWA 162
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.355e-35 Identity = 81/134 (60.45%), Postives = 93/134 (69.40%), Query Frame = 2 Query: 137 RISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 R +MR+T + S WYGPDR KYLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPELL + + + G + F+EGGLD LG + +SILA A Sbjct: 34 RFTMRRTVKSAPES--IWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGS-QIFAEGGLDYLGNPN--LIHAQSILAIWA 162 The following BLAST results are available for this feature:
BLAST of EY665226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665226 ID=EY665226; Name=EY665226; organism=Citrus sinensis; type=EST; length=1008bpback to top |