EY665225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.151e-50 Identity = 94/122 (77.05%), Postives = 104/122 (85.25%), Query Frame = 1 Query: 1 QTMKDRWTPLAYDESDDQQDITPGKGAVDSLFQAPMGTGTHYSVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFPKMGI*P 366 QT KD+W LA+D SDDQQDIT GKG D LFQAPMGTGTH +V+SSY+YIS GLR Y+ DN +DG YIAPAFMDKL VHI KNF++LPNIKVPLILG+WGGKGQGKSFQCELVF KMGI P Sbjct: 62 QTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINP 183 HSP 2 Score: 21.557 bits (44), Expect = 1.151e-50 Identity = 11/30 (36.67%), Postives = 16/30 (53.33%), Query Frame = 3 Query: 408 GKHPNLNKQRNMERTELIKKRKTGRRLLND 497 G+ L +QR E ++IKK K +ND Sbjct: 197 GEPAKLIRQRYREAADIIKKGKMCCLFIND 226
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.499e-50 Identity = 94/118 (79.66%), Postives = 104/118 (88.14%), Query Frame = 1 Query: 13 DRWTPLAYDESDDQQDITPGKGAVDSLFQAPMGTGTHYSVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFPKMGI*P 366 D+W LAYD SDDQQDIT GKG VDSLFQAP G GTH +V+SSY+Y+SQGLR Y+ DNTM G YIAPAFMDKLVVH++KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF KMGI P Sbjct: 59 DKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINP 176 HSP 2 Score: 21.557 bits (44), Expect = 1.499e-50 Identity = 11/30 (36.67%), Postives = 16/30 (53.33%), Query Frame = 3 Query: 408 GKHPNLNKQRNMERTELIKKRKTGRRLLND 497 G+ L +QR E ++IKK K +ND Sbjct: 190 GEPAKLIRQRYREAADMIKKGKMCCLFIND 219
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 1.580e-50 Identity = 99/122 (81.15%), Postives = 104/122 (85.25%), Query Frame = 1 Query: 1 QTMKDRWTPLAYDESDDQQDITPGKGAVDSLFQAPMGTGTHYSVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFPKMGI*P 366 QT KDRW LAYD SDDQQDIT GKG VD LFQAPM GTHY+VMSSY+Y+S GLR LDN DG YIAPAF+DKLVVHITKNFM+LPNIKVPLILGIWGGKGQGKSFQCELVF KMGI P Sbjct: 69 QTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINP 188
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 4.598e-50 Identity = 92/122 (75.41%), Postives = 106/122 (86.89%), Query Frame = 1 Query: 1 QTMKDRWTPLAYDESDDQQDITPGKGAVDSLFQAPMGTGTHYSVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFPKMGI*P 366 +T +DRW L + SDDQQDI GKG VDSLFQAP GTGTH+++M+SY+Y+SQ L+TY LDN +DG YIAPAFMDKLVVHITKNF++LPNIKVPLILG+WGGKGQGKSFQCELVF KMGI P Sbjct: 64 ETKEDRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINP 185
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 3.770e-44 Identity = 84/118 (71.19%), Postives = 96/118 (81.36%), Query Frame = 1 Query: 13 DRWTPLAYDESDDQQDITPGKGAVDSLFQAPMGTGTHYSVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFPKMGI*P 366 D+W LA D SDDQ DI GKG VDSLFQAP GTH + SS++Y SQGLR Y++DN + YIAPAFMDKLVVHITKNF++LPNIK+PLILG+WGGKGQGKSFQCELVF K+GI P Sbjct: 67 DKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINP 184
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCA_CHLRE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.911e-33 Identity = 71/120 (59.17%), Postives = 86/120 (71.67%), Query Frame = 1 Query: 16 RWTPL--AYDESDDQQDITPGKGAVDSLFQAPMGTG-THYSVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFPKMGI*P 366 RW + D SDDQQDIT G+ VD LFQ G G TH +V+SS +Y+SQ ++N N DG YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQGK+FQC L + K+GI P Sbjct: 42 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGIAP 159
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCA_ANASC (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain CA / ATCC 33047) GN=rca PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.950e-16 Identity = 38/53 (71.70%), Postives = 46/53 (86.79%), Query Frame = 1 Query: 202 YIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFPKMGI 360 YIAP F+DKL VHITKNF++LP ++VPLILGI G KG+GK+FQCEL F KMG+ Sbjct: 4 YIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGV 56
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCA_ANASP (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain PCC 7120) GN=rca PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.547e-16 Identity = 38/53 (71.70%), Postives = 46/53 (86.79%), Query Frame = 1 Query: 202 YIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFPKMGI 360 YIAP F+DKL VHITKNF+++P ++VPLILGI G KG+GK+FQCEL F KMGI Sbjct: 4 YIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGI 56
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCA_ARAHY (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Arachis hypogaea GN=RCA PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.070e-14 Identity = 49/94 (52.13%), Postives = 52/94 (55.32%), Query Frame = 1 Query: 28 LAYDESDDQQDITPGKGAVDSLFQAPMGTGTHYSVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGK 309 LAYD SDDQQDIT +G VDSLFQAPM GTHY+VMSSY+YISQGLR VPLILGIWGGK Sbjct: 2 LAYDISDDQQDIT--RGMVDSLFQAPMNDGTHYAVMSSYEYISQGLR------------------------------------VPLILGIWGGK 57 The following BLAST results are available for this feature:
BLAST of EY665225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665225 ID=EY665225; Name=EY665225; organism=Citrus sinensis; type=EST; length=1052bpback to top |