EY665220

Overview
NameEY665220
Unique NameEY665220
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1009
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665220_ssr31 microsatellite EY665220_ssr31:31..56. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD1_MALGO (Adenylate kinase 1 OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=ADK1 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.591e-28
Identity = 71/160 (44.38%), Postives = 103/160 (64.38%), Query Frame = 2
Query:  182 KCASKPDKRLILVGPPGSGKGTQSPIIKDEY--CLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGII-DEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVG*GSQLLLLMMAVLEKKDNWSLDPPFQGAGPYHTKFCPPPRFP 652
            K  +    R++LVGPPG+GKGTQ+P I + +   +CHLATGD+LR  VA  T LG +AK+ MD+G LVSD+++VG+I D+     SC+KGFILDGFPRT  QA+KLD+ML  + +K+    +L +    ++ +     + P   G+G  + K   PP+ P
Sbjct:   29 KAPANQGVRMVLVGPPGAGKGTQAPKILERFQNMVCHLATGDLLRQQVAMGTDLGKQAKKIMDQGALVSDEIMVGMIKDQLETNRSCKKGFILDGFPRTTPQAEKLDQMLSDRKQKLDHVIELQIPDELLISRITGRLIHP---GSGRSYHKIFSPPKQP 185          
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD1_NEUCR (Adenylate kinase 1 OS=Neurospora crassa GN=adk-1 PE=3 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 4.690e-28
Identity = 72/146 (49.32%), Postives = 96/146 (65.75%), Query Frame = 2
Query:  206 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGII-DEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVG*GSQLLLLMMAVLEKKDNWSLDPPFQGAGPYHTKFCPP 640
            R++L+GPPG+GKGTQ+P IK+++  CHLATGDMLRA VA  T LG +AK+ M++G LVSDD+V+G+I DE      CQ GFILDGFPRT  QA+ LD ML ++   +    + L +  ++L  +    L  P  G   YH  F PP
Sbjct:   42 RMVLMGPPGAGKGTQAPKIKEKFNCCHLATGDMLRAQVAKGTALGKQAKKIMNEGGLVSDDIVIGMIKDELENNKECQGGFILDGFPRTVPQAEGLDAMLRERNLPLQHAVE-LKIDDSLLVARITGRLVHPASGRS-YHRIFNPP 185          
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD_XANP2 (Adenylate kinase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=adk PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 6.125e-28
Identity = 60/106 (56.60%), Postives = 80/106 (75.47%), Query Frame = 2
Query:  206 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKV 523
            RL+L+GPPG+GKGTQ+  +   + +  L+TGDMLRAAVAA TP+G+KAK  MD G LVSD++V+GII E +  P  + GFILDGFPRT  QA+ LD++L  +G K+
Sbjct:    2 RLVLLGPPGAGKGTQAQRLVARHGIVQLSTGDMLRAAVAAGTPVGLKAKAVMDAGGLVSDEIVIGIIAERLDSPDAKNGFILDGFPRTVAQAEALDQLLASKGLKL 107          
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD_AZOC5 (Adenylate kinase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=adk PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.000e-28
Identity = 60/106 (56.60%), Postives = 81/106 (76.42%), Query Frame = 2
Query:  206 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKV 523
            RL+L+GPPG+GKGTQ+  +   + +  L+TGDMLRAAVAA TP+G+KAK  M+ G LVSD++V+GII E + +P  +KGFILDGFPRT  QA  LD++L  +G K+
Sbjct:    2 RLVLLGPPGAGKGTQALRLVQRHGIVQLSTGDMLRAAVAAGTPVGLKAKAVMESGGLVSDEIVIGIIAERLDQPDARKGFILDGFPRTVAQADALDKLLADKGLKL 107          
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD_CLOK5 (Adenylate kinase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=adk PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.045e-27
Identity = 60/155 (38.71%), Postives = 93/155 (60.00%), Query Frame = 2
Query:  206 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVG*GSQLLLLMMAVLEKKDNWSLDPPFQGAGPYHTKFCPPPRFPGVEQCN 670
            ++IL+GPPG+GKGTQ+  I +EY + H++TGD+ R  ++ KTPLGI+AKE +DKG+LV D++ + I+ + + +  C+ GF+LDGFPRT  QA+ LD  L     K+     + +    + ++     + P       YH KF PP      + CN
Sbjct:    2 KIILLGPPGAGKGTQAKFISEEYSIPHISTGDIFRKNISDKTPLGIEAKEYLDKGQLVPDEVTINIVKDRLSEDDCESGFLLDGFPRTVYQAEALDSFLNANDNKIDMVLLIDVPRELIFDRMTGRRICP--SCGASYHVKFNPPKLKDKCDICN 154          
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD_CLOK1 (Adenylate kinase OS=Clostridium kluyveri (strain NBRC 12016) GN=adk PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.045e-27
Identity = 60/155 (38.71%), Postives = 93/155 (60.00%), Query Frame = 2
Query:  206 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVG*GSQLLLLMMAVLEKKDNWSLDPPFQGAGPYHTKFCPPPRFPGVEQCN 670
            ++IL+GPPG+GKGTQ+  I +EY + H++TGD+ R  ++ KTPLGI+AKE +DKG+LV D++ + I+ + + +  C+ GF+LDGFPRT  QA+ LD  L     K+     + +    + ++     + P       YH KF PP      + CN
Sbjct:    2 KIILLGPPGAGKGTQAKFISEEYSIPHISTGDIFRKNISDKTPLGIEAKEYLDKGQLVPDEVTINIVKDRLSEDDCESGFLLDGFPRTVYQAEALDSFLNANDNKIDMVLLIDVPRELIFDRMTGRRICP--SCGASYHVKFNPPKLKDKCDICN 154          
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD_BACSU (Adenylate kinase OS=Bacillus subtilis GN=adk PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.782e-27
Identity = 55/105 (52.38%), Postives = 81/105 (77.14%), Query Frame = 2
Query:  209 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKV 523
            L+L+G PG+GKGTQ   I ++Y + H++TGDM RAA+  +TPLG++AK  +DKGELV D++ +GI+ E + K  C++GF+LDGFPRT  QA+ L+E+LE+ GK +
Sbjct:    3 LVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPI 107          
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD_ACICJ (Adenylate kinase OS=Acidiphilium cryptum (strain JF-5) GN=adk PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.782e-27
Identity = 71/150 (47.33%), Postives = 96/150 (64.00%), Query Frame = 2
Query:  209 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVG*GSQLLLLMMAVLEKKDNWSLDPPFQGAGPYHTKFCPPPRFPGV 658
            +IL+GPPG+GKGTQ+ I++D Y +  +ATGDMLRA V A T LG  AK  M+ G LVSD++++G++   + +P C+ GFILDGFPRT  QA+ LD ML +Q   +     LL +  AVL ++ +        GAG YH KF  P   PGV
Sbjct:    3 IILLGPPGAGKGTQAKILQDRYGVAQIATGDMLRAEVKAGTELGRAAKAVMESGALVSDEIIIGMLRNRLSQPDCRNGFILDGFPRTVPQAEALDTMLAEQKFDLD-AVILLKVDEAVLVERISGRFTCAHCGAG-YHDKF-HPTGVPGV 149          
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD_CLOBJ (Adenylate kinase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=adk PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.328e-27
Identity = 60/145 (41.38%), Postives = 92/145 (63.45%), Query Frame = 2
Query:  206 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVG*GSQLLLLMMAVLEKKDNWSLDPPFQGAGPYHTKFCPP 640
            R+IL+GPPG+GKGTQ+ +I +E+ + H++TGD+ RA +  KTPLGI+AK  +D G+LV D++ +GI+ + + K  C  GF+LDGFPRT  QA+ LDE L+   K++     + +    +LE+     +         YH +F PP
Sbjct:    2 RIILLGPPGAGKGTQAKLISEEFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVPDEVTIGIVKDRLTKDDCDNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEEFILERMTGRRVCT--SCGASYHIRFNPP 144          
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD_CLOBH (Adenylate kinase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=adk PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.328e-27
Identity = 60/145 (41.38%), Postives = 92/145 (63.45%), Query Frame = 2
Query:  206 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVG*GSQLLLLMMAVLEKKDNWSLDPPFQGAGPYHTKFCPP 640
            R+IL+GPPG+GKGTQ+ +I +E+ + H++TGD+ RA +  KTPLGI+AK  +D G+LV D++ +GI+ + + K  C  GF+LDGFPRT  QA+ LDE L+   K++     + +    +LE+     +         YH +F PP
Sbjct:    2 RIILLGPPGAGKGTQAKLISEEFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVPDEVTIGIVKDRLTKDDCDNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEEFILERMTGRRVCT--SCGASYHIRFNPP 144          
The following BLAST results are available for this feature:
BLAST of EY665220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD1_MALGO3.591e-2844.38Adenylate kinase 1 OS=Malassezia globosa (strain A... [more]
KAD1_NEUCR4.690e-2849.32Adenylate kinase 1 OS=Neurospora crassa GN=adk-1 P... [more]
KAD_XANP26.125e-2856.60Adenylate kinase OS=Xanthobacter autotrophicus (st... [more]
KAD_AZOC58.000e-2856.60Adenylate kinase OS=Azorhizobium caulinodans (stra... [more]
KAD_CLOK51.045e-2738.71Adenylate kinase OS=Clostridium kluyveri (strain A... [more]
KAD_CLOK11.045e-2738.71Adenylate kinase OS=Clostridium kluyveri (strain N... [more]
KAD_BACSU1.782e-2752.38Adenylate kinase OS=Bacillus subtilis GN=adk PE=1 ... [more]
KAD_ACICJ1.782e-2747.33Adenylate kinase OS=Acidiphilium cryptum (strain J... [more]
KAD_CLOBJ2.328e-2741.38Adenylate kinase OS=Clostridium botulinum (strain ... [more]
KAD_CLOBH2.328e-2741.38Adenylate kinase OS=Clostridium botulinum (strain ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-D07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665220 ID=EY665220; Name=EY665220; organism=Citrus sinensis; type=EST; length=1009bp
CCCGCGTCCGAAAAATCAATCAAAATCAGACTCTCTCTCTCTCTCTCTCT
CTCTCTAATATCCGTCCAAAGAGGGAGGAAAACCCTAAACGGCACCGTCT
GCAAAAATGGCGAGCAGTTCAGCGGCGAACCTGGAAGATGTGCCGTCGGT
GGATCTCATGACTGAGCTCCTCCGTCGCATGAAGTGCGCCTCCAAGCCAG
ACAAGCGCCTCATTCTCGTTGGCCCACCCGGATCAGGAAAGGGTACTCAA
TCGCCCATCATTAAAGATGAATATTGCTTGTGTCACTTGGCTACTGGTGA
TATGTTGAGAGCCGCTGTTGCTGCTAAAACTCCTCTTGGGATCAAGGCTA
AGGAGGCTATGGACAAGGGAGAACTTGTTTCTGATGACTTGGTTGTTGGT
ATCATAGATGAAGCAATGAAGAAACCTTCTTGTCAGAAAGGTTTCATTCT
TGACGGGTTTCCCAGAACTGAGGTCCAAGCTCAAAAGCTGGACGAGATGC
TTGAGAAACAGGGAAAAAAAGTTGGATAAGGTTCTCAACTTTTGCTATTG
ATGATGGCGGTTTTGGAAAAAAAGGATAACTGGTCGCTGGATCCCCCCTT
TCAAGGGGCAGGACCCTACCACACAAAATTTTGCCCCCCCCCAAGGTTTC
CGGGGGTTGAACAATGTAACTGGGGAAACCTTTTGGATTCAACGTTAAAG
AATAAAACTGGCAGCTTGTTTCCAAGGTCAAGGGTGGGAAACCTTTTCCC
CAACCCAAATTGGAACCGCGTAATTTGTTTATTTAACTCCCAAAAAGGGG
CTTTTGTTTGCCCAAAATACACTGGCTTGGAAAAAACCCCCCCTCAAAAA
AAATTTTATATATTCAGAGGGTGTAAAAAAAACCACTTTTTCTCCCCGAG
GATGGGGGGGGCCAACCACACCGGAGGGGGGTTCTCTTTTTAATTTGGGG
TTTTTAATTTTTTTTAAATTTTTTTTATCACACCGCAAAAAAAATAGAAA
AACATTCCT
back to top