EY665220

Overview
NameEY665220
Unique NameEY665220
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1009
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665220_ssr31 microsatellite EY665220_ssr31:31..56. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD_CLOB1 (Adenylate kinase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=adk PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.328e-27
Identity = 60/145 (41.38%), Postives = 92/145 (63.45%), Query Frame = 2
Query:  206 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVG*GSQLLLLMMAVLEKKDNWSLDPPFQGAGPYHTKFCPP 640
            R+IL+GPPG+GKGTQ+ +I +E+ + H++TGD+ RA +  KTPLGI+AK  +D G+LV D++ +GI+ + + K  C  GF+LDGFPRT  QA+ LDE L+   K++     + +    +LE+     +         YH +F PP
Sbjct:    2 RIILLGPPGAGKGTQAKLISEEFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVPDEVTIGIVKDRLTKDDCDNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEEFILERMTGRRVCT--SCGASYHIRFNPP 144          
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD_BACA2 (Adenylate kinase OS=Bacillus amyloliquefaciens (strain FZB42) GN=adk PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.328e-27
Identity = 69/165 (41.82%), Postives = 99/165 (60.00%), Query Frame = 2
Query:  209 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVG*GSQLLLLMMAVLEKKDNWSLDPPFQG-------AGPYHTKFCPPPRFPGVEQCNWGNL 682
            L+L+G PG+GKGTQ   I ++Y + H++TGDM RAA+  +TPLG++AK  +DKGELV D++ +GI+ E + K  C++GF+LDGFPRT  QA+ L+ +LE+ GK +            +  K D  SL     G          YH  F  PP+ PGV   + G+L
Sbjct:    3 LVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALENILEEYGKPID---------YVINIKVDKDSLMERLTGRRICSVCGTTYHLVF-NPPKTPGVCDKDGGDL 157          
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD_XANC5 (Adenylate kinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=adk PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.040e-27
Identity = 57/104 (54.81%), Postives = 81/104 (77.88%), Query Frame = 2
Query:  206 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGK 517
            RL+L+GPPGSGKGTQ+  +KD + + H++TGD+LRA VAA +PLG+KAKE M +G+LVSDD+++G+++  + +    KGFILDG+PR   QA  LDE+L K G+
Sbjct:    2 RLVLLGPPGSGKGTQATRLKDTFDIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKGFILDGYPRNVAQANALDELLGKIGQ 105          
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD_XANAC (Adenylate kinase OS=Xanthomonas axonopodis pv. citri GN=adk PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.040e-27
Identity = 57/104 (54.81%), Postives = 81/104 (77.88%), Query Frame = 2
Query:  206 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGK 517
            RL+L+GPPGSGKGTQ+  +KD + + H++TGD+LRA VAA +PLG+KAKE M +G+LVSDD+++G+++  + +    KGFILDG+PR   QA  LDE+L K G+
Sbjct:    2 RLVLLGPPGSGKGTQATRLKDTFDIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKGFILDGYPRNVAQANALDELLGKIGQ 105          
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD_CLOBM (Adenylate kinase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=adk PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.040e-27
Identity = 60/145 (41.38%), Postives = 92/145 (63.45%), Query Frame = 2
Query:  206 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVG*GSQLLLLMMAVLEKKDNWSLDPPFQGAGPYHTKFCPP 640
            R+IL+GPPG+GKGTQ+ +I +++ + H++TGD+ RA +  KTPLGI+AK  MD G+LV D++ +GI+ + + K  C  GF+LDGFPRT  QA+ LDE L+   K++     + +    +LE+     +         YH +F PP
Sbjct:    2 RVILLGPPGAGKGTQAKLISEKFSIPHISTGDIFRANIKEKTPLGIEAKRYMDNGQLVPDEVTIGIVKDRLTKDDCDNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEEFILERMTGRRVCT--SCGASYHIRFNPP 144          
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD_MAGSA (Adenylate kinase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=adk PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.185e-27
Identity = 59/105 (56.19%), Postives = 79/105 (75.24%), Query Frame = 2
Query:  209 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKV 523
            L+L+GPPG GKGTQ+  ++D+Y L  L+TGDMLRAAVA+ + +G KAK  MD G+LVSD++V+ IIDE + +    KG I DGFPRT  QA+ LD M+ K+GKK+
Sbjct:    3 LVLLGPPGGGKGTQAKRLQDKYGLVQLSTGDMLRAAVASGSEVGKKAKAVMDAGQLVSDEIVIAIIDERLDQADVAKGAIFDGFPRTVAQAEALDAMMAKKGKKL 107          
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD_CLOBL (Adenylate kinase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=adk PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 6.772e-27
Identity = 59/145 (40.69%), Postives = 92/145 (63.45%), Query Frame = 2
Query:  206 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVG*GSQLLLLMMAVLEKKDNWSLDPPFQGAGPYHTKFCPP 640
            R+IL+GPPG+GKGTQ+ +I +++ + H++TGD+ RA +  KTPLGI+AK  +D G+LV D++ +GI+ + + K  C  GF+LDGFPRT  QA+ LDE L+   K++     + +    +LE+     +         YH +F PP
Sbjct:    2 RIILLGPPGAGKGTQAKLISEKFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVPDEVTIGIVKDRLTKDDCDNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEEFILERMTGRRVCT--SCGASYHIRFNPP 144          
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD_METRJ (Adenylate kinase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=adk PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 8.845e-27
Identity = 59/103 (57.28%), Postives = 79/103 (76.70%), Query Frame = 2
Query:  206 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQG 514
            R+IL+GPPG+GKGTQS  I   + +  L+TGDMLRAAVAA TP+G++AK  M+ G LVSD +VVGI+ + +++P  ++GFILDGFPRT  QA+ L EML  +G
Sbjct:    2 RIILLGPPGAGKGTQSERIVQRFGIPQLSTGDMLRAAVAAGTPVGLEAKAVMESGGLVSDRIVVGIVADRIEEPDARRGFILDGFPRTVAQAEALGEMLASKG 104          
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD_JANMA (Adenylate kinase OS=Janthinobacterium sp. (strain Marseille) GN=adk PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 8.845e-27
Identity = 63/145 (43.45%), Postives = 95/145 (65.52%), Query Frame = 2
Query:  206 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVG*GSQLLLLMMAVLEKKDNWSLDPPFQGAGPYHTKFCPP 640
            RLIL+G PG+GKGTQ+  IKD++ +  ++TGDMLRAAV A TPLGI AK+ MD+G LVSDD+++G++ + +K+  C KG++ DGFPRT  QA    + +++ G  +    ++ +   A++E+     + P       YH KF PP
Sbjct:    2 RLILLGAPGAGKGTQAGFIKDKFNIPQISTGDMLRAAVKAGTPLGIAAKKIMDEGGLVSDDIIIGLVKDRLKEADCAKGYLFDGFPRTIPQA----DAMKEAGVAIDYVLEIDVPDEAIVERMSGRRVHP--ASGRTYHVKFNPP 140          
BLAST of EY665220 vs. ExPASy Swiss-Prot
Match: KAD_CLOBK (Adenylate kinase OS=Clostridium botulinum (strain Okra / Type B1) GN=adk PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 8.845e-27
Identity = 59/145 (40.69%), Postives = 92/145 (63.45%), Query Frame = 2
Query:  206 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVG*GSQLLLLMMAVLEKKDNWSLDPPFQGAGPYHTKFCPP 640
            R+IL+GPPG+GKGTQ+ +I +++ + H++TGD+ RA +  KTPLGI+AK  +D G+LV D++ +GI+ + + K  C  GF+LDGFPRT  QA+ LDE L+   K++     + +    +LE+     +         YH +F PP
Sbjct:    2 RIILLGPPGAGKGTQAKLISEKFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVPDEVTIGIVKDRLTKDDCDNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEGFILERMTGRRVCT--SCGASYHIRFNPP 144          
The following BLAST results are available for this feature:
BLAST of EY665220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_CLOB12.328e-2741.38Adenylate kinase OS=Clostridium botulinum (strain ... [more]
KAD_BACA22.328e-2741.82Adenylate kinase OS=Bacillus amyloliquefaciens (st... [more]
KAD_XANC53.040e-2754.81Adenylate kinase OS=Xanthomonas campestris pv. ves... [more]
KAD_XANAC3.040e-2754.81Adenylate kinase OS=Xanthomonas axonopodis pv. cit... [more]
KAD_CLOBM3.040e-2741.38Adenylate kinase OS=Clostridium botulinum (strain ... [more]
KAD_MAGSA5.185e-2756.19Adenylate kinase OS=Magnetospirillum magneticum (s... [more]
KAD_CLOBL6.772e-2740.69Adenylate kinase OS=Clostridium botulinum (strain ... [more]
KAD_METRJ8.845e-2757.28Adenylate kinase OS=Methylobacterium radiotolerans... [more]
KAD_JANMA8.845e-2743.45Adenylate kinase OS=Janthinobacterium sp. (strain ... [more]
KAD_CLOBK8.845e-2740.69Adenylate kinase OS=Clostridium botulinum (strain ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-D07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665220 ID=EY665220; Name=EY665220; organism=Citrus sinensis; type=EST; length=1009bp
CCCGCGTCCGAAAAATCAATCAAAATCAGACTCTCTCTCTCTCTCTCTCT
CTCTCTAATATCCGTCCAAAGAGGGAGGAAAACCCTAAACGGCACCGTCT
GCAAAAATGGCGAGCAGTTCAGCGGCGAACCTGGAAGATGTGCCGTCGGT
GGATCTCATGACTGAGCTCCTCCGTCGCATGAAGTGCGCCTCCAAGCCAG
ACAAGCGCCTCATTCTCGTTGGCCCACCCGGATCAGGAAAGGGTACTCAA
TCGCCCATCATTAAAGATGAATATTGCTTGTGTCACTTGGCTACTGGTGA
TATGTTGAGAGCCGCTGTTGCTGCTAAAACTCCTCTTGGGATCAAGGCTA
AGGAGGCTATGGACAAGGGAGAACTTGTTTCTGATGACTTGGTTGTTGGT
ATCATAGATGAAGCAATGAAGAAACCTTCTTGTCAGAAAGGTTTCATTCT
TGACGGGTTTCCCAGAACTGAGGTCCAAGCTCAAAAGCTGGACGAGATGC
TTGAGAAACAGGGAAAAAAAGTTGGATAAGGTTCTCAACTTTTGCTATTG
ATGATGGCGGTTTTGGAAAAAAAGGATAACTGGTCGCTGGATCCCCCCTT
TCAAGGGGCAGGACCCTACCACACAAAATTTTGCCCCCCCCCAAGGTTTC
CGGGGGTTGAACAATGTAACTGGGGAAACCTTTTGGATTCAACGTTAAAG
AATAAAACTGGCAGCTTGTTTCCAAGGTCAAGGGTGGGAAACCTTTTCCC
CAACCCAAATTGGAACCGCGTAATTTGTTTATTTAACTCCCAAAAAGGGG
CTTTTGTTTGCCCAAAATACACTGGCTTGGAAAAAACCCCCCCTCAAAAA
AAATTTTATATATTCAGAGGGTGTAAAAAAAACCACTTTTTCTCCCCGAG
GATGGGGGGGGCCAACCACACCGGAGGGGGGTTCTCTTTTTAATTTGGGG
TTTTTAATTTTTTTTAAATTTTTTTTATCACACCGCAAAAAAAATAGAAA
AACATTCCT
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