EY665218

Overview
NameEY665218
Unique NameEY665218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1045
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665218_ssr471 microsatellite EY665218_ssr471:471..482. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK_LITCN (S-adenosylmethionine synthetase OS=Litchi chinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 8.597e-49
Identity = 90/99 (90.91%), Postives = 98/99 (98.99%), Query Frame = 1
Query:   13 ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 309
            A+GLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPD+EILKIVKE+FDFRPGM+++NLDLKRGGNGRFLKTAAYGHFGR+DPDFTWEVVKPLKW+K QA
Sbjct:  295 ASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILKIVKENFDFRPGMISVNLDLKRGGNGRFLKTAAYGHFGREDPDFTWEVVKPLKWDKVQA 393          
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK1_CATRO (S-adenosylmethionine synthetase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 8.597e-49
Identity = 91/96 (94.79%), Postives = 95/96 (98.96%), Query Frame = 1
Query:   13 ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 300
            ANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGM+ INLDLKRGG+GRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK
Sbjct:  295 ANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGSGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 390          
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK_DENCR (S-adenosylmethionine synthetase OS=Dendrobium crumenatum GN=SAMS PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.466e-48
Identity = 93/101 (92.08%), Postives = 98/101 (97.03%), Query Frame = 1
Query:    7 VRANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 309
            V ANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGM+TINLDLKRGGN RF+KTAAYGHFGRDDPDFTWEVVKPLKW+KP A
Sbjct:  296 VVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGN-RFIKTAAYGHFGRDDPDFTWEVVKPLKWDKPAA 395          
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK2_BETVU (S-adenosylmethionine synthetase 2 OS=Beta vulgaris GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 3.267e-48
Identity = 91/96 (94.79%), Postives = 94/96 (97.92%), Query Frame = 1
Query:   13 ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 300
            ANGLARR IVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGMM+INLDLKRGGNGRF KTAAYGHFGRDDPDFTWEVVKPLKWEK
Sbjct:  295 ANGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMMSINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWEVVKPLKWEK 390          
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK1_PETCR (S-adenosylmethionine synthetase 1 (Fragment) OS=Petroselinum crispum GN=SMS-1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.267e-48
Identity = 89/96 (92.71%), Postives = 96/96 (100.00%), Query Frame = 1
Query:   13 ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 300
            A+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPD+EILKIVKE+FDFRPGM++INLDLKRGGNGRFLKTAAYGHFGR+DPDFTWEVVKPLKWEK
Sbjct:  138 ASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGREDPDFTWEVVKPLKWEK 233          
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK2_PETCR (S-adenosylmethionine synthetase 2 (Fragment) OS=Petroselinum crispum GN=SMS-2 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 5.572e-48
Identity = 89/96 (92.71%), Postives = 96/96 (100.00%), Query Frame = 1
Query:   13 ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 300
            A+GLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL+IVKE+FDFRPGM++INLDLKRGGNGRFLKTAAYGHFGR+DPDFTWEVVKPLKWEK
Sbjct:   49 ASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGREDPDFTWEVVKPLKWEK 144          
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK_GOSHI (S-adenosylmethionine synthetase OS=Gossypium hirsutum GN=SAMS PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.621e-47
Identity = 89/99 (89.90%), Postives = 94/99 (94.95%), Query Frame = 1
Query:   13 ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 309
            ANGLARRC+VQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGRDD DFTWEVVKPLKW+K  A
Sbjct:  295 ANGLARRCVVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGRDDTDFTWEVVKPLKWDKVHA 393          
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK4_VITVI (S-adenosylmethionine synthetase 4 OS=Vitis vinifera GN=METK4 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.766e-47
Identity = 91/98 (92.86%), Postives = 94/98 (95.92%), Query Frame = 1
Query:   13 ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 306
            A+GLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDKEILKIVKESFDFRPGM+ INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK EK Q
Sbjct:  295 ASGLARRCIVQVSYAIGVPEPLSVFVDTYATGKIPDKEILKIVKESFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKAEKAQ 392          
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.766e-47
Identity = 90/98 (91.84%), Postives = 94/98 (95.92%), Query Frame = 1
Query:   13 ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 306
            A+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEIL IVKE FDFRPGM+ I+LDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK EKPQ
Sbjct:  295 ASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILNIVKEKFDFRPGMIAISLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKSEKPQ 392          
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK5_POPTR (S-adenosylmethionine synthetase 5 OS=Populus trichocarpa GN=METK5 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 3.612e-47
Identity = 88/95 (92.63%), Postives = 94/95 (98.95%), Query Frame = 1
Query:   13 ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWE 297
            A+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEIL+IVKESFDFRPGM++INLDLKRGGN RFLKTAAYGHFGRDDPDFTWEVVKPLKW+
Sbjct:  296 ASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKESFDFRPGMISINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKPLKWD 390          
The following BLAST results are available for this feature:
BLAST of EY665218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LITCN8.597e-4990.91S-adenosylmethionine synthetase OS=Litchi chinensi... [more]
METK1_CATRO8.597e-4994.79S-adenosylmethionine synthetase 1 OS=Catharanthus ... [more]
METK_DENCR1.466e-4892.08S-adenosylmethionine synthetase OS=Dendrobium crum... [more]
METK2_BETVU3.267e-4894.79S-adenosylmethionine synthetase 2 OS=Beta vulgaris... [more]
METK1_PETCR4.267e-4892.71S-adenosylmethionine synthetase 1 (Fragment) OS=Pe... [more]
METK2_PETCR5.572e-4892.71S-adenosylmethionine synthetase 2 (Fragment) OS=Pe... [more]
METK_GOSHI1.621e-4789.90S-adenosylmethionine synthetase OS=Gossypium hirsu... [more]
METK4_VITVI2.766e-4792.86S-adenosylmethionine synthetase 4 OS=Vitis vinifer... [more]
METK2_POPTR2.766e-4791.84S-adenosylmethionine synthetase 2 OS=Populus trich... [more]
METK5_POPTR3.612e-4792.63S-adenosylmethionine synthetase 5 OS=Populus trich... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-D05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665218 ID=EY665218; Name=EY665218; organism=Citrus sinensis; type=EST; length=1045bp
CCACGCGTCCGTGCAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTC
CTATGCCATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATG
GAACCGGCAAGATTCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGC
TTTGATTTCAGGCCAGGAATGATGACCATCAATTTGGATCTCAAAAGGGG
CGGTAATGGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGG
ATGACCCAGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAG
CCTCAAGCTTAAATTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTCAA
GTTTGCTTCTATTGGTAGTGGATGAATAATTTGAATATTATCTTGCTGCT
GCTTTGTAATACTAAGCAAATCTCCTGTGTTCAGAACTCATACATGTTCC
CCATTCAATTTCCTTTCCTTTTTCTTTCTTTCCCCACTTCTTTTTTTGGT
TTTGGTTTAATGTACCATGTCCCCACTGTTGTGTAGTGATAATCAATTGA
AAATTTTGCTCAACTGGGTGCCTGGAATTTATAAAAATTCTTCCCTTTTG
GCTTCCAACATATTTTTTGGAAAAGGAAAAATGGAAGGCAACCAGCCGAT
TGGTATTATATTTTGAAACTTTTTGGCCAAAAGCCCAATATTTGGGTTTT
GGCTTAATTAAAAATTAACCACACATGGTGGTGGGGCGGGTTGGGCCCAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGCCGCGCTC
AAAAGAAGAATCCAAAAATTAAAATAACAGGTAGGCACGGGCAACTTACA
CTAACCACCTCTCAAATAAGTGGACCACAAAATGCTATTATATCACAAGG
GGGCCAAACCATTTATTAATAAAGGAAATTGGAGAAAAGGGGAAAAAAAA
AACCCTGAGGGGGAGATAACCACACACAACATAAAACACTCGCCCTTTGT
GAAGCAACACACATCTAATACACCCCCCCCTTAAACCACCGCGGC
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