CX673402

Overview
NameCX673402
Unique NameCX673402
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT2_PASMU (Transketolase 2 OS=Pasteurella multocida GN=tktB PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.444e-55
Identity = 99/159 (62.26%), Postives = 127/159 (79.87%), Query Frame = 2
Query:  332 NTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            N IRFL++DAV+KA SGHPG PMG A +  +L+ + +++NP NP+W +RDRF+LS GHG ML Y+LLHL+GYD +  +DLK FRQ  SKTPGHPE    PG+E TTGPLGQG+ NAVG A+AEK LA ++N+P ++IVDH+TYV LGDGC MEGI++EA
Sbjct:    9 NAIRFLSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPSNPHWADRDRFILSNGHGSMLIYSLLHLSGYD-LSIEDLKQFRQLHSKTPGHPEYGYAPGVETTTGPLGQGITNAVGFAIAEKTLAHQFNRPGHEIVDHHTYVFLGDGCLMEGISHEA 166          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT1_PASMU (Transketolase 1 OS=Pasteurella multocida GN=tktA PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.444e-55
Identity = 99/159 (62.26%), Postives = 127/159 (79.87%), Query Frame = 2
Query:  332 NTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            N IRFL++DAV+KA SGHPG PMG A +  +L+ + +++NP NP+W +RDRF+LS GHG ML Y+LLHL+GYD +  +DLK FRQ  SKTPGHPE    PG+E TTGPLGQG+ NAVG A+AEK LA ++N+P ++IVDH+TYV LGDGC MEGI++EA
Sbjct:    9 NAIRFLSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPSNPHWADRDRFILSNGHGSMLIYSLLHLSGYD-LSIEDLKQFRQLHSKTPGHPEYGYAPGVETTTGPLGQGITNAVGFAIAEKTLAHQFNRPGHEIVDHHTYVFLGDGCLMEGISHEA 166          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT_TREPA (Transketolase OS=Treponema pallidum GN=tkt PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 7.110e-55
Identity = 99/158 (62.66%), Postives = 126/158 (79.75%), Query Frame = 2
Query:  335 TIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            +IR L +DA+E+ANSGHPGLP+G A +   LY  ++++NP NP WFNRDRFVLSAGHG ML YA LHL+GYD V  +D+KNFRQ GS+ PGHPE   TPG+E TTGPLGQG++ AVG ALAE  LAAR+N  ++ +VDH+TY ++G+GC MEG+A+EA
Sbjct:   12 SIRSLTIDAIERANSGHPGLPLGAAELAACLYGTILKHNPANPSWFNRDRFVLSAGHGSMLLYAALHLSGYD-VSLEDIKNFRQVGSRCPGHPEYGCTPGVEATTGPLGQGISMAVGFALAEAMLAARFNTDEHAVVDHHTYALVGEGCLMEGVASEA 168          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT_PICST (Transketolase OS=Pichia stipitis GN=TKT PE=3 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 7.110e-55
Identity = 104/163 (63.80%), Postives = 123/163 (75.46%), Query Frame = 2
Query:  320 EKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            +K+++TIR LAVDAV  ANSGHPG P+G AP  H ++ + MR+NPK+  W NRDRFVLS GH C L Y++L L GYD   ED LK FRQ GSKTPGHPEN + PG EVTTGPLGQG+ N VG+ALA+   AA YNKPD  I D YTYV LGDGC MEG+++EA
Sbjct:    6 QKAISTIRLLAVDAVAAANSGHPGAPLGLAPAAHAVFKK-MRFNPKDTKWINRDRFVLSNGHACALLYSMLVLYGYDLTVED-LKKFRQLGSKTPGHPENTDVPGAEVTTGPLGQGICNGVGIALAQAQFAATYNKPDFPISDSYTYVFLGDGCLMEGVSSEA 166          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT1_YEAST (Transketolase 1 OS=Saccharomyces cerevisiae GN=TKL1 PE=1 SV=4)

HSP 1 Score: 213.772 bits (543), Expect = 9.286e-55
Identity = 104/161 (64.60%), Postives = 126/161 (78.26%), Query Frame = 2
Query:  326 SVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            +V+TIR LAVD V KANSGHPG P+G AP  H+L+ + MR NP NP W NRDRFVLS GH   L Y++LHL GYD +  +DLK FRQ GS+TPGHPE FE PG+EVTTGPLGQG++NAVG+A+A+ +LAA YNKP   + D+YTYV LGDGC  EGI++EA
Sbjct:   11 AVSTIRILAVDTVSKANSGHPGAPLGMAPAAHVLWSQ-MRMNPTNPDWINRDRFVLSNGHAVALLYSMLHLTGYD-LSIEDLKQFRQLGSRTPGHPE-FELPGVEVTTGPLGQGISNAVGMAMAQANLAATYNKPGFTLSDNYTYVFLGDGCLQEGISSEA 168          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT2_VIBVY (Transketolase 2 OS=Vibrio vulnificus (strain YJ016) GN=tkt2 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.584e-54
Identity = 102/159 (64.15%), Postives = 125/159 (78.62%), Query Frame = 2
Query:  332 NTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            N IR L++D V+KANSGHPG PMG A +  +L+   + +NP NP W +RDRFVLS GHG ML Y+LLHL+GY+ +  DDLKNFRQ  SKTPGHPE    PGIE TTGPLGQG+ NAVG+A+AEK LAA++NK  +DIVDH+TYV +GDGC MEGI++EA
Sbjct:    8 NAIRALSMDGVQKANSGHPGAPMGMADIAEVLWRGHLNHNPSNPEWADRDRFVLSNGHGSMLIYSLLHLSGYE-LSIDDLKNFRQLHSKTPGHPEYGYAPGIETTTGPLGQGITNAVGMAMAEKALAAQFNKEGHDIVDHFTYVFMGDGCLMEGISHEA 165          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT2_VIBVU (Transketolase 2 OS=Vibrio vulnificus GN=tkt2 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.584e-54
Identity = 102/159 (64.15%), Postives = 125/159 (78.62%), Query Frame = 2
Query:  332 NTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            N IR L++D V+KANSGHPG PMG A +  +L+   + +NP NP W +RDRFVLS GHG ML Y+LLHL+GY+ +  DDLKNFRQ  SKTPGHPE    PGIE TTGPLGQG+ NAVG+A+AEK LAA++NK  +DIVDH+TYV +GDGC MEGI++EA
Sbjct:    8 NAIRALSMDGVQKANSGHPGAPMGMADIAEVLWRGHLNHNPSNPEWADRDRFVLSNGHGSMLIYSLLHLSGYE-LSIDDLKNFRQLHSKTPGHPEYGYAPGIETTTGPLGQGITNAVGMAMAEKALAAQFNKEGHDIVDHFTYVFMGDGCLMEGISHEA 165          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT1_VIBVY (Transketolase 1 OS=Vibrio vulnificus (strain YJ016) GN=tkt1 PE=3 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 1.584e-54
Identity = 102/159 (64.15%), Postives = 125/159 (78.62%), Query Frame = 2
Query:  332 NTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            N IR L++D V+KANSGHPG PMG A +  +L+   + +NP NP W +RDRFVLS GHG ML Y+LLHL+GY+ +  DDLKNFRQ  SKTPGHPE    PGIE TTGPLGQG+ NAVG+A+AEK LAA++NK  +DIVDH+TYV +GDGC MEGI++EA
Sbjct:    9 NAIRALSMDGVQKANSGHPGAPMGMADIAEVLWRGHLNHNPSNPEWADRDRFVLSNGHGSMLIYSLLHLSGYE-LSIDDLKNFRQLHSKTPGHPEYGYAPGIETTTGPLGQGITNAVGMAMAEKALAAQFNKEGHDIVDHFTYVFMGDGCLMEGISHEA 166          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKTC_RALEH (Transketolase, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbTC PE=3 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 2.069e-54
Identity = 103/162 (63.58%), Postives = 123/162 (75.93%), Query Frame = 2
Query:  323 KSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            +  N +RFLA DAVE+A SGHPG PMG A M  +L+   +R+NP NP W +RDRFVLS GH  MLQYALLHL GYD +    L+ FRQ  + TPGHPE   TPG+E TTGPLGQG+ANAVG+ALAEK LAA +N+P  DIVDH+TYV LGDGC MEG+++EA
Sbjct:   12 RCANALRFLAADAVEQAKSGHPGAPMGMAEMAEVLWRRHLRHNPANPAWPDRDRFVLSNGHASMLQYALLHLTGYD-LPMSQLRQFRQLHAATPGHPELGVTPGVETTTGPLGQGLANAVGMALAEKLLAATFNRPGFDIVDHHTYVFLGDGCLMEGLSHEA 172          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT2_VIBPA (Transketolase 2 OS=Vibrio parahaemolyticus GN=tkt2 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.702e-54
Identity = 101/159 (63.52%), Postives = 125/159 (78.62%), Query Frame = 2
Query:  332 NTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            N IR L++D V++ANSGHPG PMG A +  +L+   + +NP NP W +RDRFVLS GHG ML Y+LLHL+GY+ +  DDLKNFRQ  SKTPGHPE    PGIE TTGPLGQG+ NAVG+A+AEK LAA++NK  +DIVDH+TYV +GDGC MEGI++EA
Sbjct:    8 NAIRALSMDGVQQANSGHPGAPMGMADIAEVLWRSHLNHNPSNPEWADRDRFVLSNGHGSMLIYSLLHLSGYE-LSIDDLKNFRQLHSKTPGHPEYGYAPGIETTTGPLGQGITNAVGMAMAEKALAAQFNKEGHDIVDHFTYVFMGDGCLMEGISHEA 165          
The following BLAST results are available for this feature:
BLAST of CX673402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
TKT2_PASMU5.444e-5562.26Transketolase 2 OS=Pasteurella multocida GN=tktB P... [more]
TKT1_PASMU5.444e-5562.26Transketolase 1 OS=Pasteurella multocida GN=tktA P... [more]
TKT_TREPA7.110e-5562.66Transketolase OS=Treponema pallidum GN=tkt PE=3 SV... [more]
TKT_PICST7.110e-5563.80Transketolase OS=Pichia stipitis GN=TKT PE=3 SV=2[more]
TKT1_YEAST9.286e-5564.60Transketolase 1 OS=Saccharomyces cerevisiae GN=TKL... [more]
TKT2_VIBVY1.584e-5464.15Transketolase 2 OS=Vibrio vulnificus (strain YJ016... [more]
TKT2_VIBVU1.584e-5464.15Transketolase 2 OS=Vibrio vulnificus GN=tkt2 PE=3 ... [more]
TKT1_VIBVY1.584e-5464.15Transketolase 1 OS=Vibrio vulnificus (strain YJ016... [more]
TKTC_RALEH2.069e-5463.58Transketolase, chromosomal OS=Ralstonia eutropha (... [more]
TKT2_VIBPA2.702e-5463.52Transketolase 2 OS=Vibrio parahaemolyticus GN=tkt2... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_22D12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-22D12-H24-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX673402 ID=CX673402; Name=CX673402; organism=Citrus sinensis; type=EST; length=808bp
CAGAAGGCGAGCTCAACCTCTCTCTCTCTCTCTCTCTCTCTCTCAAAACA
AAACAATGGCTTCTTCATCTTCTTTCACTCTATCCCAAGCCCTTCTGACC
AGAGGCACTTCTCACCATGGCTTCACTCAATCATCAGAGCACCATCGTCT
CGCTCTCTCTACACTCTCTCTCCCTTCCTTTTCCGGCCTCAAATCCACCT
CCTCTTCCACCCTACGCACCCCCACCTCCCGCCGCCGCCTCTCCACCAGC
CAAGCCAGCCGACCCATCCGCGCAGCGGCCGTAGAAACACTCGAAACCTC
GACTGATGCCGCTTTGGTTGAGAAATCAGTCAACACCATTAGATTCTTGG
CTGTCGACGCCGTCGAGAAGGCCAATTCGGGTCACCCGGGATTGCCCATG
GGATGTGCTCCTATGGGTCATATTTTGTATGATGAGGTCATGAGATACAA
CCCCAAAAACCCCTACTGGTTTAACCGTGACCGCTTCGTTTTGTCCGCCG
GACATGGCTGCATGTTGCAGTACGCTCTCCTTCACCTTGCTGGTTACGAC
AGTGTCCAGGAAGACGACTTGAAGAATTTCAGACAATGGGGAAGCAAAAC
ACCTGGACACCCAGAAAACTTTGAGACACCTGGTATCGAGGTCACAACTG
GTCCTCTTGGCCAGGGTATGGCGAATGCTGTTGGTTTGGCTCTTGCAGAG
AAGCATTTGGCTGCTCGATACAACAAGCCTGACAATGATATTGTTGACCA
CTACACATATGTGATACTGGGAGATGGGTGCCAAATGGAGGGGATTGCAA
ATGAGGCT
back to top