CX673402

Overview
NameCX673402
Unique NameCX673402
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT1_VIBPA (Transketolase 1 OS=Vibrio parahaemolyticus GN=tkt1 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.702e-54
Identity = 101/159 (63.52%), Postives = 125/159 (78.62%), Query Frame = 2
Query:  332 NTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            N IR L++D V++ANSGHPG PMG A +  +L+   + +NP NP W +RDRFVLS GHG ML Y+LLHL+GY+ +  DDLKNFRQ  SKTPGHPE    PGIE TTGPLGQG+ NAVG+ALAEK LAA++NK  +DI+DH+TYV +GDGC MEGI++EA
Sbjct:    9 NAIRALSMDGVQQANSGHPGAPMGMADIAEVLWRSHLNHNPANPEWADRDRFVLSNGHGSMLIYSLLHLSGYE-LSIDDLKNFRQLHSKTPGHPEYGYAPGIETTTGPLGQGITNAVGMALAEKALAAQFNKEGHDIIDHFTYVFMGDGCLMEGISHEA 166          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT_STAES (Transketolase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=tkt PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.529e-54
Identity = 99/161 (61.49%), Postives = 129/161 (80.12%), Query Frame = 2
Query:  326 SVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            +++TIR L++DA+EKANSGHPGLPMG APM + L+   + +NP++  +FNRDRF+LSAGHG  L Y+LLH++G  S++ ++LK FRQWGSKTPGHPE   T G+EVTTGPLGQG A +VG+ALAE HLA ++NK   DIV+HYTYV+  DG  MEGI++EA
Sbjct:    9 AIDTIRALSIDAIEKANSGHPGLPMGAAPMAYTLWTRHLNFNPQSKDFFNRDRFILSAGHGSALLYSLLHVSG--SLELEELKQFRQWGSKTPGHPEYRHTDGVEVTTGPLGQGFAMSVGMALAESHLAGKFNKDQFDIVNHYTYVLASDGDLMEGISHEA 167          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT_STAEQ (Transketolase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=tkt PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.529e-54
Identity = 99/161 (61.49%), Postives = 129/161 (80.12%), Query Frame = 2
Query:  326 SVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            +++TIR L++DA+EKANSGHPGLPMG APM + L+   + +NP++  +FNRDRF+LSAGHG  L Y+LLH++G  S++ ++LK FRQWGSKTPGHPE   T G+EVTTGPLGQG A +VG+ALAE HLA ++NK   DIV+HYTYV+  DG  MEGI++EA
Sbjct:    9 AIDTIRALSIDAIEKANSGHPGLPMGAAPMAYTLWTRHLNFNPQSKDFFNRDRFILSAGHGSALLYSLLHVSG--SLELEELKQFRQWGSKTPGHPEYRHTDGVEVTTGPLGQGFAMSVGMALAESHLAGKFNKDQFDIVNHYTYVLASDGDLMEGISHEA 167          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT_STAAW (Transketolase OS=Staphylococcus aureus (strain MW2) GN=tkt PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.861e-54
Identity = 99/161 (61.49%), Postives = 128/161 (79.50%), Query Frame = 2
Query:  326 SVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            +V+T+R L++D +EKANSGHPGLPMG APM + L+   + +NP++  +FNRDRFVLSAGHG  L Y+LLH++G  S++ ++LK FRQWGSKTPGHPE   T G+EVTTGPLGQG A +VGLALAE HLA ++NK   ++VDHYTYV+  DG  MEGI++EA
Sbjct:    9 AVDTLRALSIDTIEKANSGHPGLPMGAAPMAYTLWTRHLNFNPQSKDYFNRDRFVLSAGHGSALLYSLLHVSG--SLELEELKQFRQWGSKTPGHPEYRHTDGVEVTTGPLGQGFAMSVGLALAEDHLAGKFNKEGYNVVDHYTYVLASDGDLMEGISHEA 167          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT_STAAS (Transketolase OS=Staphylococcus aureus (strain MSSA476) GN=tkt PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.861e-54
Identity = 99/161 (61.49%), Postives = 128/161 (79.50%), Query Frame = 2
Query:  326 SVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            +V+T+R L++D +EKANSGHPGLPMG APM + L+   + +NP++  +FNRDRFVLSAGHG  L Y+LLH++G  S++ ++LK FRQWGSKTPGHPE   T G+EVTTGPLGQG A +VGLALAE HLA ++NK   ++VDHYTYV+  DG  MEGI++EA
Sbjct:    9 AVDTLRALSIDTIEKANSGHPGLPMGAAPMAYTLWTRHLNFNPQSKDYFNRDRFVLSAGHGSALLYSLLHVSG--SLELEELKQFRQWGSKTPGHPEYRHTDGVEVTTGPLGQGFAMSVGLALAEDHLAGKFNKEGYNVVDHYTYVLASDGDLMEGISHEA 167          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT_STAAN (Transketolase OS=Staphylococcus aureus (strain N315) GN=tkt PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.861e-54
Identity = 99/161 (61.49%), Postives = 128/161 (79.50%), Query Frame = 2
Query:  326 SVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            +V+T+R L++D +EKANSGHPGLPMG APM + L+   + +NP++  +FNRDRFVLSAGHG  L Y+LLH++G  S++ ++LK FRQWGSKTPGHPE   T G+EVTTGPLGQG A +VGLALAE HLA ++NK   ++VDHYTYV+  DG  MEGI++EA
Sbjct:    9 AVDTLRALSIDTIEKANSGHPGLPMGAAPMAYTLWTRHLNFNPQSKDYFNRDRFVLSAGHGSALLYSLLHVSG--SLELEELKQFRQWGSKTPGHPEYRHTDGVEVTTGPLGQGFAMSVGLALAEDHLAGKFNKEGYNVVDHYTYVLASDGDLMEGISHEA 167          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT_STAAM (Transketolase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=tkt PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.861e-54
Identity = 99/161 (61.49%), Postives = 128/161 (79.50%), Query Frame = 2
Query:  326 SVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            +V+T+R L++D +EKANSGHPGLPMG APM + L+   + +NP++  +FNRDRFVLSAGHG  L Y+LLH++G  S++ ++LK FRQWGSKTPGHPE   T G+EVTTGPLGQG A +VGLALAE HLA ++NK   ++VDHYTYV+  DG  MEGI++EA
Sbjct:    9 AVDTLRALSIDTIEKANSGHPGLPMGAAPMAYTLWTRHLNFNPQSKDYFNRDRFVLSAGHGSALLYSLLHVSG--SLELEELKQFRQWGSKTPGHPEYRHTDGVEVTTGPLGQGFAMSVGLALAEDHLAGKFNKEGYNVVDHYTYVLASDGDLMEGISHEA 167          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT_STAAC (Transketolase OS=Staphylococcus aureus (strain COL) GN=tkt PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.861e-54
Identity = 99/161 (61.49%), Postives = 128/161 (79.50%), Query Frame = 2
Query:  326 SVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            +V+T+R L++D +EKANSGHPGLPMG APM + L+   + +NP++  +FNRDRFVLSAGHG  L Y+LLH++G  S++ ++LK FRQWGSKTPGHPE   T G+EVTTGPLGQG A +VGLALAE HLA ++NK   ++VDHYTYV+  DG  MEGI++EA
Sbjct:    9 AVDTLRALSIDTIEKANSGHPGLPMGAAPMAYTLWTRHLNFNPQSKDYFNRDRFVLSAGHGSALLYSLLHVSG--SLELEELKQFRQWGSKTPGHPEYRHTDGVEVTTGPLGQGFAMSVGLALAEDHLAGKFNKEGYNVVDHYTYVLASDGDLMEGISHEA 167          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKTP_RALEH (Transketolase, plasmid OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbTP PE=3 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.341e-53
Identity = 102/162 (62.96%), Postives = 122/162 (75.31%), Query Frame = 2
Query:  323 KSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            +  N +RFLA DAVE A SGHPG PMG A M  +++   +R+NP NP W +RDRFVLS GH  MLQYALLHL GYD +    L+ FRQ  + TPGHPE   TPG+E TTGPLGQG+ANAVG+ALAEK LAA +N+P  DIVDH+TYV LGDGC MEG+++EA
Sbjct:   12 RCANALRFLAADAVELARSGHPGAPMGMAEMAEVVWRRHLRHNPANPAWPDRDRFVLSNGHASMLQYALLHLTGYD-LPMSQLRQFRQLHAVTPGHPEVDVTPGVETTTGPLGQGLANAVGMALAEKLLAATFNRPGFDIVDHHTYVFLGDGCLMEGLSHEA 172          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT_STAAR (Transketolase OS=Staphylococcus aureus (strain MRSA252) GN=tkt PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.751e-53
Identity = 98/161 (60.87%), Postives = 128/161 (79.50%), Query Frame = 2
Query:  326 SVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            +V+T+R L++D +EKANSGHPGLPMG APM + L+   + +NP++  +FNRDRFVLSAGHG  L Y+LLH++G  S++ ++LK FRQWGSKTPGHPE   T G+EVTTGPLGQG + +VGLALAE HLA ++NK   ++VDHYTYV+  DG  MEGI++EA
Sbjct:    9 AVDTLRALSIDTIEKANSGHPGLPMGAAPMAYTLWTRHLNFNPQSKDYFNRDRFVLSAGHGSALLYSLLHVSG--SLELEELKQFRQWGSKTPGHPEYRHTDGVEVTTGPLGQGFSMSVGLALAEDHLAGKFNKEGYNVVDHYTYVLASDGDLMEGISHEA 167          
The following BLAST results are available for this feature:
BLAST of CX673402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
TKT1_VIBPA2.702e-5463.52Transketolase 1 OS=Vibrio parahaemolyticus GN=tkt1... [more]
TKT_STAES3.529e-5461.49Transketolase OS=Staphylococcus epidermidis (strai... [more]
TKT_STAEQ3.529e-5461.49Transketolase OS=Staphylococcus epidermidis (strai... [more]
TKT_STAAW7.861e-5461.49Transketolase OS=Staphylococcus aureus (strain MW2... [more]
TKT_STAAS7.861e-5461.49Transketolase OS=Staphylococcus aureus (strain MSS... [more]
TKT_STAAN7.861e-5461.49Transketolase OS=Staphylococcus aureus (strain N31... [more]
TKT_STAAM7.861e-5461.49Transketolase OS=Staphylococcus aureus (strain Mu5... [more]
TKT_STAAC7.861e-5461.49Transketolase OS=Staphylococcus aureus (strain COL... [more]
TKTP_RALEH1.341e-5362.96Transketolase, plasmid OS=Ralstonia eutropha (stra... [more]
TKT_STAAR1.751e-5360.87Transketolase OS=Staphylococcus aureus (strain MRS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_22D12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-22D12-H24-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX673402 ID=CX673402; Name=CX673402; organism=Citrus sinensis; type=EST; length=808bp
CAGAAGGCGAGCTCAACCTCTCTCTCTCTCTCTCTCTCTCTCTCAAAACA
AAACAATGGCTTCTTCATCTTCTTTCACTCTATCCCAAGCCCTTCTGACC
AGAGGCACTTCTCACCATGGCTTCACTCAATCATCAGAGCACCATCGTCT
CGCTCTCTCTACACTCTCTCTCCCTTCCTTTTCCGGCCTCAAATCCACCT
CCTCTTCCACCCTACGCACCCCCACCTCCCGCCGCCGCCTCTCCACCAGC
CAAGCCAGCCGACCCATCCGCGCAGCGGCCGTAGAAACACTCGAAACCTC
GACTGATGCCGCTTTGGTTGAGAAATCAGTCAACACCATTAGATTCTTGG
CTGTCGACGCCGTCGAGAAGGCCAATTCGGGTCACCCGGGATTGCCCATG
GGATGTGCTCCTATGGGTCATATTTTGTATGATGAGGTCATGAGATACAA
CCCCAAAAACCCCTACTGGTTTAACCGTGACCGCTTCGTTTTGTCCGCCG
GACATGGCTGCATGTTGCAGTACGCTCTCCTTCACCTTGCTGGTTACGAC
AGTGTCCAGGAAGACGACTTGAAGAATTTCAGACAATGGGGAAGCAAAAC
ACCTGGACACCCAGAAAACTTTGAGACACCTGGTATCGAGGTCACAACTG
GTCCTCTTGGCCAGGGTATGGCGAATGCTGTTGGTTTGGCTCTTGCAGAG
AAGCATTTGGCTGCTCGATACAACAAGCCTGACAATGATATTGTTGACCA
CTACACATATGTGATACTGGGAGATGGGTGCCAAATGGAGGGGATTGCAA
ATGAGGCT
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