CX673387

Overview
NameCX673387
Unique NameCX673387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX673387 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.453e-27
Identity = 79/222 (35.59%), Postives = 116/222 (52.25%), Query Frame = -2
Query:  211 EFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 876
            EF+AT LF++  + + +  + S        +  IA AFG  I  LV     +SG HINPAVT   L+   +S  RA FY+  Q LGAV GA ++   E +    R     N + +  T G  +  E+  T  LV  +F++TD +R            L IGF+V L HL  I  TG  +NPARSL  A++  K   +DDHW+FW+GP +GA + ++ +  ++
Sbjct:   16 EFLATLLFVFFGLGSALQWASSPPS-----VLQIAVAFGLGIGILVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAIL--HEITPVEIRGDLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRGDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAIIGSLLYNYLL 223          
BLAST of CX673387 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.204e-27
Identity = 79/227 (34.80%), Postives = 119/227 (52.42%), Query Frame = -2
Query:  211 EFMATFLFLYITVLTVMGVSKSNTKCSTV----GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 876
            EF+AT +F++    +V+ + K     ST+    G+  +A A    +   V     +SGGH+NPAVTFG L+  ++SL RAV Y   Q LGAV    +++   G     R  G A  +A G   G  +  E + TF  VY  + +  D KR     H+  +APL +GF +    LA  P  G G+NPAR  G A++      W  HW++W+GPF+GA LA + ++ ++
Sbjct:   33 EFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGG---ARPPGFA--LASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKR----GHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV---GWRWRHHWVYWLGPFLGAGLAGLVYEYLL 247          
BLAST of CX673387 vs. ExPASy Swiss-Prot
Match: AQPZ_GLOVI (Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.204e-27
Identity = 70/196 (35.71%), Postives = 106/196 (54.08%), Query Frame = -2
Query:  223 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAH------GYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYH 792
            +G  G++ AFG  +  + +    ISG HINPAV+ GL  A++   T  + Y+  Q LG + GAGV+    G K    L GG     +      GYT    L  E++ TF+ +  +  +TD +           AP+ IG ++ L+HL +IP+T T +NPARS G A +F  D A  + W+FW+ P +GAALA +++
Sbjct:   36 IGFAGVSLAFGLTLLTMAFAIGHISGCHINPAVSIGLWAAKRFPATELLPYIAAQVLGGIAGAGVLYLIAGGKAGFSLSGGFASNGYGLHSPGGYTLLACLVCEVVMTFMFLMIILGSTDRRAPKG------FAPIAIGLSLTLIHLISIPVTNTSVNPARSTGPA-LFVGDWAIAELWLFWLAPIVGAALAGLFY 224          
BLAST of CX673387 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.204e-27
Identity = 71/193 (36.79%), Postives = 101/193 (52.33%), Query Frame = -2
Query:  229 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGAN-----VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAV 792
            +G  G+A AFG  +  + Y   GISGGH NPAV+ GL +A +L     + Y V Q LGA+  A ++      K+    GG A+     +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G A +F    A    W+FWV P +GA + A+
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVA-LFADRAALSQLWLFWVAPLVGAVIGAI 219          
BLAST of CX673387 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.204e-27
Identity = 71/193 (36.79%), Postives = 101/193 (52.33%), Query Frame = -2
Query:  229 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGAN-----VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAV 792
            +G  G+A AFG  +  + Y   GISGGH NPAV+ GL +A +L     + Y V Q LGA+  A ++      K+    GG A+     +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G A +F    A    W+FWV P +GA + A+
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVA-LFADRAALSQLWLFWVAPLVGAVIGAI 219          
BLAST of CX673387 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.185e-27
Identity = 71/189 (37.57%), Postives = 101/189 (53.44%), Query Frame = -2
Query:  211 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 777
            IA AFG ++  +V     +SG HINPAVTF  L+  ++SL RA+FY+  Q LGAV GA V+ G   +     L    N +  G + G     EI  T   V  +F+  D +RN R   V     L IGF++ L HL  +  TG  +NPARS   A++      + +HW++WVGP IG AL  + +  ++
Sbjct:   44 IALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNL--ALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----SLAIGFSLTLGHLFGLYYTGASMNPARSFAPAVLTRN---FTNHWVYWVGPIIGGALGGLVYDFIL 223          
BLAST of CX673387 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.185e-27
Identity = 71/193 (36.79%), Postives = 101/193 (52.33%), Query Frame = -2
Query:  229 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGAN-----VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAV 792
            +G  G+A AFG  +  + Y   GISGGH NPAV+ GL +A +L     + Y V Q LGA+  A ++      K+    GG A+     +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G A +F    A    W+FWV P +GA + A+
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTWVNPARSTGVA-LFADTAALSQLWLFWVAPLVGAVIGAI 219          
BLAST of CX673387 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.323e-27
Identity = 73/228 (32.02%), Postives = 124/228 (54.39%), Query Frame = -2
Query:  214 EFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLG----AEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 876
            EF++TF+F++    + +  +K  ++   +  G+   + A    +F  V   A ISGGH+NPAVTFG  +   ++L R + Y++ Q LG++  + ++     S          +V A G ++G G+G     EI+ TF LVYTV+ +A D K+     ++ I+AP+ IGF V    L     TG  +NPA S G A++     +W +HW++W GP IG  +A + ++++
Sbjct:   26 EFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTAS----------SVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 236          
BLAST of CX673387 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.218e-26
Identity = 80/226 (35.40%), Postives = 121/226 (53.54%), Query Frame = -2
Query:  214 EFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEG--SKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 876
            EF++T +F++  V + +  +K          G+  +A   G  +F  V   A ISGGH+NPAVTFGL L  ++++   VFY + Q LGA+ GA +V+   G  +  +   G GA          +G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    L   P +G  +NPARS G A+       + + WI+WVGP +G  LA + ++ V
Sbjct:   25 EFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHGLSGVGA---------FEGVVMEIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGD---YTNIWIYWVGPLVGGGLAGLVYRYV 234          
BLAST of CX673387 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.218e-26
Identity = 75/224 (33.48%), Postives = 117/224 (52.23%), Query Frame = -2
Query:  214 EFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 876
            EF +  +F++    + M   K   +   +  G+   + +    +F  V   A +SGGH+NPAVTFG  +   ++L RA+ Y + Q LGAV    ++K   G      +   A  +++G T  + +  EI+ TF LVYTV+ +A D K+      + I+APL IG  V    L      G  +NPA S G A++      W +HW++WVGPFIGAA+AA+ +  +
Sbjct:   26 EFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGG-----METAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKK----GDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVV---SWIWTNHWVYWVGPFIGAAIAAIVYDTI 237          
The following BLAST results are available for this feature:
BLAST of CX673387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
AQP2_RAT2.453e-2735.59Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
TIP32_MAIZE3.204e-2734.80Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
AQPZ_GLOVI3.204e-2735.71Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 ... [more]
AQPZ_BRUAB3.204e-2736.79Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUA23.204e-2736.79Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
MIP_RANPI4.185e-2737.57Lens fiber major intrinsic protein OS=Rana pipiens... [more]
AQPZ_BRUME4.185e-2736.79Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
TIP1_MEDTR9.323e-2732.02Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP22_ORYSJ1.218e-2635.40Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP13_ARATH1.218e-2633.48Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_22D05_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-22D05-G10-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX673387 ID=CX673387; Name=CX673387; organism=Citrus sinensis; type=EST; length=877bp
TTTTTTTAAAAAATGAATCCTCCAATCAAAAGCTTAAAAAAAAAAAATAC
AGCAATGCTAGATAATTTACACACAATTAAATAACATCTTAAACAGTTAA
ACACCAAATGCACATAAACAAAAAGACACGACAAAGAAGATACAAATTAA
AAAAAAAAAAAGGTCCATCAGTGAACTCTCTTAAGCCCTGGACTTGAAGG
GAATGGCCCTGATGACTATCTGGTGGTACACAGCAGCCAGTGCAGCTCCA
ATGAATGGTCCAACCCAGAAGATCCAATGGTCATCCCAGGCATGGTCTTT
GTTGAAGATGATGGCAGCTCCAAGACTCCTAGCTGGGTTGATGCCAGTTC
CTGTGATGGGGATGGTGGCCAGGTGGACCAAGAAAACAGCAAATCCAATG
GGGAGGGGGGCCAAAATAGGGACATGAGAGTCTCTGGCGTTTCTCTTCGC
ATCAGTGGCAGAGAAGACAGTGTAAACAAGAACAAAGGTTCCAATAATCT
CAGCACCAAGACCATCACCCTTGGTGTAGCCGTGAGCAACAACATTGGCT
CCACCACCCAACCTCTCGTAGTTCTTTGAACCTTCGAATCCCTTGACAAC
ACCAGCACCACAGACAGCACCAAGGCACTGCATGACCATGTAGAAGACAG
CCCTTGTCAGGGAAAGCTTCCTCGCTAGCAGCAGACCGAAGGTCACTGCT
GGGTTGATGTGTCCTCCTGAGATACCAGCAGTGCAGTAAACAAGCGCAAA
GATCATGCCACCAAAGGCCCAAGCAATTCCTTGGATACCGACAGTGGAGC
ACTTGGTGTTAGACTTAGAGACACCCATGACAGTCAAGACAGTGATGTAA
AGGAACAAGAAGGTAGCCATGAACTCT
back to top