EY665205

Overview
NameEY665205
Unique NameEY665205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1035
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665205 vs. ExPASy Swiss-Prot
Match: GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.121e-16
Identity = 41/87 (47.13%), Postives = 54/87 (62.07%), Query Frame = 1
Query:   88 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAA 348
            + DFCV DLK S S  G+PC   + V+A DF +SGLG   +T++     V PA V  FP +N LG+S+  ++LA GGV P H HP A
Sbjct:   33 LQDFCVGDLKASASINGFPC--KSAVSASDFFYSGLGGPLDTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPRA 117          

HSP 2 Score: 30.8018 bits (68), Expect = 1.121e-16
Identity = 13/29 (44.83%), Postives = 19/29 (65.52%), Query Frame = 3
Query:  396 FSSSANTVYVKTLKKGDIMIFPQGLVLFQ 482
            F S+ NT++ K L  G+  + P+GLV FQ
Sbjct:  132 FLSTNNTLFSKVLNAGEAFVIPRGLVHFQ 160          
BLAST of EY665205 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.021e-16
Identity = 38/88 (43.18%), Postives = 55/88 (62.50%), Query Frame = 1
Query:   88 VNDFCVADLKLSDSPA-GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAA 348
            + D+CVA    +     G  C  P +VTA+DF +SGL + GNT++ + A+VT   V + P +N LG+++ARLD A GG +P H HP A
Sbjct:   30 LQDYCVATNGTNRVFVNGKFCKDPKLVTANDFFYSGLNIPGNTSNRLGASVTDVDVRRIPGLNTLGIAIARLDFAPGGQLPPHIHPRA 117          

HSP 2 Score: 31.187 bits (69), Expect = 7.021e-16
Identity = 25/90 (27.78%), Postives = 37/90 (41.11%), Query Frame = 3
Query:  330 PHSSSCFPKSFLLWHGCITAGVFSSSAN--TVYVKTLKKGDIMIFPQGLVLFQVISG----------ADGPPGFVTSTAQIWDSNHRISP 563
            PH      +  L+  G ++ G  SS+    T++ K L  GD+  FP GLV F   +G              PG +     ++ SN  I P
Sbjct:  111 PHIHPRASQIILVLKGQLSVGFVSSNDYNYTLFSKILYPGDVFAFPIGLVQFHANTGKTHAVAIGVVGSQDPGVIPIGDAVFGSNPLIDP 200          
BLAST of EY665205 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.028e-16
Identity = 41/87 (47.13%), Postives = 49/87 (56.32%), Query Frame = 1
Query:   88 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHP 342
            + DFCVA  DLK      G  C  P  V A DF FSGL V GNT + + + VT   V Q P +N +G+SL R+D A  G  P HTHP
Sbjct:   28 LQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHP 113          

HSP 2 Score: 36.5798 bits (83), Expect = 7.028e-16
Identity = 27/94 (28.72%), Postives = 43/94 (45.74%), Query Frame = 3
Query:  318 RNPNPHSSSCFPKSFLLWHGCITAGVFSSSA--NTVYVKTLKKGDIMIFPQGLVLFQVISG----------ADGPPGFVTSTAQIWDSNHRISP 563
            +NP PH+     +  +L  G +  G  SS+   N ++ K L  GD+ +FP G++ FQV  G          +    G +T    ++ SN  I P
Sbjct:  106 QNP-PHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYP 198          
BLAST of EY665205 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.250e-16
Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = 1
Query:   88 VNDFCVADLKLSD--SPA--GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAA 348
            + DFCVA  +     SPA  G+PC P + V +DDF F+GL  AG+T +   A++ P  V  FPA+N LG+++ R+DLA GGV P+H+HP A
Sbjct:   40 IQDFCVAVPRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRA 130          
BLAST of EY665205 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.543e-15
Identity = 41/87 (47.13%), Postives = 49/87 (56.32%), Query Frame = 1
Query:   88 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHP 342
            + DFCVA  DLK      G  C  P  V A DF FSGL V GNT + + + VT   V Q P +N +G+SL R+D A  G  P HTHP
Sbjct:   28 LQDFCVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHP 113          

HSP 2 Score: 35.4242 bits (80), Expect = 1.543e-15
Identity = 26/94 (27.66%), Postives = 43/94 (45.74%), Query Frame = 3
Query:  318 RNPNPHSSSCFPKSFLLWHGCITAGVFSSSA--NTVYVKTLKKGDIMIFPQGLVLFQVISG----------ADGPPGFVTSTAQIWDSNHRISP 563
            +NP PH+     +  +L  G +  G  SS+   N ++ K L  GD+ +FP G++ FQ+  G          +    G +T    ++ SN  I P
Sbjct:  106 QNP-PHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQLNIGKIPAIAFAGLSSQNAGVITIANTVFGSNPPIYP 198          
BLAST of EY665205 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 1.543e-15
Identity = 40/87 (45.98%), Postives = 49/87 (56.32%), Query Frame = 1
Query:   88 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHP 342
            + DFCVA  DLK      G  C  P  V A DF FSGL + GNT + + + VT   V Q P +N +G+SL R+D A  G  P HTHP
Sbjct:   28 LQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHP 113          

HSP 2 Score: 36.5798 bits (83), Expect = 1.543e-15
Identity = 27/94 (28.72%), Postives = 43/94 (45.74%), Query Frame = 3
Query:  318 RNPNPHSSSCFPKSFLLWHGCITAGVFSSSA--NTVYVKTLKKGDIMIFPQGLVLFQVISG----------ADGPPGFVTSTAQIWDSNHRISP 563
            +NP PH+     +  +L  G +  G  SS+   N ++ K L  GD+ +FP G++ FQV  G          +    G +T    ++ SN  I P
Sbjct:  106 QNP-PHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYP 198          
BLAST of EY665205 vs. ExPASy Swiss-Prot
Match: GL11_ORYSJ (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.755e-15
Identity = 46/88 (52.27%), Postives = 54/88 (61.36%), Query Frame = 1
Query:   85 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAA 348
            M+ D CVADL       G+PC   A VTADDF F+GL   GNT +   + VT A V  FP VN LG+S+AR+D A GG  P HTHP A
Sbjct:   29 MLQDVCVADLASPVKLNGFPC--KANVTADDFFFAGLKNPGNTNNPAGSNVTAANVQSFPGVNTLGVSMARIDYAPGGQNPPHTHPRA 114          
BLAST of EY665205 vs. ExPASy Swiss-Prot
Match: GL15_ARATH (Germin-like protein subfamily 1 member 5 OS=Arabidopsis thaliana GN=At3g04190 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.388e-15
Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = 1
Query:   88 VNDFCVADLKLSDSPA-GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHP 342
            + D+CVA  + +     G  C  P  VTA+DF  SGL V GNT++     +T   V + P +N LG+ +AR+D A GG+ P HTHP
Sbjct:   30 LQDYCVATNETNGVYVNGKFCKDPKCVTANDFYTSGLNVPGNTSTGPGVKITVVDVKRMPGLNTLGVDIARIDFAPGGLYPPHTHP 115          

HSP 2 Score: 35.4242 bits (80), Expect = 3.388e-15
Identity = 19/57 (33.33%), Postives = 30/57 (52.63%), Query Frame = 3
Query:  330 PHSSSCFPKSFLLWHGCITAGVFSSSAN--TVYVKTLKKGDIMIFPQGLVLFQVISG 494
            PH+     + FL+  G +  G  SS+    T++ K L  GD+ +FP+GL+ F    G
Sbjct:  111 PHTHPRGSEIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIQFHANIG 167          
BLAST of EY665205 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.598e-15
Identity = 44/87 (50.57%), Postives = 56/87 (64.37%), Query Frame = 1
Query:   88 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAA 348
            + DFCV DLK S S  G+PC   + V+A DF FSGLG   NT++    AV+PA V  FP +N LGLS+  ++ A GGV P H+HP A
Sbjct:   33 LQDFCVGDLKASPSINGFPC--KSSVSASDFFFSGLGGPLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRA 117          
BLAST of EY665205 vs. ExPASy Swiss-Prot
Match: GL23_ARATH (Germin-like protein subfamily 2 member 3 OS=Arabidopsis thaliana GN=GLP8 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.598e-15
Identity = 44/89 (49.44%), Postives = 55/89 (61.80%), Query Frame = 1
Query:   85 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNT-TSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAA 348
            M+ DFCVADL       GYPC  PA VT +DF F GL  A  T  S + +AVT A V + P +N LG+S++R+D A GG+ P H HP A
Sbjct:   26 MLQDFCVADLSNGLKVNGYPCKDPAKVTPEDFYFIGLATAAATANSSMGSAVTGANVEKVPGLNTLGVSISRIDYAPGGLNPPHLHPRA 114          
The following BLAST results are available for this feature:
BLAST of EY665205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
GLT1_ARATH1.121e-1647.13Germin-like protein subfamily T member 1 OS=Arabid... [more]
GL12_ARATH7.021e-1643.18Putative germin-like protein subfamily 1 member 2 ... [more]
GL120_ARATH7.028e-1647.13Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GL37_ORYSJ7.250e-1647.25Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GL116_ARATH1.543e-1547.13Germin-like protein subfamily 1 member 16 OS=Arabi... [more]
GL118_ARATH1.543e-1545.98Germin-like protein subfamily 1 member 18 OS=Arabi... [more]
GL11_ORYSJ2.755e-1552.27Germin-like protein 1-1 OS=Oryza sativa subsp. jap... [more]
GL15_ARATH3.388e-1541.86Germin-like protein subfamily 1 member 5 OS=Arabid... [more]
GLT2_ARATH3.598e-1550.57Germin-like protein subfamily T member 2 OS=Arabid... [more]
GL23_ARATH3.598e-1549.44Germin-like protein subfamily 2 member 3 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-C04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665205 ID=EY665205; Name=EY665205; organism=Citrus sinensis; type=EST; length=1035bp
ATCAAATAACTACACTAAATATTAGTCAAAATGCTTCACATTCTCTTCTT
CTTCCTTGCTTTCGTATCCTCTTCCTCCAATGCTATGGTTAACGACTTCT
GCGTCGCTGACCTAAAGCTGTCGGATAGTCCCGCCGGCTATCCTTGCGTG
CCCCCCGCTATGGTTACCGCTGACGACTTCGTATTTTCGGGCCTCGGCGT
GGCCGGAAACACCACGAGCATTATCAACGCGGCAGTGACACCTGCATTTG
TAGCTCAATTTCCGGCCGTGAATGGGCTCGGACTCTCCTTGGCACGCCTA
GATCTTGCAAAGGGTGGCGTAATCCCAATCCACACTCATCCAGCTGCTTT
CCGAAATCCTTCTTGTTGTGGCATGGCTGCATAACTGCCGGGGTCTTTTC
CTCTTCAGCTAACACTGTTTACGTAAAGACGCTTAAAAAGGGAGATATCA
TGATCTTTCCACAAGGGTTGGTGCTTTTTCAAGTAATTTCCGGTGCGGAC
GGACCCCCCGGTTTTGTAACTTCCACCGCCCAAATCTGGGACTCCAATCA
CCGAATTTCCCCTAATTGCTAACAACTTGGCTCCCAATGGGGGGAACAAA
CCCTTTTCCCTTGACCAGCTACCGGGAAAAAGCCCAGGGTTCCATGGGGG
CACCGGATGCTATTTATTACCCATTCTCCTTGGAGTTTAGGACTCTAAAT
CTCTATATATTGGCAAGTGTTAATTGGGAGAAACCAAATATATATCTGTT
CCCCTCCCCCTATTTTCTCTTAAAAAATAATCTTCCCAAAACAAAAATAG
GGGTATATCGTTATGGAACACTGTAACACATGGGTTGTGAGTCATACTTT
TTAGGGGGTCATATACTCACGGCGCGGTTTTTCTGTGGGGGGACGTCTCG
GATATCTTATAACGATGAATAACCATTATGATGCGGGAATTGAAAGGCCT
CGGACCCTTCTAGTGTGCTTATGATGACGGTAGTGTTATTAATATAGGGA
GGAGACATGCAAGAGATTATAAGCAAACCCTTACT
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