EY665202

Overview
NameEY665202
Unique NameEY665202
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1003
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.957e-18
Identity = 53/149 (35.57%), Postives = 82/149 (55.03%), Query Frame = 2
Query:   74 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSNFRCEREPSVFVAFNN 520
            + D CVAD        G+PC     +T  DF F+G+       S + +AVT A V + P +N L +SLAR+D A GG+ P HTHP A+E++ V+ G +  GFI+++ K   +  ++      +FP+G++ F  N   +   SV  AFN+
Sbjct:   28 LQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITTANKLFTKTIKIGEVF--VFPRGLVHFQKN-NGKSPASVLSAFNS 173          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.556e-18
Identity = 66/159 (41.51%), Postives = 90/159 (56.60%), Query Frame = 2
Query:   74 VNDFCVAD------LKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGN---TTSIINAAVTPAFVAQFPAVNGLGLSLARLDL-AKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSNFRCEREPSVFVAFNN 520
            V DFCV D      ++L+  PA YPC  PA +TA DF FSG+  AGN    T     +VTP   AQFP ++ LG+S AR DL A GGV P H HP A+E  LV+ G + AGF+ S  +  L  + L +    +FP+ ++ F  N   +   +V+ AFN+
Sbjct:   28 VQDFCVPDAGRGRPVELAMLPA-YPCRSPANLTAGDFAFSGVRAAGNFSPETGFAGVSVTP---AQFPGLHTLGMSFARADLSAAGGVNPPHYHPRATETALVLAGRVYAGFVDSGGR--LFAKVLEQGEVMVFPRAMVHFQLNVG-DTPATVYGAFNS 179          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.359e-18
Identity = 58/139 (41.73%), Postives = 80/139 (57.55%), Query Frame = 2
Query:   71 MVNDFCVADLKLSDSPA---GYPCVPPAMVTADDFVFSGLGVAGNTTS--IINAAVTPAFVAQFPAVNGLGLSLARLDLAK-GGVIPIHTHPAASEILLVVHGCITAGFI---SSSAKHCLRKRRLRREIS*IFPQGVL 460
            M+ D CVAD K    P    G+PC P A VTA+DF F GLG   +  S   + +AVT A V + P +N LG+S+AR+D A  GG  P H+HP A+EIL V  G +  GF+   ++ A   L  R + +    +FP+G+L
Sbjct:   32 MLQDICVADYKSLQGPLRVNGFPCKPEANVTAEDFFFPGLGKPADVYSGNPMGSAVTAATVERIPGLNTLGVSMARVDYAPWGGANPPHSHPRATEILFVADGLLEVGFVVATAAPASSRLITRVVPKGGVFVFPRGLL 170          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.694e-18
Identity = 60/153 (39.22%), Postives = 84/153 (54.90%), Query Frame = 2
Query:   74 VNDFCVADLKLSDSPA------GYPCVPPAMVTADDFVFSGLGVAGNT-TSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSNFRCEREPSVFVA 511
            + DFC+      ++PA      G  C  P +VTADDF FSGL  A  T +S + + VT   V Q P +N LG+SL R+D    G  P HTHP A+EILLV  G +  GF SS  ++ L  + L +    +FP+G++ F  N    ++P+V  A
Sbjct:   30 LQDFCIG----VNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFPENRLFNKTLNKGDVFVFPEGLIHFQVNI--GKQPAVAFA 176          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL88_ORYSJ (Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.436e-18
Identity = 53/146 (36.30%), Postives = 81/146 (55.48%), Query Frame = 2
Query:   74 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSNFRCEREPSVFVA 511
            + DFCVAD        G+ C+ P  VTAD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  + L  + L +    +FP+G++ F  N     +P+V +A
Sbjct:   28 LQDFCVADKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPN-PHQPAVAIA 172          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL810_ORYSJ (Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 9.712e-18
Identity = 52/146 (35.62%), Postives = 81/146 (55.48%), Query Frame = 2
Query:   74 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSNFRCEREPSVFVA 511
            + DFCVAD+       G+ C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  + L  + L +    +FP+G++ F  N     +P+V +A
Sbjct:   28 LQDFCVADMHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPN-PHQPAVAIA 172          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL34_ARATH (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 9.712e-18
Identity = 52/138 (37.68%), Postives = 82/138 (59.42%), Query Frame = 2
Query:  122 GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLF--SSNFRCEREPSVFVAFNNPKS 529
            GYPC  P  +TA DF  + L  AG+T + + + VT     +FP +N LGLS++R DL + G +P H+HP +SE+L VV G + AGF+ ++ K  + +  L++    +FP+G+L F  S  F    EP+   +F N ++
Sbjct:   41 GYPCKNPTKITAQDFKSTKLTEAGDTDNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVVFAGFVDTNNK--IFQTVLQKGDVFVFPKGLLHFCLSGGF----EPATAFSFYNSQN 172          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 9.712e-18
Identity = 53/138 (38.41%), Postives = 77/138 (55.80%), Query Frame = 2
Query:   68 AMVNDFCVADLKLSDSPA--GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSN 475
            + + DFCV+    ++     G  C  P +VTADDF FSGL  A   TS + + VT   V     +N LG+SL R+D A  G  P HTHP A+EIL+V  G +  GF++S+  + L  + L      +FP+G++ F +N
Sbjct:   28 SQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGTLLVGFVTSNPDNRLFSKVLNEGDVFVFPEGLIHFQAN 165          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.657e-17
Identity = 60/152 (39.47%), Postives = 90/152 (59.21%), Query Frame = 2
Query:   74 VNDFCVADLK-LSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS-SAKHCLRKRRLRREIS*IFPQGVLLFSSNFRCEREPSVFVAFNN 520
            + DFCVADL   + S  G+PC P +    DDF+FS  L  AGNT++   +AVT   VA++P  N LG+S+ R+D A GG  P H HP A+EI +V+ G +  G + S  + + L  R +R   + + P+G++ F  N   + E S+ V+FN+
Sbjct:   29 LQDFCVADLDGKAVSVNGHPCKPMSEA-GDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVG-KTEASMVVSFNS 178          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.657e-17
Identity = 52/135 (38.52%), Postives = 77/135 (57.04%), Query Frame = 2
Query:   71 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSN 475
            M+ D CVADL       G+PC      TA DF    +   G T +   + VT A V Q P +N LG+SLAR+D A GG+ P HTHP ASE++ V+ G +  GFI+++  + L  +++ +    +FP+G++ F  N
Sbjct:   37 MLQDVCVADLHSKVKVNGFPC--KTNFTAADFSSFAISKPGATNNKFGSKVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITTA--NVLVSKQITKGEVFVFPRGLVHFQKN 167          
The following BLAST results are available for this feature:
BLAST of EY665202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
GL22_ARATH1.957e-1835.57Germin-like protein subfamily 2 member 2 OS=Arabid... [more]
GL24_ORYSJ2.556e-1841.51Germin-like protein 2-4 OS=Oryza sativa subsp. jap... [more]
GL14_ORYSJ4.359e-1841.73Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]
GL112_ARATH5.694e-1839.22Putative germin-like protein subfamily 1 member 12... [more]
GL88_ORYSJ7.436e-1836.30Germin-like protein 8-8 OS=Oryza sativa subsp. jap... [more]
GL810_ORYSJ9.712e-1835.62Germin-like protein 8-10 OS=Oryza sativa subsp. ja... [more]
GL34_ARATH9.712e-1837.68Germin-like protein subfamily 3 member 4 OS=Arabid... [more]
GL111_ARATH9.712e-1838.41Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
OXO2_HORVU1.657e-1739.47Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
NEC1_NICPL1.657e-1738.52Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665202 ID=EY665202; Name=EY665202; organism=Citrus sinensis; type=EST; length=1003bp
CTAAATATTAGTCAAAATGCTTCACATTCTCTTCTTCTTCCTTGCTTTCG
TATCCTCTTCCTCCAATGCTATGGTTAACGACTTCTGCGTCGCTGACCTA
AAGCTGTCGGATAGTCCCGCCGGCTATCCTTGCGTGCCCCCCGCTATGGT
TACCGCTGACGACTTCGTATTTTCGGGCCTCGGCGTGGCCGGAAACACCA
CGAGCATTATCAACGCGGCAGTGACACCTGCATTTGTAGCTCAATTTCCG
GCCGTGAATGGGCTCGGACTCTCCTTGGCACGCCTAGATCTTGCAAAGGG
TGGCGTAATCCCAATCCACACTCATCCAGCTGCTTCCGAAATCCTTCTTG
TTGTGCATGGCTGCATAACTGCCGGGTTCATTTCCTCTTCAGCTAAACAC
TGTTTACGTAAAAGACGCTTAAGAAGGGAGATATCATGAATCTTTCCACA
AGGGGTGTTGCTTTTTTCAAGTAATTTCCGGTGCGAACGGGAACCCTCGG
TTTTTGTAGCCTTCAACAACCCGAAATCCCTGGAATTCCCAATCCCCGAA
TTTCCCCCTTTTTTGCTAAAAACTTGGTCCTCCCCATTTGGGGTGGAGAA
CAAAACCACTTTCCCTTGAAAATAGCAAGGGGGAAAAAGGGCTCAAGGGC
ATAACCCTTTGGGGGGGCCCCGGGCAGGGGGTTATTAATTTACAAAAATT
TACTTTCATTTTGGGAGGTTTTGGAGGACCTAAATTTTCCCTTTAAACTT
GCCAAAGGGGTTTTGGGATTGGGGGGGAAAATTCCACAAAAATATGAAAT
TTTTTCTGGTTACCCCCACCTTCCCCCCCCATGCTTTTTTCTCCCTGGAG
AAAAAAAAAAACAAAAATTTTTTCCTCCCTCAAAAAAAAATAAAAAAAAA
AAAAAAAGGGGGGGGAGGGGCCGCTGCCTCATCAGGAGAGAAGTTCGCCC
AAAGTGACCTTATTTAAGATTGAAAGCGCGGGGAGGGGGGGGGGGGGTCG
CAG
back to top