EY665202

Overview
NameEY665202
Unique NameEY665202
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1003
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.645e-15
Identity = 55/152 (36.18%), Postives = 83/152 (54.61%), Query Frame = 2
Query:   74 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS-SAKHCLRKRRLRREIS*IFPQGVLLFSSNFRCEREPSVFVAFNN 520
            + DFCVADL    +  GYPC  P     D+F+FS  L   G+  +  N + VT   VA +P VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I S    +    R +R   + + P+G++ F  N   + E ++ V+FN+
Sbjct:   32 LQDFCVADLDSEVTLNGYPC-KPTPAAGDEFLFSSRLATGGDVNANPNGSNVTQLDVAGWPGVNTLGVSMNRIDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRGLMHFQFNVG-KTEATMVVSFNS 181          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL14_ARATH (Germin-like protein subfamily 1 member 4 OS=Arabidopsis thaliana GN=At3g04180 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.454e-15
Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 2
Query:   74 VNDFCVADLKLSDSPA-GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-KHCLRKRRLRREIS*IFPQGVLLFSSN 475
            + D+CVA  + +     G  C  P  VT +DF  SGL V GNT     A  T   V + P +N LG+ +AR D A GG+ P HTHP  S+I LV+ G +  GF+SS+   + L  + L      +FP+G++ F +N
Sbjct:   30 LQDYCVATNETNGVYVNGEFCKDPKRVTTNDFYTSGLNVPGNTIIGPGARNTVVDVERLPGLNTLGVDIARYDFAPGGLDPPHTHPRGSQIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIHFHAN 165          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL19_ARATH (Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.695e-15
Identity = 50/136 (36.76%), Postives = 70/136 (51.47%), Query Frame = 2
Query:   74 VNDFCVADLKLSDSPA--GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSN 475
            + DFCV     +D     G  C  P +VT +DF F+GL  A        + VT   V   P +N LG+SL R+D    G  P HTHP ASE+L V  G +  GF++S+ ++ L  + L      +FPQG++ F  N
Sbjct:   28 LQDFCVGVNTPADGVFVNGKFCKDPKLVTVEDFFFTGLHEARPPNPKTGSNVTAVNVNNLPGLNTLGISLVRIDYGVYGQNPPHTHPRASEVLYVAVGTLFVGFVTSNPENRLFSKTLYEGDVFVFPQGLIHFQVN 163          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.005e-14
Identity = 51/140 (36.43%), Postives = 74/140 (52.86%), Query Frame = 2
Query:   80 DFCVADLKLSDSPA-----GYPCVPPAMVTADDFVFSGLGVAGNTTSII---NAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSN 475
            D+CVAD   + +       G  C+ PA+  AD F  S L  A N  + +   NA +T    A  P  N  GL++AR+DLA GG+ P H+HP ASE  LV+ G +  GF  +S +  L  + LR   + +FP+ ++ F  N
Sbjct:   29 DYCVADTAAATAAGAFHLNGLACIDPALARADHFATSALSRATNPAATLYGFNATLTSP-AASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLSGSVLVGFADTSYR--LYTQLLRAGEAFVFPRAMVHFLYN 165          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL35_ORYSJ (Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.819e-14
Identity = 51/152 (33.55%), Postives = 84/152 (55.26%), Query Frame = 2
Query:   74 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS-SAKHCLRKRRLRREIS*IFPQGVLLFSSNFRCEREPSVFVAFNN 520
            + DFCVADL    +  G+ C  PA    D+F+FS  +   G+  +  N + VT   VA++P VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I +    +    + +R   + + P+G++ F  N   + E ++ V+FN+
Sbjct:   32 LQDFCVADLNSEVTVNGHAC-KPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVG-KTEATMVVSFNS 181          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL36_ORYSJ (Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.988e-14
Identity = 51/152 (33.55%), Postives = 84/152 (55.26%), Query Frame = 2
Query:   74 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS-SAKHCLRKRRLRREIS*IFPQGVLLFSSNFRCEREPSVFVAFNN 520
            + DFCVADL    +  G+ C  PA    D+F+FS  +   G+  +  N + VT   VA++P VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I +    +    + +R   + + P+G++ F  N   + E ++ V+FN+
Sbjct:   34 LQDFCVADLDSKVTVNGHAC-KPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVG-KTEATMVVSFNS 183          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.514e-14
Identity = 51/152 (33.55%), Postives = 84/152 (55.26%), Query Frame = 2
Query:   74 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS-SAKHCLRKRRLRREIS*IFPQGVLLFSSNFRCEREPSVFVAFNN 520
            + DFCVADL    +  G+ C  PA    D+F+FS  +   G+  +  N + VT   VA++P VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I +    +    + +R   + + P+G++ F  N   + E ++ V+FN+
Sbjct:   34 LQDFCVADLDSKVTVNGHAC-KPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDMGNRYYSKVVRAGETFVIPRGLMHFQFNVG-KTEATMVVSFNS 183          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 8.508e-14
Identity = 49/141 (34.75%), Postives = 71/141 (50.35%), Query Frame = 2
Query:   74 VNDFCVADLKLSDSP-------AGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSN 475
            + DFC+   K   SP          PC   + VT +DFVFSGL  AGN T     A  P     FP +N LG+S  R DL  G + P H HP A+E+  +V G + +GF+ S+ K  +  + +      ++P+G++ F  N
Sbjct:   30 IQDFCIP--KPVTSPYHDHHFSTNLPCKNSSEVTTEDFVFSGLKTAGNFTET-GFATVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDSNNK--VYAKVMEEGEMMVYPKGLVHFQMN 165          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.111e-13
Identity = 54/151 (35.76%), Postives = 81/151 (53.64%), Query Frame = 2
Query:   74 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTT-SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS---SAKHCLRKRRLRREIS*IFPQGVLLFSSNFRCEREPSVFVA 511
            + DFCVAD        G+PC     V  DDF  +  L    +TT S   + VT   V +   +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S   + ++ L  + L +    +FPQG++ F  N   ++ P+V +A
Sbjct:   28 LQDFCVADRNSPVHVNGFPCKDAKDVNVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVLEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDK-PAVAIA 177          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL121_ORYSJ (Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.895e-13
Identity = 54/151 (35.76%), Postives = 80/151 (52.98%), Query Frame = 2
Query:   74 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVF-SGLGVAGNTT-SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS---SAKHCLRKRRLRREIS*IFPQGVLLFSSNFRCEREPSVFVA 511
            + DFCVAD        G+PC     V  DDF   + L    +TT S   + VT   V +   +N LG+S+AR+D A  G  P HTHP A+EIL V  G +  GF++S   + ++ L  + L +    +FPQG++ F  N   ++ P+V +A
Sbjct:   28 LQDFCVADRNSPVRVNGFPCKDAKDVNVDDFFLEANLDKPMDTTKSKAGSNVTLINVMKLTGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVFEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDK-PAVAIA 177          
The following BLAST results are available for this feature:
BLAST of EY665202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
GL33_ORYSJ2.645e-1536.18Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL14_ARATH3.454e-1538.24Germin-like protein subfamily 1 member 4 OS=Arabid... [more]
GL19_ARATH7.695e-1536.76Putative germin-like protein subfamily 1 member 9 ... [more]
GL31_ORYSJ1.005e-1436.43Germin-like protein 3-1 OS=Oryza sativa subsp. jap... [more]
GL35_ORYSJ3.819e-1433.55Germin-like protein 3-5 OS=Oryza sativa subsp. jap... [more]
GL36_ORYSJ4.988e-1433.55Germin-like protein 3-6 OS=Oryza sativa subsp. jap... [more]
GL34_ORYSJ6.514e-1433.55Putative germin-like protein 3-4 OS=Oryza sativa s... [more]
GL32_ARATH8.508e-1434.75Germin-like protein subfamily 3 member 2 OS=Arabid... [more]
GL122_ORYSJ1.111e-1335.76Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]
GL121_ORYSJ1.895e-1335.76Germin-like protein 12-1 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665202 ID=EY665202; Name=EY665202; organism=Citrus sinensis; type=EST; length=1003bp
CTAAATATTAGTCAAAATGCTTCACATTCTCTTCTTCTTCCTTGCTTTCG
TATCCTCTTCCTCCAATGCTATGGTTAACGACTTCTGCGTCGCTGACCTA
AAGCTGTCGGATAGTCCCGCCGGCTATCCTTGCGTGCCCCCCGCTATGGT
TACCGCTGACGACTTCGTATTTTCGGGCCTCGGCGTGGCCGGAAACACCA
CGAGCATTATCAACGCGGCAGTGACACCTGCATTTGTAGCTCAATTTCCG
GCCGTGAATGGGCTCGGACTCTCCTTGGCACGCCTAGATCTTGCAAAGGG
TGGCGTAATCCCAATCCACACTCATCCAGCTGCTTCCGAAATCCTTCTTG
TTGTGCATGGCTGCATAACTGCCGGGTTCATTTCCTCTTCAGCTAAACAC
TGTTTACGTAAAAGACGCTTAAGAAGGGAGATATCATGAATCTTTCCACA
AGGGGTGTTGCTTTTTTCAAGTAATTTCCGGTGCGAACGGGAACCCTCGG
TTTTTGTAGCCTTCAACAACCCGAAATCCCTGGAATTCCCAATCCCCGAA
TTTCCCCCTTTTTTGCTAAAAACTTGGTCCTCCCCATTTGGGGTGGAGAA
CAAAACCACTTTCCCTTGAAAATAGCAAGGGGGAAAAAGGGCTCAAGGGC
ATAACCCTTTGGGGGGGCCCCGGGCAGGGGGTTATTAATTTACAAAAATT
TACTTTCATTTTGGGAGGTTTTGGAGGACCTAAATTTTCCCTTTAAACTT
GCCAAAGGGGTTTTGGGATTGGGGGGGAAAATTCCACAAAAATATGAAAT
TTTTTCTGGTTACCCCCACCTTCCCCCCCCATGCTTTTTTCTCCCTGGAG
AAAAAAAAAAACAAAAATTTTTTCCTCCCTCAAAAAAAAATAAAAAAAAA
AAAAAAAGGGGGGGGAGGGGCCGCTGCCTCATCAGGAGAGAAGTTCGCCC
AAAGTGACCTTATTTAAGATTGAAAGCGCGGGGAGGGGGGGGGGGGGTCG
CAG
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