EY665202

Overview
NameEY665202
Unique NameEY665202
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1003
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.515e-13
Identity = 49/161 (30.43%), Postives = 80/161 (49.69%), Query Frame = 2
Query:   74 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG---------LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS---SAKHCLRKRRLRREIS*IFPQGVLLFSSNFRCEREPSVFVAFNN 520
            + D CVAD        G+PC     V+ DDF  +             AG+  ++IN       V +   +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S   + ++ L  + L +    +FP+G++ F  N   ++  +  VA ++
Sbjct:   28 LQDLCVADKNSPVRVNGFPCKDAKDVSVDDFFLAANLDKPMDITKSKAGSNVTLIN-------VMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILSVIEGSLYVGFVTSNQANGENKLFTKTLNKGDVFVFPEGLIHFQFNPSYDKPAAAIVALSS 181          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.407e-13
Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = 2
Query:  122 GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSNF 478
            G+ C  P+ + A DF    L  AG+  +++ ++       +FP +N LG+S+AR D+A  G +  H+HP ASE++ V  G + AGF  +  K  L ++ L      IFP+G++ F  N+
Sbjct:   46 GFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDTKGK--LFQKTLAEGDVFIFPRGLVHFIMNY 162          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 2.096e-12
Identity = 53/151 (35.10%), Postives = 80/151 (52.98%), Query Frame = 2
Query:   74 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTT-SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS---SAKHCLRKRRLRREIS*IFPQGVLLFSSNFRCEREPSVFVA 511
            + DFCVAD        G PC     V+ DDF  +  L    +TT S   + VT   V +   +N L +S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S   + ++ L  + L +    +FPQG++ F  N   ++ P+V +A
Sbjct:   28 LQDFCVADKHSPVRVNGLPCKDAKDVSVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEILTVLEGSLYVGFVTSNQANRENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDK-PAVAIA 177          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 2.096e-12
Identity = 46/140 (32.86%), Postives = 71/140 (50.71%), Query Frame = 2
Query:   74 VNDFCVADLKLSDSPA---GYPCVPPAMVTADDFVFSGLGVAGNTTS---IINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSN 475
            + D+CV+    S       G  C  P   +  DF  S L   GNT +   +IN  VT    A  P +N +GL++ARLD    GV+P H HP ASE+ + + G +  GF+ +S +  +  + L    + +FP+G++ F  N
Sbjct:   23 LQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRPGNTKTKPFMINVTVTTT--ANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFVDTSGR--VFTQELHPGETFVFPKGLIHFLYN 158          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.317e-11
Identity = 44/115 (38.26%), Postives = 63/115 (54.78%), Query Frame = 2
Query:  140 PAMVTADDFVFSGLGVAGNTTSIINA---AVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSN 475
            P  +T D F F+G     NT+S        VT A +A+FPA+NG  +S A L      V P HTHP ++E+LLVV G ++ GFI ++ K  L  + L      +FP+G++ F  N
Sbjct:   42 PMNITGDFFTFTGFRKVFNTSSAPEPNSFTVTKATMAEFPALNGQSVSYATLVFPPSTVNPPHTHPRSAELLLVVDGALSVGFIDTTNK--LYTQDLAAGDMFVFPKGMVHFQFN 154          
The following BLAST results are available for this feature:
BLAST of EY665202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
GL123_ORYSJ5.515e-1330.43Putative germin-like protein 12-3 OS=Oryza sativa ... [more]
GL111_ORYSJ9.407e-1333.61Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]
GL124_ORYSJ2.096e-1235.10Putative germin-like protein 12-4 OS=Oryza sativa ... [more]
GL11_ARATH2.096e-1232.86Germin-like protein subfamily 1 member 1 OS=Arabid... [more]
GL92_ORYSJ2.317e-1138.26Putative germin-like protein 9-2 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665202 ID=EY665202; Name=EY665202; organism=Citrus sinensis; type=EST; length=1003bp
CTAAATATTAGTCAAAATGCTTCACATTCTCTTCTTCTTCCTTGCTTTCG
TATCCTCTTCCTCCAATGCTATGGTTAACGACTTCTGCGTCGCTGACCTA
AAGCTGTCGGATAGTCCCGCCGGCTATCCTTGCGTGCCCCCCGCTATGGT
TACCGCTGACGACTTCGTATTTTCGGGCCTCGGCGTGGCCGGAAACACCA
CGAGCATTATCAACGCGGCAGTGACACCTGCATTTGTAGCTCAATTTCCG
GCCGTGAATGGGCTCGGACTCTCCTTGGCACGCCTAGATCTTGCAAAGGG
TGGCGTAATCCCAATCCACACTCATCCAGCTGCTTCCGAAATCCTTCTTG
TTGTGCATGGCTGCATAACTGCCGGGTTCATTTCCTCTTCAGCTAAACAC
TGTTTACGTAAAAGACGCTTAAGAAGGGAGATATCATGAATCTTTCCACA
AGGGGTGTTGCTTTTTTCAAGTAATTTCCGGTGCGAACGGGAACCCTCGG
TTTTTGTAGCCTTCAACAACCCGAAATCCCTGGAATTCCCAATCCCCGAA
TTTCCCCCTTTTTTGCTAAAAACTTGGTCCTCCCCATTTGGGGTGGAGAA
CAAAACCACTTTCCCTTGAAAATAGCAAGGGGGAAAAAGGGCTCAAGGGC
ATAACCCTTTGGGGGGGCCCCGGGCAGGGGGTTATTAATTTACAAAAATT
TACTTTCATTTTGGGAGGTTTTGGAGGACCTAAATTTTCCCTTTAAACTT
GCCAAAGGGGTTTTGGGATTGGGGGGGAAAATTCCACAAAAATATGAAAT
TTTTTCTGGTTACCCCCACCTTCCCCCCCCATGCTTTTTTCTCCCTGGAG
AAAAAAAAAAACAAAAATTTTTTCCTCCCTCAAAAAAAAATAAAAAAAAA
AAAAAAAGGGGGGGGAGGGGCCGCTGCCTCATCAGGAGAGAAGTTCGCCC
AAAGTGACCTTATTTAAGATTGAAAGCGCGGGGAGGGGGGGGGGGGGTCG
CAG
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