EY665201

Overview
NameEY665201
Unique NameEY665201
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1227
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665201 vs. ExPASy Swiss-Prot
Match: IVD2_SOLTU (Isovaleryl-CoA dehydrogenase 2, mitochondrial (Fragment) OS=Solanum tuberosum GN=IVD2 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.061e-16
Identity = 45/128 (35.16%), Postives = 69/128 (53.91%), Query Frame = 1
Query:   55 VACGATGLAQRCLDEATKYALERKAFGTQIANFQAIQFMLADMAVAVETARMAYQRAAWEFDQGRRNTYYASVAKCYAGDIANKCAADAVQIFGGAGFNTEYPVEKLMRECQIYQIYEGTXQIQRQII 438
            +A G  G+ Q CLD    Y  +R+ FG  I  FQ +Q  +ADM  +++++R      A E D G  NT   +     A + A + A  A+Q  GG G+  EYP  + +R+ ++Y+I  GT +I+R II
Sbjct:  266 LASGPVGIMQACLDVVLPYVKQREQFGRPIGEFQFVQGKVADMYTSMQSSRSYLYSVARECDSGTINTKDCAGVILSAAERATQVALQAIQCLGGNGYVNEYPTGRFLRDAKLYEIGAGTSEIRRMII 393          
BLAST of EY665201 vs. ExPASy Swiss-Prot
Match: IVD1_SOLTU (Isovaleryl-CoA dehydrogenase 1, mitochondrial OS=Solanum tuberosum GN=IVD1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.061e-16
Identity = 45/128 (35.16%), Postives = 70/128 (54.69%), Query Frame = 1
Query:   55 VACGATGLAQRCLDEATKYALERKAFGTQIANFQAIQFMLADMAVAVETARMAYQRAAWEFDQGRRNTYYASVAKCYAGDIANKCAADAVQIFGGAGFNTEYPVEKLMRECQIYQIYEGTXQIQRQII 438
            +A G  G+ Q C+D    Y  +R+ FG  I  FQ IQ  LADM  A++++R      A + D G+ +    S     A + A + A  A+Q  GG G+  EYP  +L+R+ ++Y+I  GT +I+R +I
Sbjct:  277 LAAGPVGIMQACMDIVIPYVRQREQFGRPIGEFQLIQGKLADMYTALQSSRSYVYAVAKDCDNGKIDPKDCSGTILLAAERATQVALQAIQCLGGNGYINEYPTGRLLRDAKMYEIAAGTSEIRRLVI 404          
BLAST of EY665201 vs. ExPASy Swiss-Prot
Match: IVD_ARATH (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=IVD PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 3.875e-14
Identity = 42/128 (32.81%), Postives = 69/128 (53.91%), Query Frame = 1
Query:   55 VACGATGLAQRCLDEATKYALERKAFGTQIANFQAIQFMLADMAVAVETARMAYQRAAWEFDQGRRNTYYASVAKCYAGDIANKCAADAVQIFGGAGFNTEYPVEKLMRECQIYQIYEGTXQIQRQII 438
            +A G  G+ Q CLD    Y  +R+ FG  +  FQ IQ  +ADM  A++++R      A + D G+ +    +     A + A + A  A+Q  GG G+  EY   +L+R+ ++Y+I  GT +I+R +I
Sbjct:  274 LAAGPLGIMQACLDNVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGTILCAAERATQVALQAIQCLGGNGYINEYATGRLLRDAKLYEIGAGTSEIRRIVI 401          
BLAST of EY665201 vs. ExPASy Swiss-Prot
Match: IVD_PONAB (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=IVD PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.923e-13
Identity = 40/128 (31.25%), Postives = 67/128 (52.34%), Query Frame = 1
Query:   55 VACGATGLAQRCLDEATKYALERKAFGTQIANFQAIQFMLADMAVAVETARMAYQRAAWEFDQGRRNTYYASVAKCYAGDIANKCAADAVQIFGGAGFNTEYPVEKLMRECQIYQIYEGTXQIQRQII 438
            +A G  GL Q  LD    Y   R+AFG +I +FQ +Q  +ADM   +   R      A   D+G       +    Y+ + A + A D +Q FGG G+  ++P+ + +R+ ++Y+I  GT +++R +I
Sbjct:  287 LAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVI 414          
BLAST of EY665201 vs. ExPASy Swiss-Prot
Match: IVD_HUMAN (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=IVD PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.923e-13
Identity = 40/128 (31.25%), Postives = 67/128 (52.34%), Query Frame = 1
Query:   55 VACGATGLAQRCLDEATKYALERKAFGTQIANFQAIQFMLADMAVAVETARMAYQRAAWEFDQGRRNTYYASVAKCYAGDIANKCAADAVQIFGGAGFNTEYPVEKLMRECQIYQIYEGTXQIQRQII 438
            +A G  GL Q  LD    Y   R+AFG +I +FQ +Q  +ADM   +   R      A   D+G       +    Y+ + A + A D +Q FGG G+  ++P+ + +R+ ++Y+I  GT +++R +I
Sbjct:  287 LAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVI 414          
BLAST of EY665201 vs. ExPASy Swiss-Prot
Match: IVD_BOVIN (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=IVD PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 4.284e-13
Identity = 39/128 (30.47%), Postives = 67/128 (52.34%), Query Frame = 1
Query:   55 VACGATGLAQRCLDEATKYALERKAFGTQIANFQAIQFMLADMAVAVETARMAYQRAAWEFDQGRRNTYYASVAKCYAGDIANKCAADAVQIFGGAGFNTEYPVEKLMRECQIYQIYEGTXQIQRQII 438
            +A G  G+ Q  LD    Y   R+AFG +I +FQ +Q  +ADM   +   R      A   D+G   T   +    Y+ + A + A D +Q  GG G+  ++P+ + +R+ ++Y+I  GT +++R +I
Sbjct:  290 LAGGPLGIMQAVLDHTIPYLHMREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTTKDCAGVILYSAECATQVALDGIQCLGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVI 417          
BLAST of EY665201 vs. ExPASy Swiss-Prot
Match: ACADL_PIG (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa GN=ACADL PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 5.595e-13
Identity = 39/130 (30.00%), Postives = 67/130 (51.54%), Query Frame = 1
Query:   67 ATGLAQRCLDEATKYALERKAFGTQIANFQAIQFMLADMAVAVETARMAYQRAAWEFDQGRRNTYYASVAKCYAGDIANKCAADAVQIFGGAGFNTEYPVEKLMRECQIYQIYEGTXQIQRQIIA*NHIH 456
            A   ++   +E   Y  +RKAFG  +A+ Q +Q  LA++   +   R          +  R  +  AS+AK +A ++ N  A D VQ+ GG G+  EYP+ +   + ++  IY GT +I +++IA   +H
Sbjct:  299 AVSASEFMFEETRNYVKQRKAFGKTVAHIQTVQHKLAELKTHICVTRAFVDSCLQLHETKRLESAAASMAKYWASELQNSVAYDCVQLHGGWGYMWEYPIARAYVDARVQPIYGGTNEIMKELIAREIVH 428          
BLAST of EY665201 vs. ExPASy Swiss-Prot
Match: YDIO_ECOLI (Uncharacterized protein ydiO OS=Escherichia coli (strain K12) GN=ydiO PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.307e-13
Identity = 43/122 (35.25%), Postives = 66/122 (54.10%), Query Frame = 1
Query:   58 ACGATGLAQRCLDEATKYALERKAFGTQIANFQAIQFMLADMAVAVETARMAYQRAAWEFDQGRRNTYYASVAKCYAGDIANKCAADAVQIFGGAGFNTEYPVEKLMRECQIYQIYEGTXQI 423
            A  +TG A+   ++A +YA +R AFG  I + Q IQ  LA MA+ ++  R    + AW+ DQ +     A++AK Y    A +   DA+QI GG G+  E  V +  R+ +  +I  GT +I
Sbjct:  246 AARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALAKLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEI 367          
BLAST of EY665201 vs. ExPASy Swiss-Prot
Match: YDIO_ECOL6 (Uncharacterized protein ydiO OS=Escherichia coli O6 GN=ydiO PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.307e-13
Identity = 43/122 (35.25%), Postives = 66/122 (54.10%), Query Frame = 1
Query:   58 ACGATGLAQRCLDEATKYALERKAFGTQIANFQAIQFMLADMAVAVETARMAYQRAAWEFDQGRRNTYYASVAKCYAGDIANKCAADAVQIFGGAGFNTEYPVEKLMRECQIYQIYEGTXQI 423
            A  +TG A+   ++A +YA +R AFG  I + Q IQ  LA MA+ ++  R    + AW+ DQ +     A++AK Y    A +   DA+QI GG G+  E  V +  R+ +  +I  GT +I
Sbjct:  246 AARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALAKLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEI 367          
BLAST of EY665201 vs. ExPASy Swiss-Prot
Match: YDIO_ECO57 (Uncharacterized protein ydiO OS=Escherichia coli O157:H7 GN=ydiO PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.307e-13
Identity = 43/122 (35.25%), Postives = 66/122 (54.10%), Query Frame = 1
Query:   58 ACGATGLAQRCLDEATKYALERKAFGTQIANFQAIQFMLADMAVAVETARMAYQRAAWEFDQGRRNTYYASVAKCYAGDIANKCAADAVQIFGGAGFNTEYPVEKLMRECQIYQIYEGTXQI 423
            A  +TG A+   ++A +YA +R AFG  I + Q IQ  LA MA+ ++  R    + AW+ DQ +     A++AK Y    A +   DA+QI GG G+  E  V +  R+ +  +I  GT +I
Sbjct:  246 AARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALAKLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEI 367          
The following BLAST results are available for this feature:
BLAST of EY665201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
IVD2_SOLTU7.061e-1635.16Isovaleryl-CoA dehydrogenase 2, mitochondrial (Fra... [more]
IVD1_SOLTU7.061e-1635.16Isovaleryl-CoA dehydrogenase 1, mitochondrial OS=S... [more]
IVD_ARATH3.875e-1432.81Isovaleryl-CoA dehydrogenase, mitochondrial OS=Ara... [more]
IVD_PONAB1.923e-1331.25Isovaleryl-CoA dehydrogenase, mitochondrial OS=Pon... [more]
IVD_HUMAN1.923e-1331.25Isovaleryl-CoA dehydrogenase, mitochondrial OS=Hom... [more]
IVD_BOVIN4.284e-1330.47Isovaleryl-CoA dehydrogenase, mitochondrial OS=Bos... [more]
ACADL_PIG5.595e-1330.00Long-chain specific acyl-CoA dehydrogenase, mitoch... [more]
YDIO_ECOLI7.307e-1335.25Uncharacterized protein ydiO OS=Escherichia coli (... [more]
YDIO_ECOL67.307e-1335.25Uncharacterized protein ydiO OS=Escherichia coli O... [more]
YDIO_ECO577.307e-1335.25Uncharacterized protein ydiO OS=Escherichia coli O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665201 ID=EY665201; Name=EY665201; organism=Citrus sinensis; type=EST; length=1227bp
GGCAGGGTCCGTGTTCGGGATTCACCGGGTCGACCCACGCGTCCGAGACC
ACCAGTAGCTTGTGGTGCAACTGGTTTAGCTCAACGTTGTTTAGATGAAG
CTACAAAATATGCTTTAGAACGTAAAGCTTTTGGTACTCAAATTGCAAAT
TTCCAAGCTATTCAATTTATGTTAGCAGATATGGCAGTTGCTGTAGAAAC
AGCTAGAATGGCTTATCAAAGAGCTGCATGGGAATTTGATCAAGGAAGAA
GAAATACTTATTATGCATCTGTTGCTAAATGTTATGCAGGAGATATTGCA
AATAAATGTGCTGCTGATGCTGTTCAAATATTCGGAGGAGCTGGTTTTAA
TACAGAGTATCCAGTTGAAAAATTAATGAGAGAATGCCAAATTTATCAAA
TTTATGAAGGTACANCACAAATTCAAAGACAAATCATTGCATAAAATCAT
ATTCATAGATACATGGAAAATCCAAAATAAGTGTATGAAACAAAATTTTA
TTTAAATTTTAAATTATTTTTATTTTATGAAAAAACATAAGGAAAATATT
CAAGTTGTTTGACGAATGTTAATTTACGGGAACTTTGGATTTTAATTTTA
AATATAAAGGAATATCCAAAGTTAATTTATAATTCATAAATTTTTTATGT
TTTTGTTCCAAAATATTTTATAATTATTTTAATTTTTTTTTTATATAAAA
AAAAACGAAGAAAAAAAAAGGGGGGGGCCGCCCTAAGAGATACAGGTTTA
CTTCCCGGGTGGGCGAATCCATTACTTTCTTTTTGGGGCACTATAATCCA
TTCAGGGGCGGCTTTATCACACCCCGGGGTGGGAAAACCCTGGGGTATAC
CAAATATTCCGCTTCGAACAAACCACCCTGTCCATGGTGGAAATAACGAA
AGCCCGCACTCTTCCTCTTCAATATGTGCCTCGCATGTGGTGAGAGACCC
CCATGAGCGCGATTAAGGCGGGTGTGGGGTGATAAACGGAAACTAAAAGA
TTCGGCTACAGAAACTTTAGATATATTCTTCTTTACAGACGTNGCGGTTA
TCTTGANGTAAGGGGGCTTCTTGGGAATATTTAATAATCGAATACATAAG
TTGATGGGGTGGACGAGAATACATTAATGGCTATATGGGAATTGAGAGTG
ACAGGACTGCCAGTAGCAAGTTTAATGCATGCTTCAGTANCAGGATGATA
AACACCAGCGGAAGCGCGTCGATGTGA
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