EY665195

Overview
NameEY665195
Unique NameEY665195
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1087
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665195 vs. ExPASy Swiss-Prot
Match: SUS2_ARATH (Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g49190 PE=2 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 9.078e-65
Identity = 138/236 (58.47%), Postives = 173/236 (73.31%), Query Frame = 1
Query:   13 NLDDKHLFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVT*S*WVVIG----EKESKDLKDQAEMKKCIPSLIIQ--IEWPVPRIPSSKKRCRNGNLTGTFV-IKREFLGTMPE*AFGMVVVST 699
            N +DK+ FS QFTADLIAMN+ DFIITST+QEIAGSK+ VGQYESHTAFT+PGLYRVVHGIDVFDPKFNIVSPGADM+IYFPY++++RRL + H  IEELL+S  +N EH+ +L D++KPI+F+MARLDRVKNLTGLVE Y KN+KLREL      V++G    E +S+D ++ AE++K + SLI Q  +      I +   R RNG L       K  F+      AFG+ VV +
Sbjct:  449 NHEDKYHFSSQFTADLIAMNNADFIITSTYQEIAGSKNNVGQYESHTAFTMPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSDKERRLTALHESIEELLFSAEQNDEHVGLLSDQSKPIIFSMARLDRVKNLTGLVECYAKNSKLRELAN---LVIVGGYIDENQSRDREEMAEIQK-MHSLIEQYDLHGEFRWIAAQMNRARNGELYRYIADTKGVFVQPAFYEAFGLTVVES 680          
BLAST of EY665195 vs. ExPASy Swiss-Prot
Match: SUS2_PEA (Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 1.227e-61
Identity = 139/256 (54.30%), Postives = 173/256 (67.58%), Query Frame = 1
Query:   10 ENLDDKHLFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVT*S*WVV----IGEKESKDLKDQAEMKKCIP-----SLIIQIEWPVPRIPSSKKRCRNGNLTGTFV-IKREFLGTMPE*AFGMVVVSTAWDC---TIWN*QGGP 738
            +  +DK+ FSCQFTADLIAMN+ DFIITST+QEIAG+K+T+GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM+IYFPY+++++RL + H  IE+LLY   +  E++  L DR+KPI+F+MARLDRVKN+TGLVE Y KN+KLRELV     VV    I  K+S D ++  E++K        +L  +  W    I +   R RNG L       K  F+      AFG+ VV  A  C   T     GGP
Sbjct:  454 KKFEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTIGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSDKEKRLTALHSSIEKLLYGTEQTDEYIGSLTDRSKPIIFSMARLDRVKNITGLVESYAKNSKLRELVN---LVVVAGYIDVKKSSDREEIEEIEKMHDLMKQYNLNGEFRW----ITAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVE-AMTCGLPTFATNHGGP 701          
BLAST of EY665195 vs. ExPASy Swiss-Prot
Match: SUSY_BETVU (Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS1 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 3.022e-60
Identity = 140/258 (54.26%), Postives = 173/258 (67.05%), Query Frame = 1
Query:   10 ENLDDKHLFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTE-EKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVT*S*WVVIG----EKESKDLKDQAEMKKCIP-----SLIIQIEWPVPRIPSSKKRCRNGNLTGTFVIKREFLGTMPE--*AFGMVVVSTAWDC---TIWN*QGGP 738
            +  +DK+ FSCQF+ADL+AMNH DFIITST+QEIAG+K+TVGQYESH AFT PGLYRVVHGIDVFDPKFNIVSPGADM+IYFP++E +   L S H  IE+LL+   +N+EH+ VL D +KPI+F+MARLDRVKN+TGLVE YGKNAKLREL      VV+      K+S D ++ AE++K        +L  Q  W    I S   R RNG L   ++  +  +   P    AFG+ VV  A  C   T     GGP
Sbjct:  396 KRFEDKYHFSCQFSADLMAMNHADFIITSTYQEIAGTKNTVGQYESHKAFTFPGLYRVVHGIDVFDPKFNIVSPGADMAIYFPFSEKDVTCLTSLHRLIEQLLFKPEQNEEHIGVLDDTSKPIIFSMARLDRVKNITGLVECYGKNAKLRELAN---LVVVAGYNDVKKSNDREEIAEIEKMHRLIQEYNLRGQFRW----IASQTNRVRNGELY-RYICDKGGIFAQPAFYEAFGLTVVE-AMTCGLPTFATCHGGP 644          
The following BLAST results are available for this feature:
BLAST of EY665195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
SUS2_ARATH9.078e-6558.47Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g... [more]
SUS2_PEA1.227e-6154.30Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 S... [more]
SUSY_BETVU3.022e-6054.26Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665195 ID=EY665195; Name=EY665195; organism=Citrus sinensis; type=EST; length=1087bp
AATTTACTGGAAAATTTGGATGACAAACACCTTTTCTCATGCCAATTTAC
AGCTGATCTTATAGCCATGAATCACACTGACTTCATCATCACCAGTACCT
TCCAAGAGATTGCTGGAAGTAAGGACACTGTTGGTCAGTATGAGAGTCAC
ACTGCTTTCACTCTTCCTGGACTCTACCGTGTTGTACATGGTATTGATGT
GTTTGATCCCAAGTTCAACATTGTATCTCCTGGTGCTGATATGAGCATTT
ACTTCCCCTACACTGAGGAGAAGAGAAGGCTGAAGTCTTTCCATCCCGAG
ATTGAGGAGTTGCTTTACAGTGATGTTGAGAATAAGGAACACTTATGTGT
GCTGAAAGACCGCAACAAGCCCATCCTGTTTACAATGGCAAGATTGGACC
GTGTTAAGAATTTGACTGGGCTTGTGGAGTGGTATGGAAAGAATGCTAAG
CTACGTGAGTTGGTAACTTAGTCGTAGTGGGTGGTGATAGGAGAAAAGGA
GTCCAAGGACTTGAAAGACCAGGCTGAAATGAAAAAATGTATCCCCTCTT
TGATCATACAAATTGAATGGCCAGTTCCAAGGATTCCCTCCTCAAAGAAA
CGGTGTAGGAACGGTAATTTGACCGGAACATTTGTGATAAAAAGGGAGTT
TTTGGGCACCATGCCTGAATAAGCCTTTGGTATGGTTGTTGTAAGCACTG
CCTGGGATTGCACAATTTGGAATTAGCAGGGGGGCCCCAAAAAATCTTTT
ACGGTGAAATGGGACCACATATCACTTCAAGGGAAAGGGGTGGAAATCCA
TTGGAACTCTTTGAAAAGCCAGGTAACCCCTTGCTGGAAAATAAACCTTG
GGCTCTACAGATATTATAAAAATATTTGAAACATTACACAAAAGCCGGGC
TAAGAGAGAGGGGTGGGGGAAGTGACATCAAGGATGGAACGAATGAAACA
CAACATGTGTTCACACCGTACTAGCTGTTTCCGTCGTGGAGGATGAAATT
GATTAGAGACACGGTCGAGAGTGTATCTATTGGGATATATATCGGTTCAG
AGGGATATACACATCTTTTTAATATATGATAATGTCA
back to top