EY665193

Overview
NameEY665193
Unique NameEY665193
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1015
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665193 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.404e-32
Identity = 61/81 (75.31%), Postives = 71/81 (87.65%), Query Frame = 1
Query:    1 DSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 243
            DSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+I+NK+ AWDD W+FWVGPFIGA +AA YH  ++RA   K+
Sbjct:  204 DSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALYHVIVIRAIPFKS 284          
BLAST of EY665193 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.404e-32
Identity = 61/81 (75.31%), Postives = 71/81 (87.65%), Query Frame = 1
Query:    1 DSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 243
            DSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK+ +WDD W+FWVGPFIGA +AA YH  ++RA   K+
Sbjct:  204 DSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKS 284          
BLAST of EY665193 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.404e-32
Identity = 61/81 (75.31%), Postives = 71/81 (87.65%), Query Frame = 1
Query:    1 DSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 243
            DSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK+ +WDD W+FWVGPFIGA +AA YH  ++RA   K+
Sbjct:  204 DSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKS 284          
BLAST of EY665193 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 1.193e-31
Identity = 60/81 (74.07%), Postives = 71/81 (87.65%), Query Frame = 1
Query:    1 DSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 243
            DSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+++NK+  W+D WIFWVGPFIGA +AA YHQ ++RA   K+
Sbjct:  208 DSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 288          
BLAST of EY665193 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.193e-31
Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = 1
Query:    1 DSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRA 228
            DSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN E AW+D WIFWVGP IGA +AA YHQ I+RA
Sbjct:  205 DSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNDEHAWNDHWIFWVGPMIGAALAAIYHQIIIRA 280          
BLAST of EY665193 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.193e-31
Identity = 61/81 (75.31%), Postives = 70/81 (86.42%), Query Frame = 1
Query:    1 DSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 243
            DSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA++YN+  AW+D WIFWVGPFIGA +AA YH  I+RA   K+
Sbjct:  206 DSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRSHAWNDHWIFWVGPFIGAALAAIYHVVIIRALPFKS 286          
BLAST of EY665193 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 3.471e-31
Identity = 60/81 (74.07%), Postives = 69/81 (85.19%), Query Frame = 1
Query:    1 DSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 243
            DSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA++YN+  AW D WIFWVGPFIGA +AA YH  ++RA   K+
Sbjct:  206 DSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRAHAWHDHWIFWVGPFIGAALAAIYHVVVIRAIPFKS 286          
BLAST of EY665193 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 7.732e-31
Identity = 62/81 (76.54%), Postives = 69/81 (85.19%), Query Frame = 1
Query:    1 DSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 243
            DSHVP+LAPLPIGFAVF+VHLAT+ ITGTGINPARS GAAVIYN+  AW D WIFWVGPFIGA +AA YHQ I+RA   K+
Sbjct:  205 DSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVIYNQHHAWADHWIFWVGPFIGAALAAIYHQVIIRAIPFKS 285          
BLAST of EY665193 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.249e-29
Identity = 59/81 (72.84%), Postives = 65/81 (80.25%), Query Frame = 1
Query:    1 DSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 243
            DSHVP LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IY+    W   WIFWVGPF GA +AA YHQ +LRA   K+
Sbjct:  212 DSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYDNPHGWHGHWIFWVGPFAGAALAAVYHQVVLRAIPFKS 292          
BLAST of EY665193 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 6.774e-27
Identity = 60/86 (69.77%), Postives = 63/86 (73.26%), Query Frame = 1
Query:    1 DSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI--YNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGS 252
            DSHVPVLAPLPIG AV +VHLATIPITGTGINPARS G A++      KAW   WIFWVGPF GA  A  YH YILR AA KA  S
Sbjct:  187 DSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGAAAAMIYHHYILRGAAAKAFAS 272          
The following BLAST results are available for this feature:
BLAST of EY665193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
PIP12_ARATH2.404e-3275.31Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP11_VICFA2.404e-3275.31Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH2.404e-3275.31Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP2_PEA1.193e-3174.07Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP1_SOLLC1.193e-3181.58Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP15_MAIZE1.193e-3175.31Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP13_ORYSJ3.471e-3174.07Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP11_MAIZE7.732e-3176.54Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP16_MAIZE3.249e-2972.84Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP28_ORYSJ6.774e-2769.77Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665193 ID=EY665193; Name=EY665193; organism=Citrus sinensis; type=EST; length=1015bp
GACTCCCATGTTCCGGTCTTGGCACCACTCCCCATTGGGTTTGCTGTGTT
CATGGTTCACTTGGCCACCATCCCCATCACCGGAACCGGCATCAACCCAG
CTAGGAGTTTTGGAGCTGCTGTGATCTACAACAAGGAGAAAGCCTGGGAT
GACCAATGGATCTTCTGGGTTGGACCATTCATTGGAGCTTTCGTTGCTGC
ATTCTACCACCAATACATTCTCAGGGCAGCAGCCATTAAGGCTCTTGGAT
CCTTCAGGAGCAATGCTTAAGCTTTAAATATGATGTCTGGTGCTTCCAAG
GTGAAAAATTTACAGCATGATCAGGAGTGCAAGTCTGTTACGAAGGCCCC
TTTAAGAAATCTCTTTTCAAGCTCTTTAGAGGGCCATTGAATTTGAGCTG
AGTTAAAGGGCTATTGAATTGTAAATATTTTGAACATTATGCATTTTATG
CCTATGCTTTATCTATGTGTAAGGGTGGAATTTGAAATCCCATTTAAATT
TTTTCCTTTGGGAGGGGATAAAAATGGGTGAGGGTGATAATAAATAATCC
AATTTCACCAAAATTTTCTAAAAAAAAATAAAAAAGGGCGGGCCGTCAAG
TGGAATCAAGCATATTATCACGGGTAGCAAACTCTTCTCCTTTTAATGTG
CCTGAAATACATTTACAGGCGGTTTATAAAAAGTCAGAATGGAAAAACTG
TCACACCATCTTATCCGCCTTAAACATAACCCCTTTCACCAGGGTAAGAG
AAGGATAGACGCCCCCTATACTCTCCCTATTATGCAAACTTTTATGCGTA
GAAATCCTCTATAACGAACTATATGTGGACTTTTCAATATTAATAAATAT
AATATTAATTCTTAAGAAATCCATATTTTATTATATGTCATGTTTGTATA
TGTGATAAAAAAAAGTTAATATATGAAGTACATGACGCTGATTTGCTTAA
AGAAAAGAAAGATATCACATAAGTAAATATATAACTTGAACGTGTCAAAT
CGAATTCTGCTACGT
back to top